Sander lucioperca (pikeperch): 116056071
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Entry
116056071 CDS
T07345
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116056071 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116056071 (irf1b)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116056071 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
116056071
NCBI-ProteinID:
XP_031164062
Ensembl:
ENSSLUG00000004356
LinkDB
All DBs
Position
13:21719957..21724722
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AA seq
302 aa
AA seq
DB search
MPVQRLRMRPWLEKQIESNSVSGLTWVDKDKKMFAVPWKHAARHGWELDKDACLFKQWAI
HTGKYVEGQTCDPKTWKANFRCAMNSLPDIEEVKDKSINKGHQAVRVFRMLPASPKSRDK
RSKAKETKSRKKRSVCKVEEDTDCNDTQSPMNESMTEETLSTQENTVDSTVHTEEKDSFV
SPSEVPEWSLSVEIGPGSFPCDIYQRFEVSPEHNSDYDYADDIIQICQQLEKDSNWMTNS
LDDRGFLSNEACTSPGSQWSESSSADDLDDLPQYTTLGSDFINPTDTVWNSFCQQIPRHS
DF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgcaaaggctgaggatgaggccatggctggagaagcagatcgagtccaattcc
gtctcgggtctgacttgggtggacaaggataagaaaatgttcgcagtcccctggaagcat
gcagctcgacacggctgggagctggacaaggatgcatgtctgttcaaacaatgggccatc
cacacagggaaatatgttgaaggtcagacctgtgacccaaagacatggaaagccaacttc
cgctgtgcaatgaactcactgcctgacatcgaggaggtgaaagacaagagcatcaacaaa
ggccaccaagctgtgcgcgtcttcaggatgctgcctgccagcccaaaatcgagagataaa
cgaagcaaagcaaaggaaacaaagtcaaggaagaagcgctcagtgtgtaaggtggaggaa
gacacggactgcaatgatactcagtctcccatgaatgagtcaatgacagaagaaactctg
tccactcaggagaacacagtcgacagcacagtgcacactgaggagaaagattcatttgtg
tctccatctgaggttccggaatggtctttgtcagttgaaatcggccctggaagctttcca
tgcgatatctatcagagatttgaggtttcacctgagcacaactccgattacgactatgca
gacgacattatccagatttgccagcaactggagaaagactcaaactggatgacaaacagt
ttagacgacagggggttcctgagcaatgaagcatgcaccagtccagggagccagtggagt
gaatcttcttcagccgatgacctagacgacttgccgcagtacacaactttgggctcagac
ttcataaatcccacagacacagtgtggaacagcttctgtcaacagataccaaggcactca
gatttttag
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integrated database retrieval system
