Sander lucioperca (pikeperch): 116056250
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Entry
116056250 CDS
T07345
Symbol
rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03010
Ribosome
sluc04120
Ubiquitin mediated proteolysis
sluc04137
Mitophagy - animal
sluc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
116056250 (rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116056250 (rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116056250 (rps27a)
04137 Mitophagy - animal
116056250 (rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sluc03011
]
116056250 (rps27a)
04121 Ubiquitin system [BR:
sluc04121
]
116056250 (rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116056250 (rps27a)
Ribosome [BR:
sluc03011
]
Ribosomal proteins
Eukaryotes
Small subunit
116056250 (rps27a)
Archaea
116056250 (rps27a)
Ubiquitin system [BR:
sluc04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116056250 (rps27a)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116056250 (rps27a)
Exosomal proteins of colorectal cancer cells
116056250 (rps27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
116056250
NCBI-ProteinID:
XP_031164272
Ensembl:
ENSSLUG00000009387
UniProt:
A0A8C9Y926
LinkDB
All DBs
Position
15:4414756..4422094
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPADECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtcaaaaccctcacggggaagaccataaccctcgaggttgagccttca
gatactattgaaaatgtcaaggccaagatccaggacaaagagggaatccctcctgatcag
cagaggttgatcttcgctgggaagcagctggaggacggacgcacgctgtccgactacaac
atccagaaggagtccacgctgcacttggtgctgaggctgcgcgggggggctaagaagagg
aagaagaagtcctacaccacccccaagaagaacaagcacaagaggaagaaggtcaagctc
gctgtgctcaaatactacaaggtggatgagaacggtaaaatccaccggctgaggcgcgag
tgtcctgctgatgagtgcggtgccggcgtcttcatggcgagccactttgaccgccactac
tgcgggaagtgctgcctgacctactgcttcaacaagcctgaggacaagtag
DBGET
integrated database retrieval system
