Sander lucioperca (pikeperch): 116056472
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Entry
116056472 CDS
T07345
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04060
Cytokine-cytokine receptor interaction
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116056472 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116056472 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116056472 (gdf5)
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Transforming growth factors (RSTK binding)
116056472 (gdf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
116056472
NCBI-ProteinID:
XP_031164459
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Position
6:complement(25005456..25020099)
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AA seq
598 aa
AA seq
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MNVATRLSLLLSCWTLLLHLRPALGSLGRTRPAEQQHQRLGEAAGRGEGQQTHGGTGRGT
GGSAPVWKPSPAVRITRIRAGPPLIKGETTVFKGKLATSASFSAPVNRAQLQKLQQQQQQ
PRDRGAVNLGRKDAAVRSWLPGGDAHIKAHAPAALSAHAAGREVETADVLVGGASSGKTP
GKVATRASEVAPRAVSAQKQPPQKQTAGPQAQRGFSSKAQKVKEQEAHPKQPLVTPHDYM
LSLYWSLSSGELNGSALHEAGLANTITSFVDKGQDERGPQLRRQRYHFNVSSLERDGLLG
AELRILRKRPSDLRRISMGGSTAADGAGGGIMSSPSLKLYTCASGKQPAALLQMKTMEDV
LGGGGFGNKWEVFDIWKVFKGFKTQHSQQLCFELEALEHRGGRPMDLRTLGFARPGRTNK
EKAFFLVFGKSKKRDLFYNEIKARSGHDNKTVYEYLFTQRRMRRAPAARGPKKLQQPPAP
HTLPQHQVVKTQTRPRCNRRRLHVNFKEMGWDDWIIAPLEYEAFHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPESTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgcgacgcgtctctctcttctgctgagctgctggactctgctgcttcacctg
cgtcccgcgctcgggtccctcggccgaaccagacccgcggagcagcaacaccagcggctc
ggagaggcagcggggcgcggggaaggacagcagacccacggaggaaccggcagaggaacc
ggcgggtccgcaccagtgtggaaaccctctccggcggtgcggatcacgcgtatccgcgcg
ggtccgccgttaatcaaaggcgagacgaccgttttcaaaggcaaactcgcgacctctgcg
tccttttcggcgccggtgaaccgcgcgcagctgcagaagctgcagcagcagcagcagcag
ccacgggacagaggagcagtcaatttaggacgcaaagacgctgctgtgcgctcctggctc
cccggcggggatgctcacattaaagcgcacgctcccgcggctcttagcgcgcacgctgca
ggcagagaagtcgagactgcggatgttcttgttggaggtgcctcatcggggaagacaccg
gggaaagttgctacaagggcgagcgaagtagctccaagagccgtcagtgcgcaaaaacag
ccgccgcagaagcagaccgcgggtccgcaggcgcagcggggattcagcagcaaagctcag
aaagtcaaggagcaggaggcgcatcccaagcagccgctggttacccctcacgactacatg
ctgtctctgtactggtctctgtccagcggggagctgaacggcagcgcactgcacgaagcg
ggactggccaacaccatcaccagcttcgtggataaaggacaagatgagcgtgggccccag
ctgagacggcagaggtatcacttcaacgtcagctctctggaacgagacgggctcctgggg
gccgagctgcgcatcctgaggaagcgcccatctgacctccgcaggatctcaatgggggga
tccacagccgctgacggagcgggtggaggaataatgtcatccccgtccctgaagctgtac
acctgcgcgtcgggtaaacaaccggctgctctgctccagatgaagaccatggaggatgtg
ctcggcggaggcggtttcggcaacaaatgggaagtgtttgacatctggaaagtcttcaag
ggctttaaaacccagcactcccagcagctgtgcttcgaactggaggccttggagcaccgg
ggcggtcgccccatggacctgcgcactctggggttcgcccggcccggcaggaccaacaag
gaaaaggccttcttccttgtgtttggcaaaagcaagaagcgcgaccttttctacaacgag
atcaaagcgcggtcaggccatgacaacaaaaccgtctacgaatacctgttcacccagcgg
cgaatgcgccgagctccggctgcaagggggcccaaaaaactgcagcagccccctgcaccg
cacaccctgccccaacatcaggtggtgaagacgcagacgaggccgcggtgcaaccgcaga
cgactccacgtgaacttcaaggagatgggctgggatgactggatcatcgcgccgctggag
tacgaagcgtttcactgcgacggcgtctgcgacttccccatccgctcacacctggagccg
accaaccacgccatcatacagaccctgatgaactcgatggacccggagtcgacgccgccg
acctgctgcgtcccgacgcgactcagcccgatcagcatcctctacatcgactcggccaac
aacgtcgtctacaagcagtatgaggacatggtggtggagtcatgtggttgcaggtag
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