Sander lucioperca (pikeperch): 116056693
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Entry
116056693 CDS
T07345
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
116056693 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116056693 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116056693 (clip1a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116056693 (clip1a)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
116056693 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
116056693
NCBI-ProteinID:
XP_031164823
Ensembl:
ENSSLUG00000010657
LinkDB
All DBs
Position
2:complement(12839848..12868986)
Genome browser
AA seq
2254 aa
AA seq
DB search
MSTARPSGIKGPSKIARPPGTAAPKTNPSTAGVKAVAADKSAASASGGDAGESAGEIFQI
GERVWVNGNKPGYIQFLGEAQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEALRGIFTR
PSKLSRTEGEANGTETAPPSRAASPTPSVGSVSSHTPATKSTSPTTATKKASSTTPATPA
TPSSNLPRTNSESVSNLSETGSVKKGERELKMGDRVLVGGTKAGVVRFLGETDFAKGEWC
GVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKVVATP
SGLKRSPSASSISTMSSVASSVSAKPSRTGLLTETSSRYNRKISGTTALQEALKEKQQHI
EQLMAERDMERAEVAKATGHVGEMEQEIGLLRVDQEQMEAKMDQLRALVEAADKDKVELL
NQLEEERRKVEDLQFRVEEACITKGDLESNFNTVGSDYSLSSQTQTRLEHAHIKELEQSL
LFEKTKAEKLQRELEDTRVATVSERSRIMDLERDLSLRTREVADLQLRLGTQQGSEDSNS
TVSPLLEEINSLRDQLASQEAKQKEELKKYKEKLEAQEKTHSEAAAQVQATSVRLSGDNE
QLQMRLSHAEKENADIIEQWRSKLESAIASHQQAMEELKVSFSKGSGAQTEQLIETKGAL
EKLNIEHKLALEEAGAKHEADAVAWTREKQALKAQLLSLIEDKERLEESLRSSVERAEEQ
HLVEMEDVLGKLHAAELRVKELEEKEGMSAQQAQDKDRQTKEQMSEIVALRSQVAQGNQE
LVTLKSQLEMVQSQGNNQGAMVSELSSQLEGRQQEVLSLQQSLTTVQQEKDVLEQELGGL
KQRLAESTEEQTKSSNTMQETLEKLSKKEEQCTSLITESESLRTQLSGLERKLKAADERL
EQLSKDKYKLENDISDMMKTSGDSSVQLTKMNEDLIQKERRLEELQSQLSEEKEKAVHSN
EQLQQEQSRREQELKETRDTHQSQISSLQDKIANLEKTVKQGETLVEELKASQEKSLSQA
SELHVKELEVLQCQVDKWKQELSSSTDKTQELEKLVSELQPYKEQVQCLSAELDSYKHDV
EHLSKKLEKQSLDLENMCKESEDVKAEKGKLEKRLSDVQTKLSALEISHQELSVQNEELL
ITRDKLSKHQEDLLANNKCSDEERISLSKELEKLKYLFHEVQTENNNLKNAKSEHQSQIE
ELQRQNSEKNDLLLKHQQDIQQIEAKKKQLYDDYENVCKEKHQLEDNLNESRSKLTSEKD
NLILERDSARNAKKSLDAKNAELQAKLKSLNLEKEDLTMKNAQLQALTETLTNEKVAMSS
EINAVVLEKKSLETVKEELQNKLSVAKKDLESSVRECDELKASKMSLAQMLEEFKTSSQV
TDSERLHLLQEKEDLLAIQRKVCNEKEELIGEIEELKEKLTVSTEQLSKSNEKFKEALSS
FEQEKQAFRLQNSEIEMALHVIRKEKMSLDSALEQQKMDYERLAGEKGELEEKHTKTISE
NNALSLERDKLASDIRTNKDQLDSYSRANDRFTQEKSHLTAMLEETKRQKDKAEAEMASL
KREKADLQNELQKHNSDIEILEKGKTELVQEHSKLKMEFEKANSELVQQVDNLTKDCQRL
QLLQTEADNKAQSLQKENQGLLQEIQELKCQTESITGAKHLLETQLQAESSDRSKAISDK
DGLSKQIKELQKTLSEVSQENKDISSSLTNANEQKKSFMVDIEALKTQLKQREQETIQLI
EDKKQLLSKLEDIGKQMTVLTTEKEDLLAAQCKLEQNISSFHTSQENWLTEGSKLLGEIE
KLRASQTQLEVDVKGLQTEKELLEKQYKNAVAEISASAVVKEEISTSISNLTAQKDALQV
ERDEATQQIRQLESQLKNAISKQLEATEASGKTAEALEQLTKEKADLMQEKNEAQSLLEE
LRSSKQKMETQLKTLKKDNSKYQEDLNVSKEQLCIETQRTESLCQEIEELKEVVTVKTQS
LQMLQDENSKLTRELDNHHKEQSELVKLKDEHSKLKKQLKQSLPNNAFSESSLKEQFEKE
KAALQQSIHKNSAFISEKEQQVEKLMSELVGLHGERASVETLQGTIQALERDKANLQGRV
QRLEKDLAAGPDTKSSGDAVLDQLREDKETAESQAAIEFLNSVIIDLQRKNEELKDKLEK
MATAALNGNNSSELDNYDSHDKEPVKKKAPPRLFCDICDCFDLHDTEDCPTQMQMPDSPP
HTTYHGNKGEERSYCDICEVFGHWTESCNDDQTF
NT seq
6765 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccaggccaagtgggatcaaagggcccagcaagatagctaggccacctggg
acagcagcccccaagaccaaccccagcacagcgggagttaaagctgttgcggccgacaaa
tcagctgcaagtgccagtggaggagatgctggggagagtgctggggagatcttccagatt
ggggagcgagtatgggtaaatgggaataagccaggctacatacagtttttgggagaggca
cagtttgctccaggacagtgggcagggattgttctggatgagccaattgggaagaatgat
gggtcggtggcaggggtgcgctacttccagtgcgaagccctgcgaggaatttttacccgg
ccatccaagttgtctcgcacagagggggaggctaacggaactgagacagcacccccctcc
cgtgctgcatcacccactccttcagttggcagcgtatcctcgcatacacctgccacaaag
tcaacatcacctaccactgcaaccaagaaggcctcctccacgacaccagctacgccagct
acaccatcctccaacctcccacgcacaaacagcgaatctgtctccaacctctccgagact
ggatcagtcaagaagggggaaagggagctgaagatgggtgacagagtattggttggtggt
acaaaggcaggagtggtacgtttccttggagaaaccgattttgccaaaggcgagtggtgt
ggtgtggaattggatgagcccttaggaaagaatgacggggcagtggcgggcacaagatat
tttcagtgccaacccaagtatggtttatttgctccagtgcacaaagtcacacgcattggc
ttcccttccaccacgccagccaaagcaaaaacaacggttcggaaagtagtggccacacca
tcagggctaaagcgaagccctagtgcctcctccatcagtaccatgagctctgtggcatcc
tctgtcagtgccaagcccagccgcacaggcctgctaacggagacatcatcacggtacaat
cgtaagatttcaggcaccacagccctgcaggaggccctaaaggagaagcagcagcacatt
gagcagctaatggctgagagggacatggagagagctgaagttgccaaggccactggccat
gttggagagatggagcaagaaattggcctgctgagggttgatcaggagcagatggaggcc
aagatggatcagttacgtgccttagtagaagctgcagacaaagacaaagtggagctgctg
aatcagctggaggaggagcgtaggaaggtggaggaccttcagtttcgcgtagaggaagct
tgcattaccaaaggagacctggagagtaattttaatacagtaggctctgattactcattg
tcttctcaaacgcagaccagactggagcatgcccacattaaggagcttgaacagagccta
ctctttgaaaagaccaaagctgagaaactccaaagagagttagaagacactagggttgct
actgtgtcggaaagatctcgtattatggaccttgagagggacctttcactgcgaacaaga
gaggtagcagacctacagctgcgtcttgggacccaacagggctctgaggactcaaactct
accgtttctccccttctggaagaaataaactctctgagagatcagttggcttcccaagaa
gctaagcagaaagaagagctgaaaaagtacaaggagaagcttgaagctcaagaaaagacc
catagtgaggccgctgcccaggttcaagctacatctgtaaggctctctggtgacaacgag
cagttgcagatgcgcttaagccatgctgagaaagagaatgctgacattattgaacagtgg
cgttccaagttggagtctgccattgcctctcaccagcaagccatggaggagctaaaggtg
tccttcagcaaaggctcaggtgcccagacagaacaacttatcgaaaccaaaggtgctcta
gagaagctgaacatagagcacaagttggctctcgaggaggctggagccaaacatgaggct
gatgctgtagcttggactcgggagaagcaggcactgaaggcacagctgttgtctttgatt
gaggacaaggagcgactggaggagtccctgcggtccagcgttgaaagagcagaggagcag
caccttgtggagatggaggatgttcttggaaaacttcatgctgctgagcttagagtgaag
gagcttgaggagaaagaagggatgtcggcacaacaggcccaagacaaggaccgacaaacc
aaagaacagatgtcagaaattgtggctctgcgcagccaagtagcacaaggtaaccaggag
cttgtgaccctgaagagtcaattagagatggttcagagccaagggaacaaccagggtgcc
atggttagtgaattgagctcacagttggagggccgacagcaggaagtcctctctttacag
cagagtctgacaactgtacagcaggagaaggacgtcctggaacaagagcttggaggcctg
aaacaaaggttggctgaaagcacagaggagcagactaaatcatcaaacactatgcaagaa
acacttgagaagctcagtaagaaagaagagcagtgcacatctctgatcacagaatcagag
tctctaagaactcaactttccgggctagagagaaagctgaaggctgcagatgaacggctt
gagcagctttcaaaggacaaatacaagctggaaaatgatatttcagacatgatgaagaca
tctggtgatagttcagtacagctgaccaaaatgaatgaagatcttatacagaaagaaagg
aggcttgaggagttacagagtcaactatcagaggagaaggagaaggcggtgcactcgaat
gaacaactccagcaggaacagtcccgcagagagcaggagctgaaagagaccagagataca
catcagtctcaaataagtagccttcaggacaagatcgctaacttggagaagactgttaaa
cagggtgagactctggttgaggagctcaaggcctcacaggagaaatccttgtctcaggct
tcagagctccatgtgaaggaacttgaggttctccaatgtcaggttgacaagtggaagcag
gagctctcctcctccacggacaaaacccaggagctggagaagttggtatctgagctgcag
ccatacaaggaacaggttcagtgtctttctgctgagcttgactcctacaagcatgatgtt
gaacatttgtccaaaaaactggaaaagcagagtctagatctggaaaatatgtgtaaggaa
agtgaggatgtaaaggctgagaaaggcaaactggaaaaacggctttcagatgtgcagact
aagctctctgcccttgagattagtcaccaagagctttcagtccagaacgaagaactgcta
ataaccagagataagctttcaaaacatcaagaggacctacttgccaacaacaagtgctct
gatgaagaaaggatttcattgagtaaggagttggagaagctgaaatatctttttcacgaa
gttcagactgaaaacaacaacctgaaaaatgctaaaagtgaacaccagtctcaaattgag
gagcttcaaagacaaaattcagagaagaatgacttgctcctaaagcatcagcaggacatc
cagcaaatcgaggctaaaaagaagcaactatatgacgattatgaaaatgtttgcaaagag
aaacaccagcttgaagacaacctcaatgaaagcaggtcaaagctcacaagtgagaaggac
aatctaattttagagagagattctgccagaaatgccaaaaaatctcttgatgccaagaat
gcagagttgcaggcaaaacttaagtccttgaacttagaaaaagaagatcttacaatgaag
aacgcccagctgcaggccctcacagaaacactgacaaatgagaaggtggcgatgtcttct
gaaatcaatgctgtcgtgttggagaaaaagagccttgagacggtgaaggaggagctccag
aataaactcagtgttgccaagaaagatttagagagctctgtccgtgaatgtgatgaactt
aaagcctccaaaatgagcctggcccaaatgctggaggagttcaagacaagcagtcaggtg
actgattctgagaggcttcaccttctgcaggagaaagaagacttacttgcaatccaaaga
aaagtctgtaatgagaaggaagagctcattggagagatagaagaattaaaagagaagctt
acagtctcaacagaacaactatcaaagtccaacgagaaatttaaagaagcattatcatct
tttgagcaagaaaagcaagcatttcgccttcagaattctgaaattgagatggctctacat
gttatacgcaaagaaaagatgagcctggattcagcactagagcagcagaagatggattat
gagcgtttggcaggagagaagggagaattggaagagaagcacacaaaaaccatatctgaa
aataatgctctttctcttgagcgtgataagctagctagtgatatccgaacaaataaggac
cagttagatagttactccagagctaatgaccgctttactcaagagaagtctcatttaaca
gcaatgctagaggaaaccaaacgccagaaagacaaagctgaagcagagatggcctctttg
aaacgagaaaaggctgacctacaaaatgagctgcagaaacataactctgatattgaaatt
cttgaaaagggcaaaactgaacttgttcaagagcacagtaaactaaaaatggagtttgag
aaggctaattcagagcttgttcaacaggttgataatcttaccaaagattgtcagcgtctg
caattgttgcagactgaagctgacaacaaagcacagtccttgcagaaagagaaccagggt
ctgcttcaggagatccaggagttaaaatgtcagactgaatcaataacaggggccaagcac
cttcttgagacccagctacaggcggagtccagtgatcggagtaaagcgatatctgacaag
gatggtctctccaaacaaatcaaggagctgcagaaaacgttgtcagaagtttcacaagaa
aataaagacatttcatctagccttacaaatgctaatgagcaaaagaagtcttttatggtg
gatattgaggctttgaaaacgcaattgaagcagcgagagcaagaaactattcagttgata
gaagataaaaaacagctattatctaagcttgaggatataggcaagcagatgaccgtcctg
accacagagaaggaagaccttttagctgcacagtgtaaactggagcagaacatttcttct
ttccatacaagccaagaaaattggctcaccgaagggtcaaaactcctaggagagatagaa
aagttgcgcgctagccagacacaactagaagttgatgtcaagggtctacaaaccgaaaaa
gaacttttggaaaagcaatacaagaatgctgttgcggagatatcggcttctgccgttgtg
aaagaagagatttccaccagcatctcaaatctaaccgctcagaaggatgccctgcaggtg
gagagagatgaagccacccagcaaatcaggcagctggagtcccaactaaaaaatgccatt
tctaagcagcttgaggctacagaggcctctggcaagactgctgaggctctggaacagctg
acaaaagagaaggccgatttgatgcaggagaagaacgaagcccaatctctattggaagaa
ctccggagctccaagcagaagatggagacacagctgaaaacattgaagaaagataattcc
aagtaccaggaagatctgaatgtatccaaagagcagctttgcatagaaactcagaggact
gagagcctgtgccaggaaattgaggagcttaaagaagtcgttactgtaaagacacagtcc
ctgcagatgctgcaagatgagaacagcaagctgactcgggagcttgataaccatcacaaa
gagcagagcgaacttgtgaagctcaaggatgagcactcaaaactcaaaaaacagttgaag
caaagcctgccaaataatgccttcagtgagagcagcttgaaggagcagtttgagaaggag
aaggctgccctccaacagtccatccataaaaacagtgccttcatttcagaaaaggagcag
caggtggaaaagctgatgagcgagctggttggactgcatggggaaagggcctcagttgag
acactgcagggtacaattcaggccttggagcgggacaaggctaatctacagggccgtgtt
cagagactggagaaggacctggctgcagggcctgacaccaagtcctcaggtgatgcagtt
ttggaccaactaagggaagataaggagactgcagagagtcaggcagcgattgagttcctg
aattcagtcatcattgacctccagaggaaaaatgaggagcttaaggacaaattggagaaa
atggcaactgctgctctcaatgggaataattcaagtgagctggataactatgacagccat
gacaaggaacccgtgaagaagaaggctcctcccaggctgttctgtgacatctgcgactgc
tttgacctccatgacaccgaggactgtcccacacaaatgcagatgcccgactcccctcca
cacaccacctaccacggcaataagggcgaagaacggtcctactgcgatatctgtgaggtc
tttggccactggaccgaatcctgtaatgatgaccagaccttttaa
DBGET
integrated database retrieval system
