Sander lucioperca (pikeperch): 116056776
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Entry
116056776 CDS
T07345
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116056776 (pole)
03410 Base excision repair
116056776 (pole)
03420 Nucleotide excision repair
116056776 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116056776 (pole)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116056776 (pole)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116056776 (pole)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116056776 (pole)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116056776 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CpXC
APP_N
Motif
Other DBs
NCBI-GeneID:
116056776
NCBI-ProteinID:
XP_031164962
Ensembl:
ENSSLUG00000025098
LinkDB
All DBs
Position
2:14322366..14339534
Genome browser
AA seq
2295 aa
AA seq
DB search
MVLQNSGRYKAERGQAAGDQENQDDGSSMSALKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYM
SRKFQGKVAKLEVIPKEDLDLPNHLVGLKRSYIKLSFSTVDELIKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGNVTSAEEDGMSKNISDQLDNILDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLNMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLEQVTNFNEV
CEEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGQIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHNLNREEQAKHE
KKRLADYCKRAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQESGDAAEIKRCINMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVEPASVTYNVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGTSLEEVYASVAKVADYWLDVLYS
KAANMPDTELFELISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQAADIEDFGMPARPLQPAILISTKRKRASQGEDSQVESQDVELTQSWREILGSPPP
MGKTREERLVWLRYHKKKWELQLRQRKERKKKRRLLDGEAQPVGGGVIRGGPATGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGHDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKHVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLTNLYTAERTALLEKTTEELLPPEKHNFEVRAEN
DAKAINRALQRILLNYKEERRGPTLIAVQSNWDLRRLAAGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYFHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRL
GSTVVYGNFNRIMLCTKKRRIDDAIGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPSSILYGEEGAKQKKKSRGEGDEEGSDDEDEDEAVVEEDEGDGETDEVEE
LIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQAS
QQAVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVNQPSEMFPVLPGSH
LPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSGEAQFCDPCNSYILP
EVICHHCNFCRDLDLCRDPSVAQDGSVLPQWFCSNCQAQYETESIEMALVEALKKKLMSY
TLQDLVCTKCKGVKEANMPLYCKCAGDFDLTFPAKSFSEQITVFRNVASHYKMSFLDETL
DWLLVMSPQISQNAH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacggtacaaagcggagcgaggacaagctgcaggagaccag
gaaaaccaggacgatggatcttccatgtcggccctcaagcggctggagcgcagtcagttc
accgacgagatggacgcccgcttcggtttcgacaggatgaaggagccgggggagaaaaca
ggctggctgatcaacatgcatcctactgagatcctggatgatgacaagaggatgatcagt
gctgtggactattatttcatacaggaggatggaagcaggtttaaggtggccctcccattt
aagccatatttttacattgccactaaaaagaactgcgaaagagaagtaatctcatacatg
tctaggaagtttcaaggaaaggtggcgaagcttgaagttatcccaaaagaggacctagat
ctgccaaaccatctagttggactgaagagaagctacatcaagctttcattcagcaccgtg
gacgagctcatcaaagtcaagcgcgagatctcgccggctgtacgcaagaacagagagagg
gagcagtccaacgacgcctacacctcaatgttatcaagtgccttatcgggtggcaatgtg
acctcagcagaggaagacgggatgtcaaagaatatttccgaccagttagacaacatattg
gacatgagagagtatgacgtgccctatcatgtgcgattgtccattgacctcaagatccac
gtggctcactggtataatgttcgatacagaggcagcgcctacccaccagagattgtacgg
agagatgatcttgtggagcgccccgaccctgttgttttggctttcgacatcgagaccacc
aaacttccactgaaattcccagacgcagaaagcgatcagattatgatgatctcttacatg
attgatggacaggggtttctaatcacaaacagagagattgtctctgagaacattgaagat
tttgagtttactcccaaaccggaatatgaagggcctttcaccgtttttaacgaagatgat
gaggcggcgctcattcagaggtggtttgatcacgttcaagaaaccaagcctaacatcttt
gtaacctacaatggtgacttctttgactggccttttgttgagactcgggccgcccttcat
ggattgaacatgcacagggagatcggtttccagaaggataaccagggagagtacaagtcc
agtcaagctatccacatggactgcttaaggtgggtaaagagagacagctacctgccggtg
gggagtcataatctgaaggcagcagcgaaggctaaattgggctacgacccagtggagctg
gacccggaggagatgtgccgcatggcaactgaggagccacagactttagccacctactct
gtgtcagatgctgtggccacatattacctgtatatgaaatatgttcaccccttcatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggacc
ttgtgtgaagctctgctcatggtgcaggccttccacgcaaacattgtcttccccaacaag
caggagcaggtctttaacaaactgacagacgacggccacgtcatggactctgagacgtac
gtgggcggccatgtggaggcgctggagtcaggagtgttccgcagtgacatcccctgccgt
tttaagatgaacccagctgcgtttgacttcctgctgcaaagagttgagaagaccatgcgc
catgccattgaggaggaggagaaaatccctttggagcaagtcaccaactttaatgaggtt
tgcgaggaaatcaaaaagaagctgacttccctgaaggaggtcccaaacaggattgaatgc
ccgctcatctaccatctggacgttggggcgatgtaccccaatatcatcctcaccaaccgc
ctgcagccttccgctatggttgatgaggccacttgtgctgcctgtgactttaacaagcct
ggtgctacctgccagaggaggatggcctggcaatggagagggcaaatcatgcctgctagc
cgcagtgagttccaccgcatccagcagcagcttgagtctgagaagttcccgccatttttc
cccaacggtccgcctcgggccttccacaacctcaacagagaggagcaggctaaacatgag
aagaaacgtctggcagactactgtaagagggcctataagaagacacacgtcacccggcta
gaggagcgagtcaccaccatctgtcagagagaaaactccttctatgtcgacacagtaaga
gccttcagagatcgtcgttatgaattcaaaggactccacaaggtgtggaagaagaaactg
tcagcagctcaggagagcggagacgctgctgagataaagcgctgcataaacatggagatc
ctgtacgattctcttcagctagcgcacaagtgtattctcaactctttctacggctacgtc
atgcggaaaggggcgcgctggtactccatggagatggctggcatcgtgtgctacactgga
gccaacatcatcactcaggccagagagctcatcgaacaaatagggaggcccctggagttg
gacactgacggtatctggtgtgtcctgcccaacacctttcctgagaactttgtggtgaaa
accagcaatgagaagaagcccaaggtgaccatctcttacccaggggccatgctgaacatc
atggtgaaggagggattcaccaacgatcagtaccacgagctggtggagcccgcgtctgtc
acctacaacgtcaggtcggagaacagcatcttctttgaggtggatggaccgtacctggcc
atgatcctgcctgcctccaaggaggaagggaagaagctgaagaaaaggtacgctgtgttt
aatgaggacggctctctggctgagctgaagggattcgaaatcaagagaagaggagagctc
cagctcattaagatttttcagtcgtcagtgtttgaggcttttctcaaaggtacctctctg
gaggaggtgtacgcctctgtggccaaagtggctgactactggttggatgttctgtacagc
aaggctgccaacatgccagatacggagctgtttgaactcatttcagagaatcgttcgatg
tccagaaggctggaggactacggagagcagaagtccacttctatcagcacagctaagaga
ctggctgagttcctgggagaccaaatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccgaaaacccgagggttcacctgtcacagaaagagccattcctctggccatcttc
caggcagagcccagtgtgaagaaacatttccttcgtaagtggttgaagatgcccagcctg
catgacttggacatccgctctatccttgattggagttattacatagaaaggttgggtagt
gccattcagaaaatcatcacaattcctgcagctcttcaacaggtgaagaatccggtaccc
agagtgaggcaccctgactggcttcacaagaaactcttggagaaaaatgatatctacaag
caaaagaaaatcagtgagctgttcaccagtgagggcaagagacaggtggcccatcagcct
cttgaagcaggccaagccgcagacatagaggactttgggatgccagccagacctctgcag
ccagccatactcatcagcactaagcggaagcgggcttctcagggagaggacagccaggtg
gagtctcaggatgtcgagctcactcagtcctggagagagatcctggggtcacccccacct
atgggaaagacacgggaggagcgtctagtgtggctgcgttaccataagaagaagtgggag
ctgcagctgaggcagaggaaggagagaaagaagaagaggaggctgcttgatggtgaagct
caacccgtagggggaggagtgatccgaggtggacccgccaccggcctgggaagtttcctc
cgcagaacagcacgcagcatcctggacatgccatggcaaattgtacagattgcagagact
agtcaccctggtctgtacaagttgtgggctgtgattggacatgacctccattgcatgaag
ctcaacatcccacgtgtcttctatgtcaatcaaaaagtcccaaaacaggaggagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctctaacatagtgtactacctttatgag
tactgtgtaccagaggacatgtaccaggagcacatcaatgagatcaacgctgacctgtct
gccccagacattgaaggagtctatgaaacacaggtcccgttgctgtttcgtgcactggtg
cagcttgggtgtgtgtgcatggtcaataaacatgttgtgagggatctggctggcagggag
gctgacacttttgacctggagcatctggagatgaggtctctggcccagttcagctacctg
gaacctgggagtgttcgccacatgtacctgtatcatcacagtcagggtcacaaagctctg
tttggcctcttcatcccctctcagcgcaaagccagcatctttgtcctggacacagtcaga
agcaaccagatgcccaacctgactaacctctacacagctgaacgcactgctctcctggag
aagacaactgaggagctcctgcctccagagaaacataactttgaggtccgagctgaaaac
gacgcaaaggctattaaccgcgctctgcaacgcatactgctgaactacaaggaggagcgc
cgtgggcccaccctcatcgcggtgcagtcaaactgggatttgcgacgtttggcagcaggg
atgccagtgcttgaggagtttccagtcgttccagtacacgtggttgatgagatcagctat
aacgtgctggactggcaacgccacggtgcccggcgcatgatccgccactacctcaaccta
gacagctgcctgtcacaggctttcgacatggccaggtatttccatttacctgtggggaac
ttgcctcaggatgtgtccatctttggctcagacttgttcctggcaagacatctacggaaa
cacaaccacctgctgtggctctcacccacagccaggcccgacctcggaggaaaagaggct
gatgacagtcgtctggttatggaaagtgatgacaggggctctgtggagatcaatgctcaa
ggatgctattccacagtgtgtgtggagttggacctgcagagcctggcggtgaacaccatc
ctccaatcacagcatgtcaatgacatggagggcggagctagtctgggtgtcagttttgat
gtgatccagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctctc
gctagctatgatgagactgctctctgttccaacaccttcaggatcttgaagagcatggtg
gttggatgggtcagagagatcacccagtatcacaacgtgtatgcagacaaccaggtgatg
cacttctaccgctggctgcgctcccccagctctctgctctatgaccccgcactgcaccgc
accttgcacaacatgatgaagaaggtgtttctacagttggtttcagagttcaaacgcctg
ggctcgactgtggtgtatggaaacttcaacaggatcatgttgtgcacaaagaaaaggagg
atagatgatgccataggctatgtagaatacatcaccaaaagcatccactccagagaaatc
ttccactctttgtccatctctttctcccgatgctgggagttcctgctgtggatggacccg
gccaactacggcggcgtgaagggcaaactgccctccagcatcctgtacggagaggaagga
gccaaacagaagaaaaagagccgaggggagggagatgaggaaggcagtgatgatgaagac
gaggatgaagccgttgtggaggaagatgaaggtgatggagagacagacgaggtggaggag
ctgattgagagcaactggaacatcatgcagtatctgccccaaactgcctcctgtcagaaa
tacttcctcatgattgtctccgcctacattgcagccgtctaccacagcatgaaagaggag
ctgagacgcaacgcacctggagcaacaccagtcaagagacgtggaggcagccaggcttcc
cagcaggccgtgggggatttgagtgctcttcctggaatgatctccttctctcaggaatat
gtgtctagtgagttgacacagaactttttcaccatcactcaaaaaatccagaagaaagtg
acgggtaccaggagtgtcaaccagccctcagagatgttccccgtccttcctggatcccac
ctgccactcaacaacccagcactggagtttatcaaatatgtctgccaggtcctttcactg
gatgccaacatagtgaaccaggtgaacaagctgaagagagacctcctgcgtctggtggac
gtgggagagttttccggggaagcccagttctgtgacccgtgtaactcctacatcctacca
gaggtcatctgccaccactgcaatttctgtcgtgacctcgacctctgcagggacccatct
gtggcacaagatggatcggttttgcctcagtggttctgctccaactgccaggcgcagtat
gagactgagtctattgagatggctctggtggaggctctgaagaagaaactgatgagctac
actctgcaggacctggtgtgtacaaaatgtaaaggagtgaaggaagcaaacatgcccctg
tactgcaaatgtgccggagactttgacctcactttcccagccaagagcttctctgagcag
atcacagtgtttcggaacgtagcgtcccactacaaaatgagcttcctggacgagaccctt
gactggttgcttgtcatgagcccacagatcagccagaacgctcactga
DBGET
integrated database retrieval system
