Sander lucioperca (pikeperch): 116056956
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Entry
116056956 CDS
T07345
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116056956 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116056956 (nup50)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116056956 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116056956
NCBI-ProteinID:
XP_031165211
Ensembl:
ENSSLUG00000008021
LinkDB
All DBs
Position
20:complement(21593655..21608722)
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AA seq
474 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFCVASEDVLKSRAIKKAKRRNIGESEGSGSFKGF
KGFSLTSAAPAVSGGSAPTAFSGFGNGGGFKGLSTLTNGNSIAPSFGGFSSPAVTSTPTP
GLTFNGPASADITAKQTNGAAPSPTQSSSLSSSSVVINGNNKEYSRQLTALNCSVRDWIT
KHVNGNPLCDLNPIFRDYERHLASIERQYGAGGAAVEGGGSEEKKQQGGMLPTRASPPPP
LPSSSSSSSSSSGSRSSPAAPAPAATLFSFGKNSTEDSATPAAPMNTGVTFNFGQKVDSS
VLGCVGSKTTPPGFSFGSGASSLFGAPGSFGAKSEDARPADVNGDEETEEPPKPEVKEVK
EDNAFYSKKCKLFYKKESEFKEKGVGTLHLKHTQDGKIQMIIRADTNLGNILLNIMLQAS
MPCSRVGKNNVMVVCVPNPPVDDKDPGSPVPLLIRVKTAEDADELHKTLEEKKG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgacaaagagctaacggacaggaactgggatcaggaggaggag
ggagaggaggccgggacgttttgtgttgcaagtgaagatgtgttgaagagccgggcgatt
aagaaggccaaacgcagaaatattggagagagcgagggtagtggatccttcaaaggtttt
aaaggcttctctctgacctcggcggcaccggcggtgagcggaggctcggctccaacggcg
ttttctggttttgggaacggaggcggcttcaagggcctcagcactctgaccaacggaaac
agcatcgcgccttccttcggaggcttctcatctcccgctgtaacgtccactcctacgcct
ggtctcacattcaatggccccgcctccgctgacatcacggccaagcagaccaatggcgcg
gccccgagcccgactcaaagctcgagcctcagcagcagcagtgttgtcatcaacggcaac
aacaaggagtacagccgacagctcacggctctcaactgctccgtgcgcgactggatcacc
aagcacgtgaacggcaaccctctgtgtgatctcaaccccatcttcagggattacgagcgc
cacctggccagcatcgagcgccagtatggagccgggggggcggccgttgagggaggaggc
tccgaggagaagaagcagcagggagggatgctgccaaccagagcctcccctcctccccct
cttccttcctcttcctcctcctcctcctcctcctcaggcagcagaagcagccctgccgct
ccggcaccggccgccactttgttctcctttggcaagaattcgacagaagactcggccacc
cccgccgctccgatgaacaccggcgtcacgtttaacttcggtcagaaggtggacagctcc
gtcctcggctgcgtagggtccaagacgactccccccggcttctcgttcggctctggcgcc
tcctctctgttcggagcgccgggatccttcggggcaaagtccgaggacgctcggcccgca
gacgtgaacggagacgaagagacggaggagccgcccaaaccggaggtcaaagaagtgaaa
gaggacaacgccttctactcgaagaagtgtaaactgttctacaagaaggagtctgagttc
aaagagaaaggagtgggaactctgcacctcaaacacacccaggacgggaagattcagatg
atcattcgcgccgacactaacctgggaaacatcctgctgaacatcatgctgcaggcgtcc
atgccgtgctcccgcgtcgggaagaacaacgtgatggtggtgtgcgtccccaacccgccc
gtcgacgacaaagaccccggcagccccgtcccgctgctcatcagggtcaaaaccgccgag
gacgccgacgagctgcacaaaaccctggaggagaagaaaggctga
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