Sander lucioperca (pikeperch): 116056979
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Entry
116056979 CDS
T07345
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116056979
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116056979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
116056979
NCBI-ProteinID:
XP_031165249
Ensembl:
ENSSLUG00000009068
LinkDB
All DBs
Position
2:complement(48343317..48374644)
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AA seq
607 aa
AA seq
DB search
MTMADSPEKRRREMERCPTPVDIPTPDREERKRRRREEEQVVMETSEPEKKKKKKKKKKK
VEEEERLPVDEDESSQKKKREEEEESLPVDEDESSHKKKKKKKKREEEEESLPVDEDESS
QKKKTETQVVIETSVTEKKEKKKKKDKTGLSVAMATTPQNHREADVQKKKKKKKTAGRVE
EVMSQEDESLVEKKKRKDERRREMKKKKTVGRGGRGGEKRREDAVEHVDASLLDELQEFV
PDVKKKSVDEVRKLLRYDLHRFRNFKQQGVSLRWGRCSREENEQIGKNVADFLALTGISS
ANQLLFPQRYKDQERQIRKLRVQHHFLERIAEGIPRTCHQVAMRVKKMFDERNNMGQFSE
EEVRSLTKLQNLHGNDWKKIAEKMDRSVYALEKRFTHIAEGRGSWSPEEESRLKRAVKAY
LEDLVQQSPGPGLTRDQLCNNLPWKNISQQVGTRSWTQCRLKWFSLLKYRLGSPVTFNRG
PAGLEAKILLINTLFNMRVDDMADIDWDDVAQAIGDVTPMCVQKTFHRLKVSRVPNWTSL
SYGEIIDFLHQKVAPLLKERLKREEEEGGGKGEERGGVQGEKRYLLSHIFPSENSEDADD
FRELDNS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcagactcccctgagaagaggaggagggagatggagcgctgtcccacaccg
gtggacatcccaacaccagacagagaggagaggaagaggaggagaagggaggaagagcag
gtcgtcatggagaccagtgagccagagaagaagaagaagaagaagaagaagaagaaaaag
gtggaagaggaggagcgtcttcctgttgatgaagatgaaagcagccagaagaagaagagg
gaggaagaggaggagagtcttcctgttgatgaagatgaaagcagccataagaagaagaag
aagaagaagaagagggaggaagaggaggagagtcttcctgttgatgaagatgaaagcagc
cagaagaagaagacggagacgcaggtcgtcatagaaaccagtgtgacagaaaaaaaggag
aagaagaagaagaaagacaagaccggactgagtgtcgccatggcaacaacaccccagaac
cacagagaagcagacgtccagaagaagaagaagaagaagaagacagctgggagagtggag
gaagtgatgtcacaggaagatgagagtctggtagagaagaagaaaagaaaagacgagagg
aggagagagatgaagaagaagaagacggtaggaagaggaggaagaggaggagagaagagg
agagaagacgcagtagagcatgtggacgcgtccctgttggacgagctgcaggagtttgtt
ccggacgtgaagaagaaatcagtcgatgaggtcaggaaactgctgagatacgacctgcat
cgcttcagaaacttcaaacagcaaggtgtgtctctgcgttggggccgttgctctcgggag
gagaacgagcagatcgggaagaacgtggctgacttcctggctctgacgggcatcagctcg
gccaatcagcttctgtttcctcagagatacaaagatcaggagcgacaaatcaggaagctg
agagtacaacatcatttcctggagaggatcgctgaggggatccctcgtacttgtcatcag
gttgccatgagagtcaagaagatgtttgacgaaaggaacaacatgggacagttctcggag
gaggaggtgcgttctctgacgaagttacaaaatctccatggtaacgactggaagaagatc
gctgagaagatggaccgcagcgtgtatgccttagagaaacgcttcacccacatcgctgag
ggacgggggtcgtggagtccagaagaagagtcccggttgaagcgggctgtgaaggcttac
ctggaggatctggtccagcagagtcctggtcctggtttgaccagagaccagctgtgtaac
aacctgccctggaaaaacatcagccagcaggttgggacccggtcctggacccagtgccga
ctcaaatggttctctctgctgaagtacagactcggttccccggtcacctttaacagagga
cccgcaggactcgaggctaaaatcctcctcatcaacacgctcttcaacatgcgtgtggat
gacatggccgacatcgactgggacgacgtcgctcaggctattggtgacgtgactccgatg
tgcgttcagaagactttccacagactcaaagtttccagagttcccaactggaccagttta
tcctacggagagatcattgacttcctgcatcagaaagtggctccgctcctaaaggagaga
ctgaagagagaggaggaggaggggggggggaagggggaggagagggggggggtgcagggg
gagaaacgctaccttctgtctcacatcttcccctcggagaacagcgaggacgcagacgac
ttccgggagctggacaacagttag
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