Sander lucioperca (pikeperch): 116057120
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Entry
116057120 CDS
T07345
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116057120 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116057120 (myo5b)
04131 Membrane trafficking [BR:
sluc04131
]
116057120 (myo5b)
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116057120 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116057120 (myo5b)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116057120 (myo5b)
mRNA cycle factors
P-body specific factors
116057120 (myo5b)
Membrane trafficking [BR:
sluc04131
]
Others
Actin-binding proteins
Myosins
116057120 (myo5b)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116057120 (myo5b)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116057120 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Ac76
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116057120
NCBI-ProteinID:
XP_031165371
Ensembl:
ENSSLUG00000019904
LinkDB
All DBs
Position
14:8108546..8186208
Genome browser
AA seq
1825 aa
AA seq
DB search
MTSEYYPYSKFTRVWIPDPEDVWKAAEIVKDYKEGEPVLHLQLEDETPLEYPVGPKSNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLEPNHIYTYCGIVLVAINPYDQLDIY
GEEVIRAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYNIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLGLTSAEDFTFTSLGQNIFIEGV
DDAEDFEKTREAFTLLGIKDVSQSSIFKVVASILHLGNIEICSERDGESCHVSRDDVHLQ
HFCRLLGVDLPQMEHWLCHRKLVTASETYVKNMSSQQAANARDALAKHIYARMFDWIVEH
INNMLQTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQAEYI
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQNSSSAHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHEKSDTA
PPAKSSRVNVRSAKPTPKAPNKEHRKTVGHQFRSSLQLLMETLNATTPHYVRCIKPNDNK
EAFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLVKKSDMTTADKKLV
CRNLLETLIKEADMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIQIQKTVRGWLARVRY
RKIRKSAVTLQRYGRGFLARRLAEFLRQSRAALVCQKQYRMVRDRRVYLRVRRAVVTIQA
FTRGMFTRRIYREFLLHHKAMIIQRSVRGWLQRRKFRRARDAAITIQCGFRRVRAKRELK
QLKIEARSAEHLKKLNSGMENKIVQLQRKMDDQSQEFRAQRDQLAVVNASLGTEVKLLQK
QLEQVRQQGGANQIASLQEELAKLGEDLQGATADRKRLEEEHGAEKTGLQLRVEELEREN
SLLKSEKEEMNQKILQLTNITQVDGGDASQREASLQTELDGERQRYQNLLKEFSRLEQRY
ENLKEEMLLSKFQPGHRRNPSNQSSLESDSNYTSISMSEVGDTEDAIQQLEDLGMEKAAM
DISLFMKLQKRVRELEMERKRLQANVDKMEELAKRTDTLQSSEPRSPTSEQENADLAYNN
LKREELESENKKLKNDLNDLRKSIAERASRSDSSNELQDSYNLLLSQLKSANEELDARKE
EVLILRTQIVSAAQLQENNQRIQEENKVPELNNSNEPLDRDEALKAYHGLCESKKLLEAQ
LQTQLRQHKDELDALHTQIELQRDDIEKKTELLNFTASLSPEAQVEFSIGQEITRLTNDN
LDLKEMVEKLEKNERKLKKQLRIYMKKVQEFEASQAAVESSRSRPELTRQVTVQRKEKDF
EGMLEYHKEDEALLIKTLVTDVQPSMVSATVPCLPAYILFMCIRHADYINDDSKVESLLT
ATINAVKKVLKKNNEDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTSKQNEHCLKNFD
LAEYRQVLSDLSIQIYQQLIKVAEATIQPMIVSAMLESESIPSLAGVKPMGYRHRSSSMD
TDAGGPASYTLQALIRQLGQFHAVMQEHGLDPEITGQVVRQLFHCINAVTLNNLLLRKDV
CSWSTGMQLRYNTSQMEEWLRANNLYQSKAAATLEPVIQAAQLLQVKKKTTQDAEAICSL
CTALSTQQIVKILNLYTPLNEFEERVTVSFIRNIQNRPQQRSDPQQLLMDTKHTFPVLFP
YTPSALSLETLHIPASLCLDFLNRV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgaatattacccttactccaagttcacccgggtgtggatccccgaccccgag
gatgtgtggaaggctgcagagatcgtcaaagattataaagaaggagagccggtgcttcac
ctccaactggaggatgaaacgcctctggagtaccctgtgggtccgaagtcgaaccctctt
cctttcctgcgtaacccagacattctggtgggagaaaacgacctcactgctctcagttac
cttcatgaaccggcggtgctgcacaacctgaaggtccgcttcctggagcccaaccacatc
tacacctactgcgggattgtgctggtggccatcaacccgtatgaccagctggatatttat
ggcgaggaggtgatccgggcgtacagcgggcagaacatgggcgacatggacccgcacatc
ttcgctgtggccgaggaggcatacaagcagatggccagggacgagaggaatcagtcgatc
atcgtgagtggagaatccggcgcaggaaagacggtttctgcaaagtacgctatgcgtttc
tttgccacggtgggcggctcggctaacgacactaacgtggaggagaaagtgctcgcctcc
agtcccatcatggaggctattggaaacgctaaaaccacacggaacgacaacagcagtcgc
tttgggaagtacattcagatcggcttcagccgacattacaacatcatcggagccaacatg
aggacgtacctgctggagaagtctcgcgtcgttttccaggctgaagacgagaggaactat
cacatcttctaccagctgtgtgcctcggccagtttacctgagttcaaagacctcggcctc
accagcgcagaagacttcacgttcacgtctctgggacagaacatcttcatcgagggagtg
gacgatgctgaagactttgagaagaccagagaggccttcacgctactcgggataaaggac
gtgagtcagagcagcatctttaaagtggtggcctccattctccatctgggaaacatcgag
atctgctcggagcgagacggagagtcctgtcacgtctcgagagacgacgtccacctgcag
cacttctgccggctgctgggcgtggatctgccgcagatggagcactggctctgccacagg
aagctggtgacggcgtcggagacgtacgtgaagaacatgtccagccaacaggcggccaac
gcccgcgatgcgctcgccaaacacatctacgctcgcatgtttgactggatcgtggagcac
atcaacaatatgctgcagacctcgtctaaacagcactccttcatcggagtcctcgacatc
tacggctttgagacgttcgagatcaacagttttgagcagttctgcatcaactacgccaac
gagaaacttcagcagcagtttaactctcatgtgtttaagctggagcaggcggagtacata
aaggagcagatcccctggactctgatcgatttctacgacaaccagccgtgcatcgacctg
atcgaggctcgtctcggcatcctggacctgctggacgaagagtgtaaagtgccgaagggg
acggatcagaactgggcccagaagctctacaagcagaactcgagcagcgctcacttccag
aaacctcgcatgtccaacacctccttcatcatcatacacttcgctgataaggtggagtat
cagtgtgaaggcttcctggagaagaacagagacaccgtgtacgaggagcagatcaacatc
ctgaaggccagccagtttcagctggtagcagatctgttccatgagaagagcgacaccgcc
cccccagcaaagtcctccagagtcaacgtccgatcagcgaagccgactcccaaagctcca
aacaaggagcaccgcaagaccgtgggacaccagttccgcagctctctgcagctcctgatg
gagactctgaatgcaacgactcctcactacgtccgctgcatcaaacccaacgacaacaag
gaggctttctcgtttgactcgcggcgagcggtgcagcagctgcgagcctgcggcgtcctg
gagacgatccggatcagcgccgccggatacccgtccaggtggacgtacccagacttcttc
aacaggtaccgagtcctggtgaagaagtcagacatgacgacagccgataagaagctggtg
tgtaggaacctgctggagacgctcatcaaggaggcggacatgttccagttcggtaagacc
aagatcttcttccgggcgggccaggtggcgtacctggagaagctgcgggcggaccgcttc
cgctcggcctgcatccagatccagaagacggtccgcggctggctggccagggttcgatac
cgcaagatccgaaaatctgccgtcactctgcagagatacggccgcggattcctcgcccgc
agactggctgagttcctgcgtcagagccgcgcggcgctcgtctgtcagaagcagtaccgc
atggtgagagacagacgggtctatctgagggtgagacgggcagtcgtcaccatccaggcc
ttcaccagagggatgttcacccgcaggatctaccgggagttcctgctgcaccacaaagcg
atgatcatccagcggagcgtgcgcggctggctgcagcgcaggaagttcaggcgggcacgc
gacgccgccatcaccatccagtgtgggttcaggcgcgtgcgagccaagcgggagctgaag
cagctgaagatcgaagctcgctccgccgaacatctgaagaaactcaacagcggcatggag
aacaagatcgtccagctgcagaggaagatggacgaccagtcccaggagttccgggctcag
agggatcagctggcggtggtcaacgcctctctgggcacggaggtgaagctgctgcagaaa
cagctggagcaggtccgtcagcagggaggagccaatcagatcgcctcgctgcaggaagag
ctggcgaagctgggagaagatctgcagggcgccactgccgacaggaagagactggaggag
gagcacggcgccgagaagacggggctgcaactgagggtggaggagttggagagagagaac
tctctgctgaagagtgaaaaagaagagatgaaccagaagatcctgcagctcaccaacatt
acgcaagtagacggcggcgatgcgtctcagcgtgaggcgtctctgcagacggagctggac
ggagagcgccagcgctaccagaacctgctgaaagagttctccagactggagcagagatac
gagaacctgaaggaggaaatgttgctgagcaagttccagccgggccaccggaggaacccg
tccaatcagagcagcctggagtctgactccaactacacgtccatctccatgtccgaggtc
ggagacaccgaagacgccatccagcagctggaggatctgggcatggagaaggcagcgatg
gacatcagtctgttcatgaagctgcagaagagagtgagagagctggagatggagaggaag
aggctgcaggccaacgtggacaagatggaggagctcgccaaacgcactgacacactgcag
agttctgagccgaggagtcccacctcggagcaggagaacgctgatctggcctacaacaac
ctcaagagggaggagctggagtcagagaacaagaaactgaagaacgacctcaacgatctg
aggaaaagcatcgctgagcgagcgtcccggagcgattcgtccaacgagctgcaggacagc
tacaacctgctgctgagtcagctgaaatcagccaatgaggagctggacgctcgcaaagag
gaagtcctgattctgaggactcagatcgtcagcgccgcccagctccaggagaacaaccag
cgcatccaggaggagaataaagtccctgaactcaacaacagcaacgagccgctggacaga
gacgaggctctgaaggcctatcacggactctgtgagtccaaaaagctgctggaggcccag
ctgcagacccagctgcggcagcataaagacgagctggacgccctccacactcagatcgag
ctgcagagagacgacatcgagaagaagacggagctgctcaacttcacggcatcgctgtcc
cccgaggcccaggtggagttcagcatcggccaggagatcacacgcctcaccaacgacaac
ctggacctaaaggagatggtggagaagctggagaagaacgagaggaagctgaagaagcag
ctgaggatctacatgaagaaggtccaggagtttgaagcatctcaggctgcagttgagtcc
agcaggtctcgtcctgagttgacccggcaggtgacggtccagaggaaggagaaggacttt
gaggggatgctggagtaccacaaggaggacgaggccctgctgatcaaaaccctggtcaca
gacgtccagcccagcatggtgtcggccaccgttccctgtctgccggcttatattctcttc
atgtgcatccgccacgccgactacatcaacgacgacagcaaggtggagtctttgctcacc
gccaccatcaacgccgtcaagaaagtcctcaagaaaaacaatgaagactttgagatgacg
tccttctggctggccaacaccagccggctgctgcactgtctgaagcagtacagtggagac
gaggcgttcatgacgcagaacacgagcaaacagaacgaacactgtctgaagaacttcgac
ctggcggagtaccggcaggtgctgagcgacctctccatccagatctaccagcagctcatc
aaagtggccgaagcaaccatccagcccatgatcgtgtcggccatgttggagagcgagagc
atccccagcctggcgggggtgaagccgatgggctaccgacaccgttcgtccagcatggac
acggacgccggcggccccgccagctacacgctgcaggcgctgatccgccagctgggccag
ttccacgccgtgatgcaagagcacggcctggaccccgagatcacgggtcaggtggtccgc
cagctgttccactgcatcaacgccgtcacgctcaacaacctgctgctgcgcaaagacgtg
tgctcctggagcaccggcatgcagctacggtacaacacgagtcagatggaggagtggctg
cgagccaacaacttgtaccagagcaaagcagcggcgacgctggagcccgtcatccaggca
gcccagctgctgcaggtcaagaagaagacaacgcaggacgccgaggccatctgctcgctg
tgcacagcgctcagcacgcagcagattgtgaagatcctgaacctttacactcctctgaac
gagtttgaagaaagagtcaccgtgtccttcatcagaaacatccagaaccgtcctcagcag
agaagcgatcctcagcagctcctgatggacaccaagcacacgttcccggtcctgttcccg
tacacgccgtcggccctgagcctggagacgctgcacatccccgcctcgctctgcctcgac
ttcctcaacagagtctga
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integrated database retrieval system
