Sander lucioperca (pikeperch): 116057336
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Entry
116057336 CDS
T07345
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04020
Calcium signaling pathway
sluc04080
Neuroactive ligand-receptor interaction
sluc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116057336 (grin3ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116057336 (grin3ba)
04082 Neuroactive ligand signaling
116057336 (grin3ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116057336 (grin3ba)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116057336 (grin3ba)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
116057336
NCBI-ProteinID:
XP_031165590
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All DBs
Position
18:22966045..23078043
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AA seq
1333 aa
AA seq
DB search
MVSLSGLWTYCLAPGRPHLLFLTARPLLLLLLLAAFSSPESCFPHPQPCHILARIGHTVR
LGALLPTRQPARIQNALNRALASLRHQSGGADSSTTASQTPPLLPYNLSLEMVARSPAGG
DPESLSRSTCQDLVVRGVSAVLAFPRSREELIQVEFLSSFLEIPFISILEETEPLVTKNR
FHLQMSARVPPSTLGSLLLAVLQGREGDRDRGSRGESSWGGAAVICPGWEEGGEGLLSHL
QMHSGSNWHLWDIINMTLISGGADRRGETREEKKEDQREEEALKILSTRFLRSPSPISSV
LLLGSDPECLSSILRAAQRLAPLLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPI
SFYIRDALQLIGRAFTAATMVSPDLALIPNVVNCYDKPNQQELPSSGQYLARFLSNTSFT
GATGLIQVDAGLSRVLTSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVGGF
GSSQGQGLGAGVRGGDGQGDNNAEGRWRPGESVEGHRLQVVTLVEHPFVFTREVDEDGLC
PAGQLCLDPRTNRSDLIQSLFNQLHNPNTSVADWEGNELPEDLRKCCYGYCIDLLEKLAE
DMGFTFDLYIVGDGKYGALSGAGRWTGLVGDLRSGTADMAVTSFSINSARSRVIDFTSPF
YSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHGR
NRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVM
VGEKTFEEVSGIHDDKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNQPTTPEG
VHMLKTDPPALDAFIMDKALLDFEVSIDAECKLLTVGKPFAIEGYGIGLPQGSPLTRNVS
EFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALLT
LAGEHTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHTTYEDVGKELTDLDQNPSSCISEN
CTLHRKQHQPPPPSPPTSLPASTTAGDTCNSSPSHEPKEKRVHFDLETLHSYRLRTHTAS
VRGRPGMVGRPGLGLGGWGLGSFTSPPQISLHANGGPVCSLASTGLVLSPLGSRAAQTSL
WEGELHDLQGKIETFRTQLREALARRAEIQSSLERERSGLVRRDTSLERERDRQRIQTIN
TDRSSSTQPKLPERDRTSQLQTLNNQQTGRANQSGGPGTLEHGRSSQLNTVNSLDRGRAN
QLRSVNTLTGERTVHSRTSTSLERSRVNQPGAGNITVQSRNTSSLDRQMANQSRTLNTLE
STKANQSSVSSGT
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctctctggactctggacctactgcctcgcccccgggagacctcatctcctc
ttcctcaccgccagaccgctcctgctgcttcttttactagccgccttctcctccccggag
tcctgcttcccgcaccctcaaccttgccacatcctcgcccggataggacacaccgtgcgc
ctcggtgcgctcttgccgacccgccagccggcacggatacaaaacgcgctcaaccgcgcc
ctggctagcctccggcaccagagcggaggggcagactcctccacgacagcctcccaaaca
cctcctctgctgccctacaacctgagcctagagatggtggcgcgatcgcccgctggaggg
gacccggagtcgttgtcccgtagcacctgccaggacctggtggtcaggggggtgtccgct
gtgcttgcctttccccgctccagggaagagttgatccaggtggagtttctctcctctttc
ctggagatccccttcatctccatcctggaggaaacagaaccccttgtgactaagaaccga
ttccacctgcagatgtcagcccgtgtgcctccatcaaccctaggcagcctgctgctggcg
gtcctgcaggggagagaaggggacagggacagaggaagccggggggaaagcagctgggga
ggagcagctgtgatctgccccgggtgggaggaagggggtgaagggttgctgtctcacctg
cagatgcacagtggttctaactggcatttgtgggatatcatcaacatgaccctcatctcc
gggggcgcggatagaaggggggagaccagggaggagaagaaagaggatcagagggaagag
gaggctttgaagatcctctccacccgtttcctgcgctccccctctcctatctcctccgtt
ctcctcctgggatctgatcccgagtgcctctcctccatcctgcgggccgctcagcgcctc
gctccattactaccagcactgcagtggatcatgggatatcccttgtctccagattcgctc
cacactctgggaggtccccttggactgttagcctacggggaggtgggccgcaagccaatc
agcttctacatccgggatgctttgcagttgatcggccgcgcgttcactgcggcgaccatg
gtgagcccggacctggcgctgattccaaacgtggtgaattgttacgacaaaccaaaccaa
caagagctgccctcctcaggacaatatctggccaggttcctctccaacacttccttcacc
ggggccacaggcctgatccaggtggatgctggcctctctcgggtcctcacctcccagctg
ttccacgtgtggagcctgaagaggggtgctcttggccagccggcctgggtgactgtaggc
cagtggacccgaggcaggctggagctagaaggggggatcctgggactggtgggagggttt
gggagcagccagggacaaggtcttggagccggggtgaggggaggggacggccagggggac
aataacgctgaaggacgctggaggccgggagaatccgttgagggacaccgcctgcaggtg
gtgacactggtggaacacccgtttgtcttcacacgggaggtggatgaggatggattgtgt
ccagctggtcagctctgtctggatcccagaaccaaccggtccgacttaatccagagcctc
ttcaaccagctgcacaacccaaacacttcagttgcagactgggaggggaatgaactaccg
gaggacctgaggaagtgctgctacgggtactgcatcgacttgttggagaaactggccgag
gacatgggtttcacctttgacctttacattgtgggagatgggaagtacggagcgttgagc
ggggcagggcgctggacggggctggtcggggacctgcggagcggaaccgctgacatggct
gtcacctctttctctatcaactctgcccggagcagggtcatcgatttcacctcgcccttc
tactccaccagcctgggcattttggttcgtagccgggacactgcagcccccatcggagcc
ttcatgtggcctctccactggtccatgtgggtgggtatttttgtcacgctgcatctcacc
gcgctcttcctcaccttgtacgagtggaacagccccttcggcatgactccccatggcagg
aacaggctgcgtgtgttctcctactcctccgccctcaatctctgctacgccatactgttt
ggacgtactgtcgccaccaagactcctaaatgctggaccgggcgcttcctgatgaacctt
tgggcaatcttctgcttactggtgctgtctagctacaccgccaacctagctgcggtcatg
gtcggggagaagaccttcgaggaggtctcaggaattcatgatgataagctgcaccatcca
tccctgggcttccgttttgggacggtgagggagagcagcgctgaggattacatgaagaag
agcttcccagagatgcacgagtacatgagacgcttcaaccagcccaccaccccagagggc
gtacatatgttgaagacagatcctcctgccctggatgcgttcatcatggacaaagccctg
ttggactttgaggtctctatcgacgcggagtgcaaactgctcactgtggggaagcctttc
gctattgaaggctacggtataggcctgccccagggctctcccctaacccgtaatgtgtca
gagttcgtgagtcgctacaagtctgacggcttcatggacatgctacatgacaaatggtat
aaggttgtgccctgcgggaagcgagtctttgcagtcactgagactctacagatggggatc
cagcatttttccggcctgtttgtgctgctgtgtatgggggtgggtggagccttgctgacc
ttggcaggtgaacacaccttctatcacctggtcatccctcgcctccggcgcacgcacaca
ctgcagtactggctgcacaccagccagaaaatccaccgagccctccacaccacgtatgag
gatgttggaaaggagctgacagacctcgaccaaaacccctcctcttgtatctcagagaac
tgcaccctacacaggaaacagcatcagcctcctcccccatcccctcccacatccctccct
gcttccacgacagctggagacacctgcaactcctcaccatcccatgagcccaaggagaaa
cgcgtgcactttgacctggaaaccctccacagctaccgcctgcgcacacacaccgcctca
gtgcgcggcaggcctggtatggtcggccgtcctgggctcgggttaggagggtgggggcta
ggcagttttacctcccctccacagattagcctccatgctaacgggggccccgtttgttca
ctggcttccacaggcttggtgctctctcccctgggtagcagggccgctcagaccagccta
tgggagggggagctccacgacctgcaggggaagattgagacgttccgcacccagctgaga
gaggctctggccaggagagcagagatccagagcagcctggagagagagaggagcggactt
gtacgcagggataccagtctggagagggaaagggacagacagaggatacaaactattaac
acagacagaagtagctccactcagcccaaactccctgagagagacaggaccagccaactg
caaaccctgaataatcaacaaacagggagggctaaccaatcaggcggtcctgggactctg
gagcacgggagaagcagccaattaaacacagtgaacagtttggacagagggagagccaac
cagttacgctctgttaatactttgacgggagaaaggactgtccattcacgcacttccacc
agtttggagcgaagtcgagtcaaccagccaggggctggaaacataactgtccaatcgcgg
aacacttctagcttggacagacagatggctaaccaatcacgcactctgaacactttggag
agtacaaaagccaaccaatcaagtgtaagcagtgggacttga
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