Sander lucioperca (pikeperch): 116057386
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Entry
116057386 CDS
T07345
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116057386 (smc6)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116057386 (smc6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
TMF_TATA_bd
AAA_29
FlaC_arch
AAA_15
Motif
Other DBs
NCBI-GeneID:
116057386
NCBI-ProteinID:
XP_031165670
Ensembl:
ENSSLUG00000017822
LinkDB
All DBs
Position
18:complement(24723460..24741151)
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AA seq
1087 aa
AA seq
DB search
MSKRKLKVISGATAVKSRRLTAVGMEDAPDDRKHQRPSSSSLTPSATGDIGVIESITLKN
FMCHHLLGPFQFGSNVNFIVGNNGSGKSAILTALIVGLGGKATVTNRGASLKDFVKTNEN
AADITIKLKNRGPDAYKRDVYGDCISIEHRIFSDGSRNCRLKSKSGQLISNKKEELTSIL
DHFNIQLDNPVSILNQEMSKQFLHSKSESDKYKFFMKATLLEQMRRDYVHIKLTKTVTRQ
QVERQEESLKDLKQEFLQKKERYEKLPSFSEIKVVLENLKKAMAWCLVKEKEQLVQQLKE
DVENEANNYKHQENLQLCQTKVTQVEKKLQCIKSRVTSMKKEQESLSKDNLNLKEQVKAI
SKAHKEQELVYFRALNKLKQSEQEQNLLEEKIKKAKTSASLNNEEETEYSAQQKKISSLK
EQLAELEKKCSQLNDEIKNKHQALYKGKEERDKLRLEERNIQVLYESKLRRKNQVLASRS
NKLKRFGDHVPDLLGAIAEAYATGRFLKRPVGPIGACISLKDPMLAVAVECCLRSFMKAF
CCDNYKDEAVLQELMSQYYPRGNRPQIIVSPFSEKVYNIHGRKAHNQEYPSVLDIITASS
PVIINCLIDMRGIESILIIREKDKARRVMQQGRPPKNCREAFTVEGDQVYPNRYYTSDIS
MAKYLGGDLESEISMLESDLENHQAQLSRFQLHVTSVTEDIVSMESELNSTIMTLKKTLV
SVNQVKATITELENAGEEHIDDISSLEEVAHENRQKIEAEKQTVHEAKTELDNHQKTTED
IESKYSSVRDRIDQLSEDTEPLMDEQLKLEAECAKHKRTLKILENKLKAHEDNIQAMRSD
LSQREEELQEYVAKATEISPERQQVTRSPKSIDTEITRLQKKLKVYESNHGEHEHVVREY
AEALTLYKEKTNQVRDLRRFIDRLDSIMSDRQCRYKTMRRSLSVRCKLYFNNFLIKMNCC
GSMIFDHNNETLSISVTPPGREDNGASDMRSLSGGERSFSTVCFMLSLWEITESPFRCLD
EFDVYMDMHNRRISLDLLLELSERQHLRQFIFVTPLTTSHLPKTNLIKIHQLQDPEGDRS
EAVGDDV
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaaactgaaagtgatcagtggtgcgacagctgtcaagagccgcagactg
acagctgtgggtatggaagatgcaccagatgataggaagcatcagagaccttcctccagc
agcctcactccctctgccacaggagatattggcgtcattgagagtatcactctcaagaat
ttcatgtgtcaccatttgctcggtccgttccagtttgggtccaatgtgaattttatcgtt
ggcaacaatggaagtgggaaaagtgcaatcctgactgctttgattgtaggcctcggtgga
aaagccactgtcacaaacagaggagcgtctctgaaggattttgtgaagaccaatgagaat
gctgcagatataacaataaagctgaaaaacagaggaccagatgcttataaaagggacgtc
tacggcgactgtatctctatcgagcaccggatcttcagtgatggatctcgaaactgcaga
ctgaagagcaaatcaggacaacttatctcaaacaagaaggaggagctgaccagcattttg
gaccactttaacatccagttggataacccggtgtccattctcaaccaagaaatgagtaaa
cagttcctgcattcaaaaagtgaatcagacaagtataagttcttcatgaaagcaactctg
ctggaacagatgaggagagattacgtccacatcaagctcactaaaacagtaacacgacag
caggttgagagacaggaggagtctctcaaggacctgaagcaagagtttctgcagaagaaa
gagaggtatgaaaaattgccgtccttcagtgagataaaggtggttttggagaatctgaag
aaagcaatggcctggtgtttggtcaaagagaaggagcagttggtacagcagttaaaggag
gacgttgaaaatgaagccaataattacaaacatcaggagaaccttcagctctgtcagact
aaggtcacacaagtagaaaagaagcttcagtgcatcaaaagcagagttaccagcatgaaa
aaggaacaagagtctctatcaaaggacaatctgaatttgaaagagcaagtgaaggcaatc
agcaaagctcacaaggaacaggagctcgtttattttcgggcgctgaacaaactcaaacag
tcagagcaggagcaaaaccttctcgaggagaaaattaaaaaggcaaaaacaagtgcaagc
ctgaacaacgaggaagagacggaatatagtgcacagcagaagaaaatatccagtctgaaa
gagcagcttgcagagcttgagaaaaagtgctcccagctgaatgacgagatcaaaaacaaa
catcaggcactttacaaaggaaaggaggaaagggacaagctgagattggaggaaagaaac
atccaggttttgtacgagtccaaactgaggaggaagaatcaggtcctcgccagtcgatca
aacaaactgaagcggtttggagatcacgtacccgacctgctgggtgcaattgctgaggcg
tacgccacagggcgctttctcaagagacccgttggtccgataggggcgtgcatcagtttg
aaggatcccatgttggctgtagccgtggagtgctgtttgcggagctttatgaaggctttc
tgctgtgacaactacaaagacgaggcggtcctgcaggagctgatgtctcaatattaccca
aggggcaacaggccgcagatcattgtcagcccattctctgaaaaagtttacaacattcac
ggacggaaagcacataatcaagaatatccgtctgtgctggacataatcacagcgtcaagc
cccgtcattatcaactgcctgattgatatgagggggatagaatccattctcataatcaga
gaaaaagacaaagcgaggagagtcatgcagcaaggccggcctcctaaaaactgtcgtgaa
gccttcactgtggagggagatcaggtgtacccgaaccgttattacacctccgacatcagc
atggccaaataccttggcggggatctggagtctgaaataagtatgctggagtctgacctg
gagaatcaccaggctcagctgtccaggtttcagctccacgtcacctctgtgacggaggac
atcgtgagcatggagagcgagctgaacagcaccatcatgaccctgaagaagactctggtc
tctgtgaatcaagtcaaggcgacaataaccgagctggagaatgctggcgaggagcacatc
gatgacatcagctccttggaagaagttgcccatgagaaccgacagaagatcgaggcagaa
aagcagaccgttcatgaggcaaagacggagctcgacaatcatcagaaaacaacagaggac
atcgagtccaagtactcctctgttagagatcggattgatcagctttctgaagacacggag
ccgttaatggatgagcagctgaagctggaggctgagtgtgccaaacacaaacgaaccctt
aagattttagaaaacaagctgaaggctcatgaagacaacatccaagctatgagaagtgac
ctctcccaaagagaagaagagttacaggaatatgtggccaaagccacagagatcagtcct
gagcggcagcaggtgacccgcagccccaagagcatcgacaccgagatcactcggctgcag
aagaaactcaaggtgtacgagagcaaccacggcgagcacgagcatgtggtcagggagtac
gctgaggccctcactctctacaaagagaaaaccaaccaagtgagagatctgcggaggttc
attgatcgactcgacagcatcatgtcagacaggcagtgcagatacaaaacaatgcgtagg
tccctctcggtcagatgcaagttatacttcaataactttctgataaagatgaactgctgt
ggctctatgatttttgatcacaacaatgagacactatcaatctcggtgacacctccggga
agggaggataatggtgcgagtgacatgaggtcgctgtctggtggtgaacgctccttctcc
accgtttgcttcatgctctccctgtgggagatcaccgaatcacctttcagatgcctcgat
gagttcgacgtctacatggatatgcacaatcgcagaatctctctggatctcctcctggag
ttgtcagagcggcagcaccttcgacagtttatcttcgttactcccctcaccaccagccat
ttgcccaaaaccaacctcatcaaaatccaccagcttcaggatccagaaggagatcgtagt
gaagcggtgggtgacgatgtttga
DBGET
integrated database retrieval system
