Sander lucioperca (pikeperch): 116057478
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Entry
116057478 CDS
T07345
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X5
KO
K08518
syntaxin-binding protein 5
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116057478 (stxbp5b)
Membrane trafficking [BR:
sluc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116057478 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
116057478 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
RAB3GAP2_N
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
116057478
NCBI-ProteinID:
XP_031165816
Ensembl:
ENSSLUG00000017932
LinkDB
All DBs
Position
18:24527422..24566282
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AA seq
1189 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSATAQPGTPRENDVIQETLQSEHFQLCKTVRHGFPYQPSS
MAFDPVQKILAVGTQSGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDSI
HLWNLRQKIPAVLHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIM
WNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKCKKADYRYNYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNIRAQAKSAQIITPHGKQPKDGKKPEPCKPILKVEYKT
TRAGDPFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEP
YAVVVLLEKDLVVIDLGQIGYPIFENPYPLTIHESPVTCCEYFADCPAELIPALYSVGSR
QKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKVF
ERARSKEEKANTDIVEEDPFAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQL
LEVRMQSEFSDGDSPDPGGDQTPTLPTPGASSSPQEIEPPAQPSTGSNSSDGPRDNKPCL
QVRSSPLKQSPGYQVELVIQLVWVSGEPPQPITSLAINSSYGLVVFGNSNGLAVVDYLQK
TLLLNMGTSELYSPSDPYQRQPRSPRKTRQSSGATCDSNDGSNTSEDRCKSPTSGSTSPC
NSDDERKQKFIDKVKFKSRRFSKTVANDFAKMSRKISSSSEQKPDLAEERFQRWRSLTNK
KHFCYINKGKAAARMTQKGAFCRTKSDLNYYAKDNAFTRSRSSSVTSIDRESREAISSFH
FCESFPRKTDSVVSPCLLVGTTQGTVMMVALSLPPPGDHRLQQPVGISSCGTMVTLKGGI
LTMALLDNTGTLLPPSYEPWYDPNASDEEKEKSRRRRPASPPSAQEGQDSQFAVLCSEKQ
AKVVAMPSQTRIYKHSITESSFVLRADVVQMAGAYCIACFCANGHIMTLSLPSLRPLLDV
NYLPLTDMRIARTFCFSNLGQALYLTSPMEIQRITYSQETCDNRQEMLSELFTPVETPEA
PNKGFFKGLFGGGAQSLDREDLFGETGAGKASRSLAQHIPGSGGMEGMKGAASGVVGDLA
RARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacattaggaaggtgctagacggcttgacagcggcttcttcttcctcc
tccgcaactgcccagccgggtactcccagggaaaacgatgttatccaggagactctccag
tcggagcattttcagctttgcaagactgtgcgccatggcttcccatatcaaccatcctca
atggcttttgaccccgtccagaaaatcttggccgtcgggactcagagtggagctttgagg
ctctttggccgtgcgggtgtggagtgctactgtcagcatgagagcggtgcggctgtcatc
cagctccagttcctgatcaacgagggggcgctagtgagtgccttagctgatgacagcatc
cacctgtggaacctgaggcaaaaaatccctgcagtcctacattctctcaagttcaacagg
gagagaatcacatactgccacctgcccttccagagcaagtggctttacattggcacagaa
agaggaaacatccacattgtcaacgtggagtccttcactctctcaggctacgtcatcatg
tggaacaaagccatcgaactatccaccaaaacacacccagggcctgttgtgcacatcagt
gataaccccatggatgaaggaaagcttctgattggatttgaatgtggggttgtggtgttg
tgggatttgaagtgcaaaaaagctgactaccgctacaattatgatgaggcgatccactca
gtagcctggcatcatgagggtaaacagtttgtttgcagccactctgatggcactctgacc
acatggaatatacgagcccaagccaagtctgcacagatcatcacaccacatggaaagcag
cctaaggatggaaaaaagccagaaccatgcaagcctattctgaaggtggagtataaaaca
acaagggctggggacccattcatgatcctgtctggaggtctgtcttacgatacagtgggg
agaagagcctgtctgactgtgatgcatggaaagagcactgctgtcctagagatggactac
cccatcgtagatttcctaacgctgtgtgaaactccatatccaaatgactttcaggagcct
tatgctgtggtggtcctcctcgagaaggacttagttgtaatagacctcggacagattggg
taccccatatttgagaatccatatcccctgactatccatgagtcaccagtgacctgctgt
gagtactttgctgactgccctgctgaacttattcctgcactttactctgtcggcagccgg
caaaagagacaaggttacagcaagaaggaatggcctattagtggaggaaactggggccaa
ggcactcagagttacccagagatcataatcactggacatgctgatgggtcgatcaaattt
tgggatgcttctgcattaatgcttcaagtgctgtacaagctgaagactgccaaggttttt
gagagggcacgcagtaaggaggagaaggcaaacacagatatagtagaggaggacccgttt
gccatccagaccttgtcctggtgccctgagagcagaatgctctgtgtggccggggtgtct
gcccacgttatcatctataggttcagcaaacaagaaatcaccactgaagttgtgcagctt
ttggaggtgcggatgcagagtgagtttagcgatggtgactcccctgatccaggaggggat
cagacccccaccctgcccaccccgggagcttcctccagccctcaggagattgagcctccc
gctcagccctccacaggcagcaactcctccgacggaccccgggacaataaaccatgcctg
caggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtgatccag
ctggtgtgggtgagcggggagccacctcagcccatcaccagcctggctatcaattcctcc
tacggccttgtggtgtttggaaacagtaatggtctagctgtggtggactacctccagaaa
actctgctcctcaacatgggcacatcggagctgtacagcccatctgacccctaccagagg
cagcctcgctcgccacgcaaaacacggcagtcctctggagcaacctgtgattccaacgat
gggtccaacacctcagaggaccgctgcaaatcacctacttcaggatctacctcaccttgc
aattctgatgatgaacggaaacagaagttcatagacaaggtgaagttcaaaagcagacgc
ttttccaagacggttgccaatgactttgccaagatgtcacggaaaattagctcgtctagc
gagcaaaagccagacctggcagaggagaggttccagcgatggcgctctctcacaaataag
aagcacttttgttacataaacaaaggcaaggcggcggccaggatgacccagaagggggcc
ttctgtagaactaaatcagatctcaactactatgccaaggataacgctttcacccgctca
cgcagttcaagtgtcaccagcatagacagagagtcccgagaggccatatcctcctttcac
ttctgtgagagtttccccaggaagacggacagcgtggtcagcccctgtctgctggtggga
accacccagggcactgtgatgatggtggcgctcagcctgccgccccctggggaccacagg
ctgcagcaacccgttggcatctcctcctgtggcactatggtcacactcaaaggaggcatt
ttgactatggccctgttggacaacactggaactttgctgcccccttcctacgagccatgg
tacgacccaaatgcctcagatgaggagaaggagaaaagccggaggcgcaggccagcctcc
cctccctcggcacaagagggtcaagattcccagttcgctgtgctgtgttcggagaaacag
gccaaggtggtggccatgccctcccaaacccgcatctacaaacacagcatcactgagtcc
tccttcgtgctcagggctgatgttgtgcagatggccggagcttactgcatcgcctgtttc
tgtgctaacggccatatcatgaccctgagtttacccagtctacggcctctgctggatgtg
aactacctgccgctgacagacatgcggatagccagaacgttctgcttctccaacctgggt
caggccctgtacctcacctcccccatggagatccagaggatcacctatagccaggagacc
tgcgacaaccggcaggagatgctcagtgagttgtttacccctgtggagacaccagaggct
cctaacaaaggtttcttcaaaggcctgtttgggggtggcgctcagtctctggacagggag
gacctctttggtgaaacaggtgctggtaaggcctcccgtagcctggcccagcacatccct
ggctcaggaggcatggagggcatgaagggtgcagcgtctggggttgtgggagatctggcc
cgcgcccggatagctctggacgaaagagggcagaaactgggcgagctggaggacagaacg
gcagccatgatggccagcgcagattccttttccaaacatgctcatgatatgatgctgaag
tacaaagataagaagtggtaccagctctga
DBGET
integrated database retrieval system
