KEGG   Sander lucioperca (pikeperch): 116057578
Entry
116057578         CDS       T07345                                 
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
  KO
K04648  dynactin 1
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc04814  Motor proteins
sluc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    116057578 (dctn1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116057578 (dctn1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sluc04131]
    116057578 (dctn1b)
   03036 Chromosome and associated proteins [BR:sluc03036]
    116057578 (dctn1b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sluc04812]
    116057578 (dctn1b)
Membrane trafficking [BR:sluc04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    116057578 (dctn1b)
Chromosome and associated proteins [BR:sluc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     116057578 (dctn1b)
Cytoskeleton proteins [BR:sluc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     116057578 (dctn1b)
SSDB
Motif
Pfam: Dynactin CAP_GLY Gemin7
Other DBs
NCBI-GeneID: 116057578
NCBI-ProteinID: XP_031165965
Ensembl: ENSSLUG00000012994
LinkDB
Position
18:complement(7549750..7607792)
AA seq 1277 aa
MSQTRRNTYTRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGQHGTVAYIGNTLFASGKWV
GVILDEAKGKNDGTVQGKRYFTCAENRGIFVRQSQIQLVDDGADTTSPETPEPGTGKVPK
REILETPKSTKLRGVKLKKTPAPRKTTARRPKQPSRPAGGKGAASGSASASAGEMSSSEP
STPAQTPLAAPVIPTLHSPGNPPAPVPTKEDVTMETQEEEALRVQVKDLEEKLETLKMKR
TEDKAKLKELEKHKIQLEQLQEWKNKMQEQQAELQKQLKEAKREAKEALEAKEHYMEEMS
DTADAIEMATLDKEMAEERAESLQLEVDSLKERVDELTMDLEILKHEIEEKGSDGAASSY
HVKQLEEQNGRLKEALVRMRDLSSSEKQEHVKLQKQMEKKNVELDTLRSQKEKLQEEMTA
AEKTIDELKEQVDAALGAEEMVEMLTERNLDLEEKVREMRETVTDLEAINEMNDELQENA
RETELELREMLDLGAAKVRESEKHVEAAQETVADYQQTIKKYRELTAHLQEVNRELTSQQ
EASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVSQANRHVSLLTSFMPESFLR
HGGDHDCILVLLLMPRLICKAELISKQAQEKFDLNENCVERAGLKGAVGEQLSFAGGLVY
SLSLLQATLHKYEHALAQCSVDVYKKIGALYPEMSVHERSLDFLIDLLHKDQLDETVNVE
PLTKAIKYYQHLYSIHLADQNEDCTMQLADHIRFTQSALDCMAVEVGRLRAFLHAGQEKA
DLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALDFGQQVCDTLSDCRKHLTWVV
AVLQEVAAAGAQMMSPLGEQEGLSAVKLEDVAFKAGEQIYGSQGANPYDCLRQSCGIVIA
TMNKMATAMQEGEYDSERPQNKNPLPVDLRGAALRAEITDAEGLGLKLEDRETVIKELKK
SLKIKGEELSEASVRLSLLEKKLDSSSKDADERVEKIQTRLDDAQTLLKKKEKEFEETMD
ALQADIDQLESEKAELKQRINSQSKMTVDGLRGTGPSGIASIVTGVAGEEQKVNMMSGVS
SGSGVQVVDSPLLTQQIEAQRLCIKHLKNDNNRLKAEKMRAQLASLPPLHVTKLPSRDGG
HPKVLSSALYRKTDQLLETLLQMSANVKVVDITGKSPVIPSAQLLEQTARLQSLSDTLGR
LKDEVAEHVVHQQPGARVPSDFATFPSTSFVKAKEEKQGDTVLVGRVMVPCTRGQEQVHR
LVLSQSQLQRVHSLLRT
NT seq 3834 nt   +upstreamnt  +downstreamnt
atgtcacagactaggaggaacacatacacccggaccaccagcagcggcagcagcaggatg
agctcggacgggggcgggcgtcccgtcaaagtgggctccctggtggaggtgattgggaag
gggcagcacggcactgtggcctacatcggcaacactctgtttgcctccggaaaatgggtg
ggagtcatcctggacgaggccaagggcaagaacgacggcaccgtgcagggcaaacgctac
ttcacctgcgcggagaatcgtgggatatttgtgagacaatcacagatccagctggttgat
gatggggccgacacaacgtctccagagacgcctgagcctggcacaggcaaggttcccaaa
cgagagatcctggagacgcccaagtccactaaactgcgaggagtgaagcttaaaaagact
cctgcaccccggaagactacggccagaaggccaaagcagcccagccgacctgcaggggga
aagggggctgcgtccggttcggcctcggcctctgcaggggagatgagcagcagcgagccc
agcactccggcccagacccctctggcagctccggtcatccccaccctccactcccctgga
aaccctccagcacccgtccccaccaaggaggacgtcactatggaaacacaggaggaggag
gcgctgcgtgttcaggtgaaggacctggaggagaagctggagacactgaagatgaagcgg
acggaggacaaggccaagctgaaggagctggagaagcacaagatccagctggagcagctg
caggagtggaagaacaagatgcaggagcagcaggccgagctgcagaaacaactcaaagag
gccaagagggaggcaaaagaagccctggaggcgaaggagcattacatggaggagatgtcg
gacacagcggatgcgatcgagatggccacactggataaggagatggccgaggagagggcc
gagtctctgcagctggaggtggactccctcaaagagagggtggacgagctcaccatggac
ctggagatcctcaagcacgagattgaggagaaaggctcggatggtgctgcctccagttac
catgtgaaacagctggaagagcagaatggcagactgaaggaagcactggtcaggatgcgt
gacctgtcgtcgtcagagaagcaggaacatgtgaagttgcagaagcagatggagaagaag
aacgtggagctggacactctgaggagccagaaagagaaactgcaggaggagatgacggcg
gcagaaaagaccatcgacgagctcaaagaacaggtggatgcagctctgggggcggaggag
atggtggagatgctgacagagagaaacctggacctggaggagaaagtcagggagatgaga
gagacggtcactgacctggaagctataaatgagatgaacgatgagctccaggagaacgcc
cgagagacggagttggagctgagggagatgttggatctgggagctgcgaaagtccgagag
tctgagaaacacgttgaagctgcgcaggagaccgtagccgattaccagcagaccatcaag
aaataccgcgagctcacagctcacctgcaggaggtgaacagagagctgacgagccagcag
gaagcctcagcagagttgcagcagcagccgccggcggagatgtttgatttcaagattaag
tttgcagagaccaaggcctacgccaaggccattgagatggagctgaggaagatggaggtc
agtcaggccaacagacacgtttcccttctgacctccttcatgcccgagtccttccttcgt
catggcggagaccacgactgcatcctggtgctgctgctcatgcccagactcatctgcaag
gccgagctgatcagcaaacaggcccaggagaagtttgacctgaatgagaactgtgtggag
cgagccgggctgaagggagcggtcggggagcagcttagcttcgctggcggtttggtctac
tcgctcagtctgctgcaggctacactgcataaatacgagcatgctctggctcagtgcagt
gtggatgtctataagaagatcggcgctttgtacccggagatgagcgtccacgagcgttct
ctggatttcctcatcgacctgctgcacaaagaccagctggacgagacggtcaacgtggag
ccgctcaccaaggccattaaatactatcagcacctgtacagcatccacctggcagatcag
aacgaggactgcaccatgcagctggctgatcacatcagatttacccagagtgccttggac
tgtatggcggtggaggtgggtcgtctgcgggcgttcctgcatgcgggccaggagaaggcc
gacctcgccgtgctgctgaaggacctggagacgtcctgcagcgacatccgacagttctgc
aagaagatccgccgcaggatgcccggaaccgacgcgccgggcatcccagcagcactcgac
ttcggacaacaggtgtgcgacaccctctccgactgtaggaaacacctgacctgggtggtg
gccgtgctgcaggaagtggcagcagctggagctcagatgatgtctcctctcggtgaacag
gaggggctgtcggccgtcaaactggaggatgtggcgttcaaggcaggagagcagatttat
ggatcccagggtgccaacccctacgactgtctgcgccagtcctgtggcatcgtcatagca
accatgaacaagatggccaccgccatgcaggagggagaatatgactcagagaggcctcaa
aacaagaaccctctacctgtggatctgcgaggggcggctcttcgagctgaaatcaccgac
gccgaaggtctcggcttgaagctggaggacagagagacagtcatcaaagagctgaagaag
tctctcaagatcaagggagaggagctgagcgaggcgagcgtccgtctcagtctgctggaa
aagaagctggacagttcgtccaaggacgcagacgaacgcgttgaaaagattcagactcga
ctggacgatgcccagactctgctgaagaagaaagagaaggagtttgaggagacgatggac
gctctgcaggccgacattgaccagctggagtcggagaaggccgagctgaagcagcgaatc
aacagccaatccaagatgaccgtcgacgggctgagaggaaccgggccgtcaggaatcgct
tccatcgtcacaggagtggcaggagaggaacaaaaagtgaacatgatgtcgggcgtcagt
tctggttcgggtgtccaggtggtcgactctcctctgctgactcagcagattgaagctcag
agactctgcatcaaacaccttaagaacgacaacaacaggctgaaggctgaaaagatgcgt
gctcagctcgcctctctgcctcctcttcacgtgaccaaacttccctccagagacggaggt
caccctaaagtgctctccagcgccctctaccgcaagaccgaccagcttctggagactctg
ctgcaaatgagtgccaacgtcaaggtggtggacatcactgggaaatctccagtgatacct
agtgctcagctcctggaacagacagctagattacagtccctgagtgacactctgggcaga
ctgaaggatgaagtagcagagcacgttgtccaccagcaacctggagctcgagtcccgtct
gattttgcgacgtttccttcgacctcgtttgttaaggcaaaggaggagaagcagggcgac
acagtgctggtgggtcgggtcatggtgccgtgtacccgcggtcaggagcaggtccaccgg
ctcgtcctatcccagtctcagctgcagagagttcacagtctgttgcggacctaa

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