Sander lucioperca (pikeperch): 116057578
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Entry
116057578 CDS
T07345
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04814
Motor proteins
sluc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116057578 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116057578 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116057578 (dctn1b)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116057578 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116057578 (dctn1b)
Membrane trafficking [BR:
sluc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116057578 (dctn1b)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
116057578 (dctn1b)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
116057578 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
Motif
Other DBs
NCBI-GeneID:
116057578
NCBI-ProteinID:
XP_031165965
Ensembl:
ENSSLUG00000012994
LinkDB
All DBs
Position
18:complement(7549750..7607792)
Genome browser
AA seq
1277 aa
AA seq
DB search
MSQTRRNTYTRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGQHGTVAYIGNTLFASGKWV
GVILDEAKGKNDGTVQGKRYFTCAENRGIFVRQSQIQLVDDGADTTSPETPEPGTGKVPK
REILETPKSTKLRGVKLKKTPAPRKTTARRPKQPSRPAGGKGAASGSASASAGEMSSSEP
STPAQTPLAAPVIPTLHSPGNPPAPVPTKEDVTMETQEEEALRVQVKDLEEKLETLKMKR
TEDKAKLKELEKHKIQLEQLQEWKNKMQEQQAELQKQLKEAKREAKEALEAKEHYMEEMS
DTADAIEMATLDKEMAEERAESLQLEVDSLKERVDELTMDLEILKHEIEEKGSDGAASSY
HVKQLEEQNGRLKEALVRMRDLSSSEKQEHVKLQKQMEKKNVELDTLRSQKEKLQEEMTA
AEKTIDELKEQVDAALGAEEMVEMLTERNLDLEEKVREMRETVTDLEAINEMNDELQENA
RETELELREMLDLGAAKVRESEKHVEAAQETVADYQQTIKKYRELTAHLQEVNRELTSQQ
EASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVSQANRHVSLLTSFMPESFLR
HGGDHDCILVLLLMPRLICKAELISKQAQEKFDLNENCVERAGLKGAVGEQLSFAGGLVY
SLSLLQATLHKYEHALAQCSVDVYKKIGALYPEMSVHERSLDFLIDLLHKDQLDETVNVE
PLTKAIKYYQHLYSIHLADQNEDCTMQLADHIRFTQSALDCMAVEVGRLRAFLHAGQEKA
DLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALDFGQQVCDTLSDCRKHLTWVV
AVLQEVAAAGAQMMSPLGEQEGLSAVKLEDVAFKAGEQIYGSQGANPYDCLRQSCGIVIA
TMNKMATAMQEGEYDSERPQNKNPLPVDLRGAALRAEITDAEGLGLKLEDRETVIKELKK
SLKIKGEELSEASVRLSLLEKKLDSSSKDADERVEKIQTRLDDAQTLLKKKEKEFEETMD
ALQADIDQLESEKAELKQRINSQSKMTVDGLRGTGPSGIASIVTGVAGEEQKVNMMSGVS
SGSGVQVVDSPLLTQQIEAQRLCIKHLKNDNNRLKAEKMRAQLASLPPLHVTKLPSRDGG
HPKVLSSALYRKTDQLLETLLQMSANVKVVDITGKSPVIPSAQLLEQTARLQSLSDTLGR
LKDEVAEHVVHQQPGARVPSDFATFPSTSFVKAKEEKQGDTVLVGRVMVPCTRGQEQVHR
LVLSQSQLQRVHSLLRT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagactaggaggaacacatacacccggaccaccagcagcggcagcagcaggatg
agctcggacgggggcgggcgtcccgtcaaagtgggctccctggtggaggtgattgggaag
gggcagcacggcactgtggcctacatcggcaacactctgtttgcctccggaaaatgggtg
ggagtcatcctggacgaggccaagggcaagaacgacggcaccgtgcagggcaaacgctac
ttcacctgcgcggagaatcgtgggatatttgtgagacaatcacagatccagctggttgat
gatggggccgacacaacgtctccagagacgcctgagcctggcacaggcaaggttcccaaa
cgagagatcctggagacgcccaagtccactaaactgcgaggagtgaagcttaaaaagact
cctgcaccccggaagactacggccagaaggccaaagcagcccagccgacctgcaggggga
aagggggctgcgtccggttcggcctcggcctctgcaggggagatgagcagcagcgagccc
agcactccggcccagacccctctggcagctccggtcatccccaccctccactcccctgga
aaccctccagcacccgtccccaccaaggaggacgtcactatggaaacacaggaggaggag
gcgctgcgtgttcaggtgaaggacctggaggagaagctggagacactgaagatgaagcgg
acggaggacaaggccaagctgaaggagctggagaagcacaagatccagctggagcagctg
caggagtggaagaacaagatgcaggagcagcaggccgagctgcagaaacaactcaaagag
gccaagagggaggcaaaagaagccctggaggcgaaggagcattacatggaggagatgtcg
gacacagcggatgcgatcgagatggccacactggataaggagatggccgaggagagggcc
gagtctctgcagctggaggtggactccctcaaagagagggtggacgagctcaccatggac
ctggagatcctcaagcacgagattgaggagaaaggctcggatggtgctgcctccagttac
catgtgaaacagctggaagagcagaatggcagactgaaggaagcactggtcaggatgcgt
gacctgtcgtcgtcagagaagcaggaacatgtgaagttgcagaagcagatggagaagaag
aacgtggagctggacactctgaggagccagaaagagaaactgcaggaggagatgacggcg
gcagaaaagaccatcgacgagctcaaagaacaggtggatgcagctctgggggcggaggag
atggtggagatgctgacagagagaaacctggacctggaggagaaagtcagggagatgaga
gagacggtcactgacctggaagctataaatgagatgaacgatgagctccaggagaacgcc
cgagagacggagttggagctgagggagatgttggatctgggagctgcgaaagtccgagag
tctgagaaacacgttgaagctgcgcaggagaccgtagccgattaccagcagaccatcaag
aaataccgcgagctcacagctcacctgcaggaggtgaacagagagctgacgagccagcag
gaagcctcagcagagttgcagcagcagccgccggcggagatgtttgatttcaagattaag
tttgcagagaccaaggcctacgccaaggccattgagatggagctgaggaagatggaggtc
agtcaggccaacagacacgtttcccttctgacctccttcatgcccgagtccttccttcgt
catggcggagaccacgactgcatcctggtgctgctgctcatgcccagactcatctgcaag
gccgagctgatcagcaaacaggcccaggagaagtttgacctgaatgagaactgtgtggag
cgagccgggctgaagggagcggtcggggagcagcttagcttcgctggcggtttggtctac
tcgctcagtctgctgcaggctacactgcataaatacgagcatgctctggctcagtgcagt
gtggatgtctataagaagatcggcgctttgtacccggagatgagcgtccacgagcgttct
ctggatttcctcatcgacctgctgcacaaagaccagctggacgagacggtcaacgtggag
ccgctcaccaaggccattaaatactatcagcacctgtacagcatccacctggcagatcag
aacgaggactgcaccatgcagctggctgatcacatcagatttacccagagtgccttggac
tgtatggcggtggaggtgggtcgtctgcgggcgttcctgcatgcgggccaggagaaggcc
gacctcgccgtgctgctgaaggacctggagacgtcctgcagcgacatccgacagttctgc
aagaagatccgccgcaggatgcccggaaccgacgcgccgggcatcccagcagcactcgac
ttcggacaacaggtgtgcgacaccctctccgactgtaggaaacacctgacctgggtggtg
gccgtgctgcaggaagtggcagcagctggagctcagatgatgtctcctctcggtgaacag
gaggggctgtcggccgtcaaactggaggatgtggcgttcaaggcaggagagcagatttat
ggatcccagggtgccaacccctacgactgtctgcgccagtcctgtggcatcgtcatagca
accatgaacaagatggccaccgccatgcaggagggagaatatgactcagagaggcctcaa
aacaagaaccctctacctgtggatctgcgaggggcggctcttcgagctgaaatcaccgac
gccgaaggtctcggcttgaagctggaggacagagagacagtcatcaaagagctgaagaag
tctctcaagatcaagggagaggagctgagcgaggcgagcgtccgtctcagtctgctggaa
aagaagctggacagttcgtccaaggacgcagacgaacgcgttgaaaagattcagactcga
ctggacgatgcccagactctgctgaagaagaaagagaaggagtttgaggagacgatggac
gctctgcaggccgacattgaccagctggagtcggagaaggccgagctgaagcagcgaatc
aacagccaatccaagatgaccgtcgacgggctgagaggaaccgggccgtcaggaatcgct
tccatcgtcacaggagtggcaggagaggaacaaaaagtgaacatgatgtcgggcgtcagt
tctggttcgggtgtccaggtggtcgactctcctctgctgactcagcagattgaagctcag
agactctgcatcaaacaccttaagaacgacaacaacaggctgaaggctgaaaagatgcgt
gctcagctcgcctctctgcctcctcttcacgtgaccaaacttccctccagagacggaggt
caccctaaagtgctctccagcgccctctaccgcaagaccgaccagcttctggagactctg
ctgcaaatgagtgccaacgtcaaggtggtggacatcactgggaaatctccagtgatacct
agtgctcagctcctggaacagacagctagattacagtccctgagtgacactctgggcaga
ctgaaggatgaagtagcagagcacgttgtccaccagcaacctggagctcgagtcccgtct
gattttgcgacgtttccttcgacctcgtttgttaaggcaaaggaggagaagcagggcgac
acagtgctggtgggtcgggtcatggtgccgtgtacccgcggtcaggagcaggtccaccgg
ctcgtcctatcccagtctcagctgcagagagttcacagtctgttgcggacctaa
DBGET
integrated database retrieval system