Sander lucioperca (pikeperch): 116057629
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Entry
116057629 CDS
T07345
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116057629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116057629
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116057629
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
HECT type E3
116057629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
116057629
NCBI-ProteinID:
XP_035858602
Ensembl:
ENSSLUG00000026041
LinkDB
All DBs
Position
7:complement(28169291..28180465)
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AA seq
1017 aa
AA seq
DB search
MFAWGEDSQRGFRLKDGSNVDSTPTTDNGVHLLNVSYHITDLCGGHNVLAFVKSNGNSFI
IRTNVSKDGRRARGKQKFVECKEKIQAVRCGDDMVTLLSERGKVLCVDATRTYVPRPLEA
LCKIPVCQVACGSQHSVALTKDGQVYTWGQDSKGQLGLGKRKPGANSPQHLRSLSALPLV
QIAAGGEQSFALSVSGGVFGWGRNHCGQLGLGDTTDRHTPTPVHCLNMKETIHISCGKDH
TAILTKTGAVFTFGSGQYGQLGHNSFRDELRPRLVAELWGAKVTKTACGRHHTLVLTDSK
RVYSFGCGEQGQLGHGEESHPSVPLPVQLPQDTTDDPKVRNIFAGGNCSFATCRSNEDLH
EEANNDVTRHCLDDVIDKWTSECDSKSWKKIKQEIHRMFSSASCLNASFLEQSKDKHFQT
SSKFSGLNLSLARRAFKKLVKKDNVFAELEAAVLHLLPCLDKKPVGVEGLRIYLLLNELL
HVIQRHKQQKMSTKLSEVVAAAVINLSADSIQVIGDWWSSLSPSTMVRHVKVWKQALSLI
LSYEPVPRNSGVRNLLLVLQYMYNANSRIAEPRKMPESDFCLLIDKDFLHEDLRLWHLRS
QRKNMHAEPLILCSFPILMDLESKQFAFDMSVEITRLEAIQRTYLDLFWEYGCIPPLQDL
LFQLNVRRGSVLEDTLELLAVACHSDYKLPLVIDFDENLTMDDIQLYKKDFFHEVFHEMV
SVEYGMFMFNNSETLAWFPSKATQEVKRYFQFGLLCGLAMVNQCIIHLPFPLALFKKLLG
VKPSLADMIEFSPCVGKSLLEILEDYEDNVIESLYMDFKINWDGTEVDLDLDNPEKPVTG
QNKKEFVDAYVNHVFNASVESVFQEFKRGFFQVCDRDLVKLFRPKELQEVLVGKDFQDWA
KLKQNTVYEGEYNTTPPHPTIQMFWEVFDELTEDQKKAFLWFVTGFERVPFLKMEKIKMT
VKVQQVQDLSYDQYYPMTHTCFSTLELPLYSTKEIMQTKLTEALSNNRRIYKEDLTL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcatggggagaggacagtcagcggggctttcgcttaaaagatggctcaaatgtc
gacagtacacctacaacagataatggggttcatcttttgaacgtcagttatcacatcacg
gatctgtgcggaggtcacaacgtgctggctttcgtcaaaagtaacggaaactcgttcatt
attcgcacaaatgtgagcaaagatgggagaagagcccgaggaaaacagaagtttgttgag
tgtaaagagaagattcaggctgtgaggtgtggtgatgatatggtcacactgctgtctgag
agaggaaaagttctctgtgtggacgcaactcgcacttacgttccaaggcccctggaagct
ttgtgtaaaataccagtttgtcaggttgcttgtgggagccagcattcagttgctctgacc
aaagatggtcaggtgtatacatggggccaggactccaagggccagctgggtctggggaag
aggaagcccggcgccaattcaccccaacacctccgatccctgtcagcactccccctggtc
cagatcgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggc
tggggcagaaaccactgtggacagctcgggctgggagacacaacagacagacatacacca
actcctgttcattgcctgaacatgaaggaaacaattcatatttcctgtggaaaggaccac
actgccattttgacaaagactggtgcagtgtttacatttggctctggccaatatggacag
cttgggcacaactcattcagagatgaactacgacctcggcttgttgcagagctctggggg
gcaaaggtcaccaagactgcatgtggacgacatcacacattagtgttgacagactccaag
agggtctactcctttgggtgtggagagcaggggcagctgggacatggagaggagagtcat
ccatctgtgccgctacctgttcaactgccacaggacaccactgatgatcctaaagtcaga
aacatcttcgcaggaggaaactgttcgtttgcaacatgcaggtctaatgaggaccttcat
gaggaggcaaacaacgatgtaacacggcattgtctcgatgatgtgattgacaaatggacc
tctgaatgtgattcaaagtcatggaaaaagataaaacaggaaattcacaggatgttctcc
tctgcatcttgtttgaatgcaagctttcttgagcaaagcaaagataaacatttccagact
tcatcaaagttctctggcttgaacttgtcacttgcacgacgagctttcaagaaactggta
aagaaggacaatgttttcgcagagcttgaggctgctgtcctgcacttgcttccttgcctt
gataagaagcctgtgggagtggagggattgagaatctacctgcttctcaatgagctcctg
catgtgatccagagacacaaacagcaaaaaatgagcacaaagctttctgaggtggttgct
gctgctgtaataaacttgtctgctgacagcatccaggtcataggggactggtggtcctca
ctgtcaccttccaccatggttagacatgttaaggtgtggaagcaggccctctcactgatc
ctgtcctatgagcctgttcctcgcaactctggagtcagaaacctgctactagtcctccag
tacatgtacaatgccaacagcaggattgcagagcctcgaaagatgccagaaagtgatttt
tgtttgttgattgacaaagactttcttcatgaggatctgcggctttggcatttacggtca
caacgcaagaatatgcatgctgagccacttatcctttgtagctttccaattctgatggat
ctggagtcaaagcaatttgcttttgacatgagtgttgaaatcaccaggttggaagcaata
caacgcacctacttggatttgttttgggaatatggatgcattcccccgcttcaagacctg
ctctttcaactgaacgtgaggcgaggatcagttttggaagacacccttgaactactggct
gttgcttgtcacagtgactacaagttgccacttgtgattgattttgatgaaaaccttaca
atggatgatatacagctctacaaaaaagacttttttcacgaagtgtttcacgagatggtg
tcagttgaatatgggatgttcatgttcaacaactccgaaacgctggcatggttcccttcc
aaagcaacacaggaggtcaagagatacttccagtttgggcttctgtgtggattggctatg
gtcaaccagtgcatcatacacctaccattcccattggctctgttcaagaagctgctcggt
gtcaagccttcactggcggatatgatagaattcagcccatgtgttggaaagagtctgctg
gaaatcctggaagactacgaagacaatgtcatagaaagtctctacatggatttcaaaatc
aactgggatgggacagaggttgaccttgatcttgacaatcctgaaaagccagtgacaggt
caaaataagaaggagtttgtggatgcctacgtgaatcatgtcttcaacgcatcagtggag
agtgtgtttcaggagttcaagcgtggcttcttccaggtgtgtgacagggatttggtgaag
ctgtttcgaccgaaggagctgcaggaggtgctggtgggcaaagacttccaagactgggca
aagctgaaacagaacacagtttatgagggggagtacaataccacaccaccacaccccacc
atacagatgttttgggaggtttttgatgaactaactgaagatcaaaagaaagctttcctt
tggtttgtgactggttttgaaagggtgccgtttcttaaaatggaaaagatcaagatgact
gtcaaagttcaacaagtccaggacctctcctacgaccagtactaccctatgacacacaca
tgtttctcaaccctggagctacccttatactcaaccaaggagatcatgcaaaccaagctg
acagaggccctgagcaacaacagacgaatctacaaggaggacttaacactttaa
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