Sander lucioperca (pikeperch): 116057646
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Entry
116057646 CDS
T07345
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116057646 (pole2)
03410 Base excision repair
116057646 (pole2)
03420 Nucleotide excision repair
116057646 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116057646 (pole2)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116057646 (pole2)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116057646 (pole2)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116057646 (pole2)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116057646 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
116057646
NCBI-ProteinID:
XP_031166068
Ensembl:
ENSSLUG00000015910
UniProt:
A0A8C9Z995
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Position
18:complement(19812617..19819894)
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AA seq
528 aa
AA seq
DB search
MDVARKIKTKVSAGFKMRGLILRPDASRYLVEALESVNASELDDIIEKVLDAVEKQPLSS
SMIELSVVEIAVQDCTQSCDETIDNVFNIIGAFDVPRYIYSVERKKFVPISMTSHSAPSL
CGLAKDKAELFRERYTILQQRIHRHQLFTPPAIGAAVEEGQNKFQLKTIEALLGSTSKLG
EVIVLGMVTQMKEGKFFLEDPSGTVQLDMSKAQFHNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTEPSSGTRAYYGNLNFFGGPSTTSVKASAKLKQLEEENEDAMFVIVSDVWLDSVE
VMEKLNIMFSGYASMPPTCFILCGNFSSAPYGKTQIKSLKESLKALADAICAYPSIHNSC
RFVFVPGPEDPGPGTILPRPPLADHITEEFRQRVPFSVFTTNPCRIQYCSQEIVVIREDL
VNKMCRNCVRLPSNNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVIV
FADKYDPFSIKNTDCLCVNPGSFPRSGFTFKVYYPSSRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgctcgcaaaataaagacaaaagtgtccgctggattcaaaatgcggggactt
atactacgacctgacgccagcagataccttgtggaggccctggagtctgtcaatgcctct
gaactggatgatattattgaaaaggtcctggatgcagttgaaaagcaaccattgtcctct
agtatgatagagctgtctgtggtggagattgctgttcaggattgcactcagtcttgtgat
gaaaccatagataatgttttcaacatcattggagcttttgatgtgcccagatacatttac
agtgtggagcggaagaaatttgtacccattagtatgacaagccattcagcacccagtctg
tgtggtttggccaaagacaaagctgaactgtttagggagcgctacaccatcttacaacag
cgtatacatcggcaccagctcttcaccccacctgcaataggtgctgctgttgaagaaggt
caaaacaaatttcagctcaagacaattgaagcactgcttggtagcacatctaaactggga
gaggtgattgtactagggatggtcacacaaatgaaagagggtaaatttttcttggaggac
ccaagtggaacagtacagctcgacatgtccaaagcacagtttcataatggcctgtacaca
gagtcctgctttgtactggcagagggttggtatgaggactcggttttccacgtcaatggc
ttcgggtttccaccaacagagccgtcatcaggcacaagggcatattacggcaatctcaac
ttctttggtggtccatccaccacttcggtgaaggcttcagccaagctgaagcagctggag
gaggagaatgaggacgccatgtttgtaattgtttctgatgtgtggctggatagcgttgaa
gtgatggaaaagctcaacatcatgttctcaggctatgcttcgatgccccccacctgtttc
attttgtgtggtaacttctcttctgccccatatggaaaaacccagatcaaatcactcaaa
gagtcattgaaggcacttgctgatgctatatgtgcataccccagcattcacaacagttgt
cgctttgtgtttgttcctggccctgaagaccctggtccaggcacgatcctgccacggcct
cctttggcagatcacatcacggaggagttccgacagagggtgccattttcagtgttcact
actaacccatgcaggatccaatactgcagccaggagatcgtcgtcatcagggaagacctg
gtcaacaagatgtgcaggaactgtgtccggttgcccagtaacaatcttgacattccaaac
cattttgttaagactattctatcccagggtcacttgactccactgcctctgtatgtcagt
cctgttttctgggcgtacgactactccctgcgtgtttacccagtccctgatgtcatcgtt
tttgcagacaaatacgacccattcagcatcaaaaacacagactgcctctgtgtcaacccg
ggttcattcccaagaagtggcttcacattcaaagtgtactacccatccagcagaactgtt
gaggacagcaaacttcaaggattgtaa
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