Sander lucioperca (pikeperch): 116057756
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Entry
116057756 CDS
T07345
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116057756
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116057756
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
116057756
NCBI-ProteinID:
XP_031166224
Ensembl:
ENSSLUG00000025445
UniProt:
A0A8D0DEL8
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Position
9:complement(22183820..22202991)
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AA seq
523 aa
AA seq
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MDGDVAVGVKRGSDELNMYSSSPSSLTANGSDSKKQRLEESPPSRVLHIRKLPNEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLDLAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGETANKDHSLLGTPSGALASYSSGGGYSSSLSLAQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDGLGEDDLRLLFSNSGGTVKAFKFF
QDRKMALIQMTSVEEAIQTLMDLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcggttggtgtgaagagaggctcagatgagctcaacatgtacagt
agcagccccagctctttgaccgcgaacggcagtgacagtaagaaacagcgtttggaggaa
tcccctccctccagagttctccacatcaggaaacttcccaacgaagtgtccgagactgaa
gtcatcgctttggggctgcccttcggaaaagtcaccaatatactaatgctgaaggggaaa
aaccaggcgtttctggagttgggtacagaagaagctgccattactatggtgaactactac
acagcagtcacacctcaggtcagaaacactcctgtcttcatccagtactctaaccataag
gaactgaaaacagactctgctctgaaccagagggcccaggcagtgttgcaggccgtgtca
gcagttcaggatggaagttctccatcctctgaccctggagttttggacctagctccaccc
cccagccctgtcctgcgaattatcatcgacaacatgttttatcctgtgacactggatgtt
ctacaacagatcttcagtaagtttgggacggtaatgaagattataaccttcaccaagaac
aaccagtttcaggctcttctgcaattcagcgatcccgtcaatgcacagcaagctaaactg
tctttggatggacagaacatctataattcatgctgtactctgcggatagacttcagtaaa
ctcgtcaacctcaacgtcaaatacaacaatgataagagtcgagattacaccagacctgac
cttcctactggagacggagagacagccaacaaggatcattctttattgggtaccccatct
ggagcactagcttcctactctagtggaggaggttactcatcttctctctccctcgcgcag
ggtggaggagccatcagtcctctgagcgctgcagcagcagcagcagcagctgctggtcgt
gttgctctgtctgggtccggagtgtcaggagtgctgttggcatccaacctaaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggagtctatggtgatgtacagagggtg
aagatcctctacaacaaaaaggacagtgctctgatacagttgtccgatggcaaccaggct
cagctggctatgagccacttgaatggtcaaaaggtgtttggcaaagtaatgagagtgaca
ctgtctaaacatcaaactgtggctttgcccagagaaggattggatgaccagctactaact
aaagatttctctggctcaccactccatcgctttaagaagccaggatccaaaaactttcag
aacatctttcctccctctgcaacacttcacctctccaatgtccgggatggacttggagag
gatgatctacgccttctgttctctaacagcggaggaactgtaaaggccttcaagttcttc
caggaccgtaagatggccttgatccagatgacgtcagtagaggaagcgatccagactctg
atggaccttcacaactatgacatgggagggaatcatcacctgaaagtttccttttcaaag
tctaccatctaa
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