Sander lucioperca (pikeperch): 116057989
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Entry
116057989 CDS
T07345
Name
(RefSeq) rho GTPase-activating protein SYDE1 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116057989
Membrane trafficking [BR:
sluc04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
116057989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
116057989
NCBI-ProteinID:
XP_035853659
LinkDB
All DBs
Position
22:complement(4034514..4062507)
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AA seq
983 aa
AA seq
DB search
MAEPLLKRTFSRLRGKDQSRRKTDPKLSDVAVKSVLQTSSPAMQTALPLPLSLADAADPP
SPPQNRITVSKKQSWVRQSSAAPPTSLQSSSALRNSDWERQSGISQDATGQAWSQRLAQE
KMEQCGDRLCASPARDMTSAVCFPVSSPPVLQEAPQSAGGSSAVPGSPVSNKFSGQRMYL
QSLDRSSRAWVLSSGKTQASDEARRLQQESSSNIWYNPIPEEEDAAGPRSEDIWRRREET
GDRGAARRTGPESRSSDGPLEGANPSVSHKTDDITTENTDSAPSDSSPASQKKGGVSSSV
IDRLRSPGTVRKLSLKMKKLPELRRKLSLRSASRANRQENDSRAGGDEPASKNSSSSSAN
QNVISRYHLDSSAPPARPLRRSSRGRSAKGGYLSDGDSPELLPRQQAPPITTSQVTACDV
SSFRLYVGSDPPRCSQRVTGLLTVHLLRLDQIKTSRSEDSKDVFLAIQIDGVTRARTSLL
TLRGSSHPLNHAFHLQLERARQLRIVVLAPGNAANPVAAVGGSKSGTDQTSTGPIRNRVC
GLGGVSIPPLFKGSRSQQLCVKLEPRGLLYVKLSLQEKWDTQPSSDSSVPANVFGVELHH
LVEKEGSASPIPLLIQKSVAEIERRGLKVVGLYRLCGSAAVKKELRDWFERNSSAVCLSE
DLYPDINVITGILKDYLRELPSPLITRTLYQVVREAMMLRPPPVPPGTPISPGTPDPDPD
PQLAQSTVELLSCLPPPERATLSLLLDHLSLVASHSASNRMNHQNLAVCFGPVLLTPTQD
AWRGGGGGRGGRGGGKGPGEEMASAVDFKRHIEALHYLLQLWPVPTHRVPEDDHIDVSLP
PCPALTHNSLGPQQQQRHPALRLANPEEEVVVSRRGRGGLARLESPPPINRYAGDWSVCG
RDLLSRQDADYDEVAGSDSDAGSDDEEEEEKKEAWSSEGGGALFVDEFLDFDAPFNCRLS
LKDFDTLIHDLDRELAKQINICL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgctgctgaagagaactttctccagactgagaggaaaagaccagagcagg
aggaagaccgaccccaaactcagcgatgttgcagtaaagtctgtcctccagacatcatca
ccagcgatgcagacggcccttcccctccccctctccctggcggacgccgctgaccccccc
tcgcctccacagaaccggatcacggtttctaagaaacagtcatgggtgcggcagagctct
gcggctccgcccacctccctgcagtcaagctctgccctcagaaactctgactgggagcga
caatcggggatatcccaggatgcaactgggcaggcctggagtcagaggctagcacaggag
aagatggagcagtgtggcgacaggctgtgcgctagtccggcccgggatatgacgagcgcc
gtctgttttcctgtctcttcgcccccagtcctgcaggaagccccccagtcggcaggtggc
tcctcggctgttccgggctcccccgttagcaacaagttctctggccagcgcatgtatctc
cagagcctggaccgcagcagccgagcctgggtgctgtcctcaggaaagacccaggcttca
gatgaggcccgcaggctgcagcaggagagcagcagcaacatctggtacaacccgatcccc
gaggaggaggacgccgctgggccgcgcagcgaggacatctggaggaggagggaggagacg
ggggacagaggggcagcgaggaggacggggccagagagtcgtagcagtgacggtccacta
gagggcgccaaccccagtgttagccacaagactgatgacatcacaacagaaaacacagac
tccgccccctcagactctagccccgcctcccagaagaaagggggcgtgtccagcagtgtg
attgacaggctgaggtctcctggtacggtgaggaaactctccctgaagatgaagaaactt
cctgagctgcgacgcaaactcagccttcgctccgcctctcgagccaaccggcaggaaaac
gacagccgggcgggcggcgacgagccagccagtaaaaactcatcatcgtcgtcggccaat
cagaatgtaatcagcagatatcacctggacagctccgcccctccagccagaccgttgcgg
cgatcatccagaggacgctcggccaaaggaggttatctgagcgatggggactcccccgag
ctgctgccacggcaacaggcccctcccatcaccacctcgcaggtaacggcgtgcgatgtg
agttcgttccgcctgtacgtgggctccgaccccccgagatgcagccagcgggtgacgggg
ttactgacggtgcatctgctgcgcctggaccagatcaagaccagcaggtccgaggacagt
aaagacgttttcctcgccatccagatcgacggcgtgacgagggcgaggacatcactgctg
acgctgcgaggctcctcccacccactgaaccacgccttccatctgcagctggagcgagcc
cgccagctacgcatcgtggtgctagccccaggtaatgcagccaatccagtggcagcagtg
ggcgggtctaaatcagggacggatcagacttcaacggggccaatcagaaacagagtctgc
ggcctcggtggtgtctccatacctccactctttaaagggagtcgcagtcagcagctctgt
gtgaagctggagcccagaggacttctttacgtcaaactgtctctgcaggaaaaatgggac
acacagcccagcagtgactcctcagttcctgccaacgtgttcggcgtggagctgcaccac
ctggtggagaaagaaggatctgcgtctccgatccctctgctcatccagaaatctgtggca
gagatagaacgacgaggactcaaggtggtgggtctgtacagactgtgtggttctgcggcg
gtgaagaaggagctccgtgattggtttgagaggaacagttcagcagtgtgtctcagcgag
gatctgtacccggacattaacgtcatcacagggatcctgaaggactacctgcgggagctg
ccctctccgctcatcaccaggactctgtaccaggtggtcagggaggccatgatgctgaga
ccgccccctgtcccacctgggacccctatctcacctgggacccctgatcctgatccagat
ccccagctagcccagagcaccgtggagctgctgtcctgtctgcctcctccagagagggcc
acgctgtctctgttgctggaccacctcagcctggtggcgtctcacagcgcgtccaacagg
atgaatcaccagaacctggcggtgtgcttcggcccggtgctgctcacgccgacccaggac
gcctggagggggggagggggggggaggggaggaagagggggagggaagggccctggggaa
gagatggcgagtgcagtagatttcaaacgacacatcgaggcgcttcactaccttctgcag
ctgtggccagtgccgacccatcgcgtcccagaagatgaccacattgacgtctccctgcct
ccctgccccgcccttacccataactccctgggcccgcagcagcagcagaggcatcctgcc
ctgcgattggctaaccccgaggaggaggtggtggtttcccgtcggggtcgaggtggcctg
gcccgactggagagtccgccaccgatcaaccggtacgccggagactggagcgtctgtgga
cgagatcttctgtccagacaggatgctgattatgatgaggtggcaggaagtgacagtgac
gcaggcagtgatgatgaagaggaggaggagaagaaggaggcgtggtcatcagaaggagga
ggagctctgtttgtggacgagttcttggattttgatgctccgtttaactgtcgactcagt
ctgaaagacttcgacactctgatccacgatctggaccgagagctggccaaacagatcaac
atctgtctgtag
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