Sander lucioperca (pikeperch): 116058126
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Entry
116058126 CDS
T07345
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116058126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116058126
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116058126
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116058126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
DUF3176
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
116058126
NCBI-ProteinID:
XP_031166647
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All DBs
Position
13:6888213..6984758
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AA seq
820 aa
AA seq
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MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPALRAVIKVTLLNQEQTGKTITLEGVF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPPCLPLLDKARMALDKG
AQAVIFDVSDDANAAAELRETDSLPRPVVLVEAEDAEELMSLVNKNEEAKVRIEIKVEQP
RWPHDVGILLTIVLAILTIVLIFAFRSKCKSNRTWDSVHQQTMRAISRLETKTYSSQGCS
GSQHHQAPWGSASSSNSSPVCAICLEDFQDGQHLRIISCAHEFHKECVDPWLLQHRTCPL
CMHNIMGTERQPQRNRLQQSPEQSQSFLHPQPYSSPRNHPFPQHAIPFSMRPHYPRGPSG
HYPSLGHYTGSSPVDAQTLHFLTSRPLASGCGYHLPAEGPGRPHRIGGNCRTSTHHYTPR
RSCHNYRSSCPAQRSASSSRLHHTASVTPQPRGVPAHSRQDDGSCSGGSYHTERSGYLAD
GPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGPGRAPR
RNSLEADAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHSQGPSRGSD
EEQGGAAAAAAAAAPAPLVLDKDLPVCPPKHSTCQCPKPDPTDRPSPGTECQDHDPSSPA
GPPVLVSPIPLQLQPHCCHQGHGHPPAPLGRVGGCVLDGPSVRFHQSLDLQDDRSIHIHY
GQGPGFCCSPPELHPALLPVPLILDSGGMEDWPCYAGAHVVWQKRVQQARSEPQLLGPGT
SMDRPPCRFHHGPAADRNTDICLYCQTLHYNQGSEEESGV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggccctccgagctgtcatc
aaggtgacactgctgaatcaagagcagacggggaagaccatcactttggaaggggtgttc
gtgggaggaagtgccggctacgcggagggaaaattaatgcagtatcaccctctgtctctg
tgcaacacaagcgaggatgaacgacaagagagtgacttcatcaccattgtcaaactggag
cacagggtacccccctgtctgccgctgcttgataaggcccgcatggcattggacaaagga
gctcaggctgttatctttgatgtcagtgatgatgccaacgctgctgctgagctgcgagaa
accgactcccttccccgtccagtcgtgttggtggaggcggaggatgctgaagagctgatg
agtttggtcaacaagaacgaggaggccaaagttcgtattgagatcaaggtggagcagcct
agatggccacatgatgtgggtatcctgctcaccattgtcctagctattctgaccatcgtc
ctaatatttgctttccgctccaagtgcaagtccaacaggacctgggactctgtccatcag
cagaccatgcgggccattagtcgattggagaccaaaacctacagctcccagggctgctcg
ggctctcagcaccaccaggcaccctgggggtcagccagcagctccaactcgagtcctgta
tgtgctatctgcctggaggacttccaggacgggcagcatttgaggatcatctcctgtgct
catgagttccacaaagagtgcgtcgacccctggctgctacaacaccgcacctgtcccctc
tgtatgcacaacatcatggggacggagcggcagccccagaggaacagactccagcagagt
ccggagcaaagccagagtttccttcaccctcagccttacagcagcccacgtaaccacccc
tttccccagcacgccatccctttctctatgaggccccactatcctcgtggaccctctgga
cattatccctccctgggccactacaccggctcttctcccgtggatgcccaaacactacat
ttcctcaccagcaggccacttgcgtccggctgtgggtaccaccttcctgcagagggtccc
gggaggccccacaggattggaggtaactgcaggacttccactcaccactacaccccacgt
cggtcctgccacaactatcgctcatcctgtccggcccagcgcagtgcatccagctcaaga
ctgcaccacaccgcctccgtcacaccacagccgcgtggagtgccggcccatagccggcag
gacgacggcagctgctcgggtggcagctaccacacagaacgcagcggatacttggctgat
gggccagccagtgactccagctcaggaccatgccacggctcctccagcgactcagttctc
aactgtactgacgtgtccctgcagggggtttatggcagctggtccaccttccgtagctct
ctgagcagtgactatgatccgtttgtgtattacgggccagggcctgggcgcgcccctcgc
aggaacagcctggaggccgatgcccaggcccggcccaggtctctggattctgtggtgaac
aaagcgggctgccccgaggagcagccgcagactgtgttcagccacatccactaccaccgc
cacagacaccaccactatgaggagggggagcacagccagggcccgagcagaggctcggac
gaggagcaggggggcgctgctgctgctgctgctgcagcagcacctgctcctcttgtcctg
gacaaagacttgcctgtctgccctcctaagcacagcacctgccagtgcccaaagccagac
cccacagatcggcccagtcctgggacagagtgtcaggaccatgaccccagcagccctgca
ggacctcctgtcctggtgtctccaatccctttacagcttcaaccccactgctgccaccag
gggcacggacaccctcccgctcctcttgggcgagtgggtggctgtgtgcttgatgggccc
tctgttcgcttccaccagagcctagatctgcaggatgaccgtagcatccacatccactac
ggccagggcccgggcttctgctgctcccctccggagctgcaccctgccttgctccccgtg
cccctcattctggactctggaggtatggaggactggccttgctatgccggggcccatgtt
gtgtggcaaaagcgggtgcagcaggcccgctcagagcctcagctcttggggcctgggacc
tctatggacaggccaccctgcaggttccaccacggccctgctgcagaccgcaacacagac
atttgtttgtactgccaaacattacactacaatcagggatcagaagaggagtctggcgtg
tga
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