Sander lucioperca (pikeperch): 116058133
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Entry
116058133 CDS
T07345
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116058133 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116058133 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116058133 (ncor1)
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116058133 (ncor1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
116058133 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
116058133
NCBI-ProteinID:
XP_031166674
Ensembl:
ENSSLUG00000008713
LinkDB
All DBs
Position
13:complement(7509249..7565706)
Genome browser
AA seq
2411 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPPHSVQYTFTGTRHQQDFAIPDYRNHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQFHSISSQSEHEALDSKRPRMETVAEAHITRTPATAGGIVL
PINHTVQDSLRATVEVKKESQFSVKVESPSSVGPTIHLGDEQDASPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLLDDP
MKVYKARQFMNVWTEHEKEIFKEKFIQHPKNFGLIASYLERKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPSQEDKSDDKNEEDKSEKSDKKEEEEKKDEEEKDEKEDSR
DIGKDKDKCDGGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAASVAAEEAPPPA
PEPALPDPPQLPKSDSMQKSMKEPAKPQTPVVSMDANKAGAGETGETSRWTEEEMEVAKK
GLVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEG
LATVSPDDDDDDEDDDDEDDDNADDSEGGDNSSDTESAPSPSQSADSKRADRTAGDAHCS
DQDKGQASNGKALEPLYGALCVKEEKSPESETGSQEEKARMTSYAGSVHPKTEPQDVDMK
TGEVQVKMEPELKERGEKGDHGERHREINSDNDSSATCSADEDVEAEPERQRIFSMERPT
LLNPPGSVLVSSPKQTQLNIQQMQHRAATIPPMVHGPFGPGGVPISGFAMLQHQIKAVHE
SAHQEEKQRQDQGDLERRQPFNTRSPTVIDRDGKPLPYMPYDMKLALDQEVHSGRPGSPY
RVSPRELSKASPQPDPNAPNASRYSVPPVLHPAPNQLVQSMADGVRVTFSRPSRPPNIPS
PPPLIPTTKPTDKPSFIQGGSISQGTPGTYLPSHAVYGPEGTKSNVGSISLGLPRQQDPN
KPGAAVPSIQDGRGNPSKMGEGLTMRGSITQGTPALPQSSIAADLLKGTITKLATEDLSS
QDKARGEQLSKGHVIYEGKSGHILSYDAIKNPRENTRSPRSGHELKRTYDMMEGPMSRGH
PGREGAPFEGLISRALPREGLHGDSKERPLITGSIMQGTPRTAAETYEDAMKYGKQIKLE
SPPIRSFEGGIGKGKPYEGVNTIKEMGRSIHEIPRQDQSGQDICKTPELSDRRVIEGMSQ
IHPLNQSTIKHNVKSLITSPSKHPHSMPQLEAMERAKYEESKAVRHTVVNSTASVLRSTH
QEAGKSQLSPSMYEDANARRTPVNYSTNPVSRGSPMLGRTPEGVVSSAKSAAHERKSAMT
PTQRDSVPAKSPVLGGDPVASHSPFDPHHRPVGPGEVFRAHLPPHLDPTMAFHRVLDPAF
MFPRQPSPTGYHNTYQLYTMENTRQTILNDYITSQQMQVIRPDMARGLSPREQPVAMPYA
AGARGIIDLAQMPPTILLPHPGGTGTPTLERIAYLPGAQPPFPLRAFNPTSISPGHQAHL
AAAAAASAERERDREQQEKEREREQRERDREREMRERTNEYIRGGVPEQPGRPGSRGYLH
SPSPSLRTQQDVVVQQQQQQQQQQQQQRPSIFQGKSVITSLMPHSAAATAAAQSSSRYST
AADALAALVDAAASAPQMDVAKVKENKHERDDDMSTSAAARRAASISEQQEAERRSMQSP
YGAMSLPGGKPHPTYSEGPGVGVKDKGHPTSKSRIEEELRTRGKTTITAANFIDVIITRQ
IAPDKDSRERGSQSSDSSSSLSSSRYDNTGGGAIEVISPASSPVQPQQDKPEEQQQAPAA
GMRAYDISRYRPSGELPQPSPQQPPSSQIDSYSQVPKTHRVMTLADHISHIITQDFARNQ
DPPPVSSSSSATFQSVMPPVSSSGRAKVSSRYSPENQVQAPHHQRSSSRVSPENAPDKPR
ARPGKSPERSGRQMENYEPISPPQSYQGVDKQEVVGPPPQRREADNSEIRTDSRSPGSVS
YLPSFFTKLENTSPMVKSKKQEIFRKLNSNSGAGDSDVGNAQPGTEIFNLPAVTSSSSIN
TRNHSFSDPASNLGLEDIIRKALMGNLEEKPEEHQGGLGAQGAINNTACTGSETRQEANR
SPSMGKQKQGKANSRKSKSPNLGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRP
SSTGSMQFPYNPLTMRILSSTPPTSIASPSIQSQQQKQQQQPPPAGAQVAQQRVWQSLLS
EQYETLSDSDD
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtagctcgggctacccgcccagccagggcagcttcagcagtgagcagagccgg
tacccaccacattctgtccaatacaccttcaccggcacacgccaccaacaggatttcgcc
atcccagactatcgaaatcacatgcaagatccacagggtcggagaagaccatctttactg
tctgaattccaccctggaactgaaaggcctccagagagacgccatggttacgaacagcag
tttcactccatctcatcccagtctgagcatgaggctttggattctaaacgccctcgcatg
gagactgttgctgaggcccacatcacccgcacgcctgccactgctgggggtattgtcctg
cccataaaccatacagtacaggacagtctaagagccactgtggaggtaaaaaaggaatct
cagttttctgtgaaagtggagtccccgtcctcagtaggacctacaatacacttgggtgat
gagcaggatgcctctccttccaaactatccaaggaggagctgatccagagtatggaccgt
gtagaccgagagattgctaaagtggagcagcagatcttcaagctgaagaaaaagcagcaa
caactggaggaggaagcagcaaagccagtggagccagaaaagccagtgacccctccccca
gtggagcacaagcatcgcagcatagtccagatcatctacgatgagaacaggaaaaaagct
gaagaggcccataaaatactggaaggtcttggtcctaaggttgagctgccgctctacaat
cagccatcagacacaaaggtgtaccatgacaacatcaagaccaaccaagtcatgaggaag
aagctaattttgtttttcaagaggaggaaccacgctcgaaaacaaagggaacagaagatc
tgccagcgctacgaccagctaatggaagcatgggaaaaaaaggtggagcgaatggagaac
aaccccagacgcaaagccaaggagagcagaacacgggagtactatgaaaggcagttccct
gagattcgcaagcagagagagcagcaggagcgcttccagagggttggacaaagaggaacc
ggcctttctgcaacaatagcaagaagcgagcatgagatttctgaaatcatagatggtctt
tctgaacaggagaacaatgaaaaacagatgagacaactgtcagtcatccctcccatgatg
tacgactctgaacagaggcgagtgaagtttatcaacatgaacggcctgttggatgaccca
atgaaggtgtacaaagccaggcagttcatgaatgtttggaccgaacatgaaaaggagatc
tttaaggagaagtttatccaacaccccaagaactttggccttattgcctcctatctggag
agaaagtgtgttgctgactgtgtcctttactactacttgaccaagaagaatcacaactac
aagacgctggtgaggcgaaactatggaagacggagaggaaggaaccagcaaataacacgt
ccctcacaagaagacaagtcagacgacaaaaacgaagaggacaaatctgagaaatctgac
aaaaaagaggaagaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gacattggcaaggacaaagacaagtgtgacggtggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaatagccagggccgccgtaagggaaggatcacc
acacgctccatggccaatgaggctgcatctgtggcggctgaagaggcacctccccctgcc
cctgagcctgccttgccagatcctccgcagctccctaagtctgattcaatgcagaagtcc
atgaaggagcctgcaaaaccccagactccagtagtttccatggatgctaataaagctggt
gctggtgaaaccggagaaacttctcgctggaccgaggaggagatggaggttgccaaaaaa
gggctagttgagcatgggcgaaactggacagccattgccaaaatggtgggcaccaaaagt
gaggcacagtgcaagaatttctatttcaattacaagagacgtcacaacctggacaacctg
ctccagcagcataagcaggacacacggcgggctcgtgctgataggtctcaaggtgaaggt
ctagccacagtgtcacctgatgatgatgatgacgatgaggatgatgatgatgaggatgat
gacaacgcagatgacagtgaaggcggtgacaacagctcagatacagagagtgctccctcc
ccctctcagtctgccgactccaagagagcagaccgcactgcaggagatgctcattgctct
gaccaggacaaaggtcaggccagtaatggaaaggccctggagcccttatacggagcactc
tgtgtcaaggaagagaaaagcccagagagtgagactggatctcaggaggaaaaggccagg
atgacttcctatgcaggctcagtgcatcccaaaactgaacctcaggatgtggacatgaag
actggagaggttcaggtcaagatggaacctgagcttaaggagagaggagaaaagggagat
catggcgagaggcatagggagatcaactcagataatgactccagcgccacctgcagtgct
gacgaggatgtggaagcagagcctgaaagacagagaatattctccatggaaaggcctaca
ctgctcaaccctccaggctcagtgctggtgtcctcacccaagcaaacccaactcaacatc
cagcagatgcagcatcgggcagctaccatcccacctatggttcatggtccctttggcccc
ggtggtgtgcccatcagtggctttgcaatgttgcaacaccagatcaaagcagtgcatgag
tcagcacaccaagaggagaagcagaggcaggatcagggagacctggagcgcagacagccc
ttcaacacccgcagccccaccgtaatagacagagatggtaagcccttaccctacatgcct
tatgacatgaagctggctctggaccaggaggtccattctggccggccaggctctccctac
agggtctcccctagggagctgagcaaggcctcaccccagcctgaccccaacgcccccaat
gcctcccgctacagtgtgccaccagtcctccaccctgcccccaaccagctggtccagagt
atggcagatggagtccgcgtgacattcagcagacccagtcgacctccaaacattccctct
cctcctccactcattccaaccaccaagcccacggacaagccctccttcatccaaggaggc
tccatctcccagggaactcctgggacatatctgccatcccatgctgtctatgggccagag
gggactaagagcaatgtgggctccatctctctgggtctgcctcggcagcaggatcctaac
aagcctggagctgcagtcccatccatacaggatggcagaggcaacccatcaaagatgggt
gagggtctgactatgagaggatcaatcactcagggcacaccagccctgccccagtccagc
attgctgctgacctcctgaagggcacaattacaaagttggccacagaggacctgagcagc
caagacaaggcaaggggagaacagctgtctaagggtcatgtcatatatgaaggcaagagt
ggtcacatcctctcctatgatgctatcaagaaccccagggaaaacacccgcagccccaga
tcaggccatgagctgaaacgcacgtatgacatgatggagggacccatgagcaggggacac
cctggcagggaaggagctccattcgaggggttgattagcagagccttgcccagagaaggt
ctacatggagattctaaggaaagaccattgatcacaggatccatcatgcaaggaacacct
agaaccgctgcagagacttatgaagatgccatgaaatatggaaaacagataaagctagaa
agcccaccaatccgctcctttgaagggggtattggcaagggcaagccctacgagggagtc
aatactatcaaagagatgggacgctccattcatgaaatccccagacaagatcagtctggc
caggacatctgcaagacccctgaactgtcagacaggagggttattgagggcatgtctcag
attcaccctctcaaccagtctactatcaagcacaatgtcaagtccctcatcaccagtcca
tctaagcatccccacagcatgcctcagctcgaggccatggaacgagccaaatacgaggag
agcaaggcagtacgccacactgtggtcaactccaccgcctctgtcctgcgctccacacac
caggaggccggcaaatcccagctgagcccaagcatgtatgaggacgccaatgctcgcagg
acccctgttaactacagcaccaatcccgtttccagaggatcacccatgttgggacgtaca
ccagagggtgttgtgagctctgcgaaatctgctgcacatgaaagaaagagtgccatgacc
ccgacacagagggacagcgtcccagccaagtccccagtgttgggtggtgaccccgtagcc
tctcacagcccctttgacccccaccaccggcctgttggtcctggggaagttttccgagcc
cacctgcctccacatcttgaccccaccatggcctttcacagagtgctggatcctgcattc
atgttccccaggcagccatctccaacaggctaccacaacacctaccagctgtacaccatg
gagaacacgcggcagacaatcctcaacgattatatcacttcccagcagatgcaagtcatc
cgacctgacatggcccgagggttgtcaccacgggaacagcccgtcgctatgccttacgca
gccggagctcgagggattattgatctagcccagatgcctccaactatcctgttgcctcac
cctgggggaacaggtactcccactttggaacgcatcgcctacctccctggagctcagccc
cctttccctcttagggctttcaacccaacctccatatcgccaggccaccaagcccacctt
gctgctgcagccgctgccagtgcggagagggaacgggaccgggagcagcaggagaaagag
agggaaagggagcagcgggagagggaccgggagcgagaaatgcgggagagaaccaacgaa
tacatacgcggaggtgtaccagagcagccaggccggccagggagtcgaggttatctgcat
tccccttctccctcgctcaggacacagcaggatgtagtggttcagcagcagcagcagcag
cagcagcagcagcagcagcagcggcctagcatcttccagggcaagagtgtcatcacctct
ctaatgccccattcagcagcagcgacagcagcagcacagagtagctctcgctacagtact
gcagctgatgctctggctgctctggtggatgctgcagcctctgccccgcagatggacgtg
gccaaggtgaaagaaaacaaacatgagcgggatgacgacatgtctacttcggctgcagct
cggcgagcagccagcatctctgaacagcaggaggcagaaaggcggtccatgcagtcaccc
tatggtgctatgtctctgccaggaggtaaaccgcatccaacttactctgagggccctgga
gtcggggttaaggataagggccatccgacctcaaagtcccgcatcgaagaggagcttcgg
actcgtggaaagacgactatcacagctgctaacttcatcgatgtcatcatcacacggcag
atagccccggacaaagactcacgagagcgaggctctcagagctctgactcctccagcagc
ttgtcatccagtcgatacgacaacaccggtggaggagccattgaggtgattagtcctgct
agttcaccagtccaaccacaacaggacaaaccagaggaacaacaacaggcaccagcagct
ggcatgcgggcctacgacataagtcgttaccggccatcaggggagctaccacagcccagt
ccccagcagcccccctcttcccaaattgacagctactcccaggtccccaagactcaccgg
gtcatgaccttggcagaccacatttcgcatatcataacccaggactttgcccggaatcag
gaccctcctcctgtctcctcctcatcttcggccacattccagagcgtgatgccacccgtg
tcctcttcagggcgagccaaggtgtccagccgctacagtcctgagaatcaggtccaggcc
ccacaccaccagagatcctccagcagagtttccccagagaatgcccctgacaagcccaga
gccaggcctggaaaatctccagagcgaagcggcaggcagatggagaactatgaacccatc
tctccaccacagagctaccaaggcgtggacaaacaggaggtggttgggcctccaccccag
aggcgagaggctgacaactccgagatcaggactgactcacggtccccggggagtgtcagc
tatctgccttccttcttcaccaagctggagaacacctcgccaatggtgaaatccaagaag
caggagatctttcgtaagttgaactccaactctggtgccggtgattctgatgttggaaac
gctcaaccaggcacagagattttcaacttgcctgctgttacaagctccagcagcatcaac
accaggaatcactcgtttagtgacccagccagtaacctgggcctggaggacatcatccgc
aaagccttgatgggcaacttggaggagaaaccggaagagcaccagggaggactaggggct
cagggtgccatcaacaacacagcctgcacaggcagtgaaacccgccaggaggccaaccgg
tcacccagtatgggaaagcagaagcagggcaaagccaatagccggaaatccaagtcacct
aacctcggtcaggcctacgctggaggggagcgtccctcctcagtgtcctccgtccactcc
gagggagattatcacagacaagcccaagcccagccccaatggagctgggacgaccgaccc
tcatccacaggatccatgcagttcccttacaacccgctgaccatgcgcatactgagcagc
acgccacccacctccatagcttccccctccatacagagtcagcaacagaagcagcagcag
cagccgcctccagctggagcccaggtggcccagcagcgcgtgtggcagtctctgctgtca
gagcaatatgagaccctgtctgacagcgacgactga
DBGET
integrated database retrieval system
