Sander lucioperca (pikeperch): 116058137
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Entry
116058137 CDS
T07345
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X5
KO
K08770
ubiquitin B/C
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03320
PPAR signaling pathway
sluc04120
Ubiquitin mediated proteolysis
sluc04137
Mitophagy - animal
sluc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116058137 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116058137 (ubb)
04137 Mitophagy - animal
116058137 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
116058137 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116058137 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116058137 (ubb)
Ubiquitin system [BR:
sluc04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
116058137 (ubb)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of breast milk
116058137 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
116058137 (ubb)
Exosomal proteins of colorectal cancer cells
116058137 (ubb)
Exosomal proteins of bladder cancer cells
116058137 (ubb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
116058137
NCBI-ProteinID:
XP_031166684
LinkDB
All DBs
Position
13:7582253..7587782
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AA seq
610 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGANMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTI
ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKT
LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL
HLVLRLRGGQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcactggcaagaccatcacccttgaggttgagcccagc
gacaccattgagaacgtgaaggctaagatccaggacaaggaaggcattccccctgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtcctacgtctgaggggaggcatgcaaatcttc
gtcaagaccctcactggcaagaccatcaccctggaggttgagcccagcgacacaattgag
aatgtcaaggctaagatccaggacaaggaaggcattccccctgaccagcagaggctgatc
ttcgccggcaagcagctggaagatggccgcaccctctctgactacaacatccagaaagaa
tccactctccatcttgtcctgcgtctgaggggaggcatgcagatcttcgtcaagaccctc
actggcaagacaatcaccctggaggttgagcccagcgacaccattgagaatgtcaaggct
aagatccaggacaaggaaggcattccccctgaccagcagaggctgatcttcgccggcaag
cagctggaagatggccgcaccctctctgactacaacatccagaaagaatccactctccat
cttgtcctgcgtctgaggggaggcatgcagatcttcgtcaaaaccctcactggcaagacc
atcaccctggaggtggagcctagtgacaccattgagaatgtcaaggctaagatccaggac
aaggaaggcattccccctgaccagcagaggctgatctttgccggcaagcagcttgaagat
ggccgtaccctctctgactacaacatccagaaagaatccactctccatcttgtcctgcgt
ctgaggggaggcatgcagatcttcgtcaagaccctcactggcaagaccatcaccctggag
gttgagcccagcgacaccattgagaatgtcaaggctaagatccaggacaaggaaggcatt
ccccctgaccagcagaggctgatcttcgccggcaagcagctggaagatggccgtaccctc
tctgactacaacatccagaaggagtccaccctccatcttgtcctgcgtctcaggggtgca
aacatgcagatcttcgtcaagaccctcactggcaagaccatcaccctggaggtggagcct
agcgacaccattgagaacgtgaaggccaagatccaggacaaggaaggcattccccctgac
cagcagaggctgatctttgccggcaagcagcttgaagatggccgcaccctctctgactac
aacatccagaaggagtccaccctccatcttgtcctgcgtctcaggggaggcatgcagatc
ttcgtcaagaccctcactggcaagaccatcaccctggaggtggagcctagtgacacaatt
gagaacgtgaaggccaagatccaggacaaggaaggcattccccctgaccagcagaggctg
atcttcgctggcaagcagctggaagatggccgtaccctctctgactacaacatccagaag
gagtccactctccatcttgtcctgcgtctgaggggaggcatgcaaatcttcgtcaagacc
ctcactggcaagaccatcaccctggaggtggagcctagcgacaccattgagaatgtcaag
gccaagatccaggacaaggaaggcattccccctgaccagcagaggctgatcttcgccggc
aagcagctggaagatggccgtaccctctctgactacaacatccagaaagaatccactctc
catcttgtcctgcgtctgaggggcggtcaataa
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