Sander lucioperca (pikeperch): 116058157
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Entry
116058157 CDS
T07345
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X3
KO
K04646
clathrin heavy chain
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04142
Lysosome
sluc04144
Endocytosis
sluc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116058157 (cltca)
04142 Lysosome
116058157 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116058157 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116058157 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116058157 (cltca)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116058157 (cltca)
Exosome [BR:
sluc04147
]
Exosomal proteins
Proteins found in most exosomes
116058157 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116058157
NCBI-ProteinID:
XP_031166716
Ensembl:
ENSSLUG00000001226
LinkDB
All DBs
Position
13:complement(6072112..6114416)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPSNIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAG
GEELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASV
LLESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKDLVKEAIDSYIKADDPSAYME
VVQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMM
NHPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQ
EDKKECFAACLFSCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSETV
RKEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAGYSQPAVQPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactacctattcgctttcaggagcacctgcagctccaaaatttagggatc
aatccatccaacataggcttcagcaccctaaccatggagtcggataagttcatctgtatt
cgggagaaggtgggtgagcagactcaggtggtgatcattgacatggcagaccccaataca
cctatccgcaggcccatctcagctgacagcgccatcatgaatccagccagcaaagtcatt
gcacttaaagacgccgccaaaacccttcagatcttcaacatcgagatgaaaagcaagatg
aaggcacacaccatgacggacgatgttaccttctggaagtggatctcccttaacacagtt
gcacttgtgactgacaatgccgtctaccactggagcatggagggtgactcacagcctgtg
aaagtcttcgaccgccactccagcctggcaggctgccagattatcaactaccgcactgac
gccaagcagaaatggctcctgctcatcggcatctcagcccagcaaaatcgggtggttgga
gccatgcagctgtactctgttgacagaaaggtttctcagcccatcgaaggccatgctgcc
agctttgcccagttcaagatggaggggaatacagaggagtcaactttgttctgctttgct
gtcagagggcaggctggagggaagttgcatatcattgaagtggggaccccaccaactggc
aaccagccatttccaaagaaagcagtggacgtgttcttccctccagaagctcagaacgac
tttcctgtggccatgcagataagctccaagcaagatgtggttttccttattaccaaatat
ggctacattcacctgtatgacttggagacaggcacctgcatctacatgaaccgcatcagt
ggggagaccatctttgtcaccgctccacacgaggccacctcaggcatcattggggtcaac
aggaagggacaggtgctgtcagtctgtgtggaagaggaaaatatcatcccctacatcact
aatgtgctccagaatccggacctggctctccgcttagctgtccgcaacaaccttgctggt
ggtgaagagctctttgcacgcaagtttaacaacctgtttgctgctggcaactactctgag
gctgccaaggttgctgccaatgcaccgaagggtatcctgcgaaccccagacaccatccgt
cgcttccagagcgttcccactcagccaggccagacctcccccttgctgcagtactttggt
atccttttggaccagggccagctcaacaagtttgagtcccttgagctttgcaggcctgta
ctccagcagggacgaaagcagctcctggagaagtggctaaaggaagacaagttggagtgt
tcggaagaacttggtgacctggtgaaggcagtggatcccaccttggctctcagtgtctac
ctgagggccaacgtccccaacaaagtcatccagtgctttgcagagactggtcagttcccc
aagatcgtcctgtacgccaagaaggtgggctacactccagactggatctttctgctcagg
aatgtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgctggtccaggat
gaagagccactggctgacatcacacagatcgtggatgtattcatggagtacaacctgatc
cagcagtgcacctcattcctcctggacgcgctgaagaacaacagaccctcagaagggcca
ctgcagactcgcctgctggagatgaacctcatgcatgctccacaggttgctgatgctatc
ctgggcaaccaaatgtttaccaactacgatcgtgcccacatcgcccagctgtgtgagaag
gctggactcctgcaaagggccctggagcactacaccgacctgtatgacatcaagcgcgct
gtggtgcacacacacctgctcaacccggagtggctggtgaacttctttggcgcgctgtcg
gtggaggattccctggagtgcctcagggccatgctgtcggccaacatccgccagaacctg
cagatctgcgtgcaggtggcttccaagtaccatgaacagctcaccacacagtctctcact
gagctttttgagtccttcaagagctttgaaggtctgttctacttcctgggctctattgtg
aacttcagtcaggaccctgaagttcactttaaatacattcaggcggcctgcaagacgggt
cagatcaaagaggtggagaggatctgtcgagagagcaactgctacgaccctgagcgtgtc
aagaacttcctcaaggaagccaaactcaccgaccagctaccactcatcatcgtctgcgac
cgcttcgactttgtccacgacctggtcctctacctgtaccgcaacaacctgcagaagtac
attgagatctatgttcagaaggtgaatcctagccgtctgcctgttgtggtcggtggtctc
ctagacgtggactgctcagaggatgtcatcaagagcctgatcctggttgtacggggacag
ttctcaactgatgaactggtcgctgaggtggaaaagagaaacagactgaagctgctgctg
ccctggctggagtctcgtatccacgaaggctgcgaggagcctgccacccacaatgctctg
gccaagatctacattgacagcaacaacaaccctgaacgattcctgagggaaaacccgtac
tatgacagccgtgtggtgggaaagtactgcgagaagagagacccccacctggcctgtgtg
gcctacgagagaggacagtgcgaccaggagttgatcaatgtctgcaacgagaactccctg
ttcaagagcttgtctcgttacctggtccgccgcaaagaccctgacctctgggccagcgtg
ctgctggagagcaaccccttcagacgaccactcattgaccaggtggtgcagacagcactg
tcagaaacccaggacccagaggaggtgtctgtcacagtcaaggccttcatgaccgcagac
ttgcccaacgagctcatcgagctgctggaaaagattgtgttggacaactctgttttcagt
gaacacagaaatctgcagaacctgctgatccttacagcgatcaaagctgaccgtacccgc
gtgatggagtacatcagcaggctagacaactatgacgctcccgatatcgctaacattgcc
atcagcaacgagctcttcgaggaggcttttgccatcttcaagaagtttgacgtcaacacc
tctgctgtgcaggtgctgatcgaacatattggcaacctggaccgggcctatgagtttgca
gaacgctgcaatgagccggctgtgtggagccagctggctaaggctcagctacagaaggac
ttggtcaaagaggccatcgactcctacatcaaagccgatgatccctctgcatacatggaa
gtggtacaggctgctgataagagcggtaactgggaggacttggtcaaattccttcagatg
gctcgtaagaaggcccgtgagtcctacgtggagacagagctcatctttgccttggccaaa
accaatcgtctggctgaactggaagagttcatcaacggacccaacaatgctcacatccaa
caggttggtgaccgctgctacgatgagaaaatgtacgatgctgcaaagctgctatacaac
aacgtctccaactttggtcgtctggcttcaactctggtgcacctcggggagtaccaggct
gctgtggacggcgcccgtaaagccaacagcacccgcacctggaaagaggtgtgcttcgcc
tgcgtggatggaaaggagttcaggcttgcccagatgtgcggtctccacatcgtggtgcac
gctgacgagctggaggagctgatcaactactaccaagaccgcggttactttgaggagctg
atcaccatgctggaggccgccctgggcctggagcgcgctcacatgggcatgttcacggag
ctggccatcctttactccaagttcaaaccccagaagatgagggagcatctggagctcttc
tggtccagagttaacatcccgaaggtcctgagagcagctgagcaggctcacctgtgggcc
gagctggtcttcctgtatgacaagtacgaggagttcgacaacgccatcatcaccatgatg
aaccacccgacagatgcctggaaggaggggcagttcaaagacataatcaccaaggtggcc
aacgtggagctgtactacaaagccacccagttctatctggagttcaagcccttgttactg
aatgatttgcttatagtgctttcccccagactggaccattcccgtgctgtcaacttcttc
acaaaggtgaaacagcttcctctggtcaaaccctacctgcggtcagtacagaaccacaac
aacaaatcagtcaatgaagcacttaacaacctcttcatcacagaggaggactatcaggca
ctgaggacatcaatagatgcctacgacaactttgacaacatctcactggcccagcgtttg
gagaagcacgagctgatcgagttcaggagaatcgctgcttacctcttcaagggcaacaac
cgctggaaacagagtgtggagctctgcaagaaggacaagctctataaggatgccatgcag
tatgcgtccgagtccaaggacatcgagctggcagaggagctgctgtcctggttcctgcag
gaggacaagaaggagtgtttcgccgcctgcctgttcagctgctatgacctgctgcggccc
gacgtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatatttc
attcaggtcatgagggagtacctcagcaaggtagataaactagaaacctccgagaccgta
aggaaagaagaggagcaggcaacagagacgcaacccatcgtctacggcacaccccagctg
atgctgacggcgggccccagcgtacctgtggcccctcagcaagcttacggctacggctac
caggctcctgcaggatacagtcagccagcggttcagccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system
