KEGG   Sander lucioperca (pikeperch): 116058221
Entry
116058221         CDS       T07345                                 
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc04140  Autophagy - animal
sluc04142  Lysosome biogenesis
sluc04148  Efferocytosis
sluc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    116058221 (vps11)
   04140 Autophagy - animal
    116058221 (vps11)
   04148 Efferocytosis
    116058221 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116058221 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sluc04131]
    116058221 (vps11)
Membrane trafficking [BR:sluc04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    116058221 (vps11)
   Hops complex
    116058221 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin Beta-prop_WDR3_1st zf-C3HC4_2 Beta-prop_WDR36-Utp21_1st zf-rbx1 zf-C3H2C3 zf-RING_2 Beta-prop_IFT122_1st zf-C3HC4 zf-RING_5 Beta-prop_EML_2 ADIP TPR_GEMI5 zf-ANAPC11 Rab11-FIP3 zf_RING_Vps8_fungal Beta-prop_VPS8 zf-RING-like CC_Bre1 Kbp-5
Other DBs
NCBI-GeneID: 116058221
NCBI-ProteinID: XP_031166826
Ensembl: ENSSLUG00000022873
UniProt: A0A8D0A8T6
LinkDB
Position
13:798980..815188
AA seq 926 aa
MAAFLQWRKFVFFDKDTVKDPVDNGKNFVFPSGVSACDSGRGHIVLGDMDGKIWLLTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLEKRDSGNPLCTRIFPAI
PGSKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLTDPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDAKSPNKTEFGSRENSPSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
AYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTLLLKGLCTNYQPSGDTAEKDSLGRGLVNKANSEEFIPIFANNPRELKAFLEHMIE
VEPRSPQGVYDTLLELRLQDWAHEQDPVRKKVLQGEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
TYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGNLEVNLQRDLLIHTKRNC
NT seq 2781 nt   +upstreamnt  +downstreamnt
atggcagcgttcttacagtggagaaaatttgttttctttgacaaagacacggtgaaggat
cctgtggataatgggaaaaactttgtttttccaagcggagtatcggcttgtgactccggc
cggggtcatattgttctgggagatatggatggcaaaatctggcttttgacgcgctccctg
cagttgacatcttttcaggcctacaagttgcgggtaactcatctctaccagctgaagcag
cacagcatccttgtgtcagtggggcaggatgaacagggaataaaccctctagtaaaggtc
tggaaccttgaaaagagagacagtggaaatcctctgtgcactaggattttccctgcaatt
cctggcagcaaaccgactgaagtgtcttgcctcagtgtacacgaaaacctcaacttcatg
gctattggcttcacagatggcagtgtggttttgaccaaaggtgacatcaccagagatcga
cacagtaaaactctgactctgcacgagggaaccagcccagtcacaggccttgctttccgc
caagtggcaaaggtcacacatctgtttgttgccactctggagaaagtccattgctacacc
ctgtccatcaaggagtatcccaaagtagagttggacacccatggctgtgcgctgcgctgc
tcctccctgacagatccctcccaggactcccagttcatcgtggctggggatgaatgcgtc
tacctgtaccagcctgatgaacgagggccctgctttgccttcgatggacacaaactgttg
gctcactggcaccgcggatatctgtttttacttatcagggacgcaaagtcacccaacaag
acagagtttggtagcagggagaactctccgtcagacaaacagcttctgaccatctatgac
ctggacaacaagttcatcgcctacagtgcctcttttgatgatgtcattgatgtggtggca
gagtggggctccttctacatcctgaccagagatggaaaaatgtttgttcttcaggagaaa
gacacacagaccaaactggagatgctgtttaagaagaacctgtttgtgatggccataaac
ctggcgaagagccagcaccttgacagtgacggcctgtcagagatcttcagacagtacggt
gatcacctttacctgaagggagaccatgacggtgccatccagcagtacattcgcaccatt
gggaaactggagccatcgtacgtgatcaggaaattcttggacgcgcagaggatccataac
ctgacggcatatctgcaagccctgcacaggcagtccctggccaacgcagaccacaccaca
ctgctgctcaactgctacaccaagctgaaggacagctccaagctggaggagttcattaag
agcagtgaaagtgaggtccactttgacgttgagatcgccatcaaggttcttcggcaggcc
gcctaccacagccatgctgttttcttggctgagaaacacatgcaccatgaatggtacctg
aagatccagctggaagacctcaagaactatcaggaagggctgcgttacattggacgtctg
cctttcgaacaagctgagagcaacatgaagcgttacggaaaaacactgatgcaccatgta
cctgaaggtaccacgctgctcctgaagggtttatgcaccaactaccaacccagtggagac
acagctgagaaagacagtctgggtaggggtctggtcaacaaggccaactccgaggaattc
atcccaatttttgccaacaacccccgcgagctgaaagccttcctggagcacatgatcgag
gtggagccccgttctccccagggtgtgtacgacacactgctggagctccggctacaagac
tgggcacacgaacaggaccctgtgagaaaaaaggtcctgcagggggaagctgtgtcactg
ttgaggagcgacaacactgtgtttgataaggccctggtcctctgccagatgcacaacttc
aaagaaggcgtcctctacctttatgagaagggtaaactgtaccagcagattatgcactac
cacatgcagaatgaggagtatggaaaagtggtagaggcctgcaagcgctatggggatcag
gagggttgcctttgggagcaggcgttgggatactttgccagaaaagaagaggactgcaag
acctacatcagtgaggtcctacatcacattgaccaaaacaacctgatgcctccattactt
gtggtgcaaacactggcacacaactcgacagccactctctccgtcatcaaggactacctc
atcaataagctgcagagggagagccagcagatagaggacgacgaacgcaaaattcgccag
taccgtgaagaaacggctcacctccgctctgagatccaggagctcaaaacgagtgctaag
atattccagaagaccaagtgtaacatgtgcaacagccccctggagctgccgtctgttcat
ttcctgtgcagccactccttccaccaacactgctttgaaagctacgccgagagtgaggcg
gagtgcccgacctgcactcccgagaaccgtaaggtcatggacatgctgcgtgcccaggac
cagaaacgtgacctgcatgaccacttcaacagacagttacgcagctctaatgatggtttc
tctgtcgtggctgactattttggtcgaggagtgtttaacaagctgactctggtcaccgac
ccacctggcagcaaaaccgttgggaatctggaagtcaacctgcagagagaccttctcatc
cacaccaagagaaactgttaa

DBGET integrated database retrieval system