Sander lucioperca (pikeperch): 116058221
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Entry
116058221 CDS
T07345
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04140
Autophagy - animal
sluc04148
Efferocytosis
sluc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116058221 (vps11)
04148 Efferocytosis
116058221 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116058221 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116058221 (vps11)
Membrane trafficking [BR:
sluc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116058221 (vps11)
Hops complex
116058221 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
zf-RING_5
Beta-prop_EML_2
ADIP
TPR_GEMI5
zf-ANAPC11
ToxA_N
zf-RING-like
Beta-prop_RSE1_2nd
Kbp-5
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
116058221
NCBI-ProteinID:
XP_031166826
Ensembl:
ENSSLUG00000022873
UniProt:
A0A8D0A8T6
LinkDB
All DBs
Position
13:798980..815188
Genome browser
AA seq
926 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPVDNGKNFVFPSGVSACDSGRGHIVLGDMDGKIWLLTRSL
QLTSFQAYKLRVTHLYQLKQHSILVSVGQDEQGINPLVKVWNLEKRDSGNPLCTRIFPAI
PGSKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QVAKVTHLFVATLEKVHCYTLSIKEYPKVELDTHGCALRCSSLTDPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLAHWHRGYLFLLIRDAKSPNKTEFGSRENSPSDKQLLTIYD
LDNKFIAYSASFDDVIDVVAEWGSFYILTRDGKMFVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
AYHSHAVFLAEKHMHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTLLLKGLCTNYQPSGDTAEKDSLGRGLVNKANSEEFIPIFANNPRELKAFLEHMIE
VEPRSPQGVYDTLLELRLQDWAHEQDPVRKKVLQGEAVSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDQEGCLWEQALGYFARKEEDCK
TYISEVLHHIDQNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKIRQ
YREETAHLRSEIQELKTSAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGNLEVNLQRDLLIHTKRNC
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagaaaatttgttttctttgacaaagacacggtgaaggat
cctgtggataatgggaaaaactttgtttttccaagcggagtatcggcttgtgactccggc
cggggtcatattgttctgggagatatggatggcaaaatctggcttttgacgcgctccctg
cagttgacatcttttcaggcctacaagttgcgggtaactcatctctaccagctgaagcag
cacagcatccttgtgtcagtggggcaggatgaacagggaataaaccctctagtaaaggtc
tggaaccttgaaaagagagacagtggaaatcctctgtgcactaggattttccctgcaatt
cctggcagcaaaccgactgaagtgtcttgcctcagtgtacacgaaaacctcaacttcatg
gctattggcttcacagatggcagtgtggttttgaccaaaggtgacatcaccagagatcga
cacagtaaaactctgactctgcacgagggaaccagcccagtcacaggccttgctttccgc
caagtggcaaaggtcacacatctgtttgttgccactctggagaaagtccattgctacacc
ctgtccatcaaggagtatcccaaagtagagttggacacccatggctgtgcgctgcgctgc
tcctccctgacagatccctcccaggactcccagttcatcgtggctggggatgaatgcgtc
tacctgtaccagcctgatgaacgagggccctgctttgccttcgatggacacaaactgttg
gctcactggcaccgcggatatctgtttttacttatcagggacgcaaagtcacccaacaag
acagagtttggtagcagggagaactctccgtcagacaaacagcttctgaccatctatgac
ctggacaacaagttcatcgcctacagtgcctcttttgatgatgtcattgatgtggtggca
gagtggggctccttctacatcctgaccagagatggaaaaatgtttgttcttcaggagaaa
gacacacagaccaaactggagatgctgtttaagaagaacctgtttgtgatggccataaac
ctggcgaagagccagcaccttgacagtgacggcctgtcagagatcttcagacagtacggt
gatcacctttacctgaagggagaccatgacggtgccatccagcagtacattcgcaccatt
gggaaactggagccatcgtacgtgatcaggaaattcttggacgcgcagaggatccataac
ctgacggcatatctgcaagccctgcacaggcagtccctggccaacgcagaccacaccaca
ctgctgctcaactgctacaccaagctgaaggacagctccaagctggaggagttcattaag
agcagtgaaagtgaggtccactttgacgttgagatcgccatcaaggttcttcggcaggcc
gcctaccacagccatgctgttttcttggctgagaaacacatgcaccatgaatggtacctg
aagatccagctggaagacctcaagaactatcaggaagggctgcgttacattggacgtctg
cctttcgaacaagctgagagcaacatgaagcgttacggaaaaacactgatgcaccatgta
cctgaaggtaccacgctgctcctgaagggtttatgcaccaactaccaacccagtggagac
acagctgagaaagacagtctgggtaggggtctggtcaacaaggccaactccgaggaattc
atcccaatttttgccaacaacccccgcgagctgaaagccttcctggagcacatgatcgag
gtggagccccgttctccccagggtgtgtacgacacactgctggagctccggctacaagac
tgggcacacgaacaggaccctgtgagaaaaaaggtcctgcagggggaagctgtgtcactg
ttgaggagcgacaacactgtgtttgataaggccctggtcctctgccagatgcacaacttc
aaagaaggcgtcctctacctttatgagaagggtaaactgtaccagcagattatgcactac
cacatgcagaatgaggagtatggaaaagtggtagaggcctgcaagcgctatggggatcag
gagggttgcctttgggagcaggcgttgggatactttgccagaaaagaagaggactgcaag
acctacatcagtgaggtcctacatcacattgaccaaaacaacctgatgcctccattactt
gtggtgcaaacactggcacacaactcgacagccactctctccgtcatcaaggactacctc
atcaataagctgcagagggagagccagcagatagaggacgacgaacgcaaaattcgccag
taccgtgaagaaacggctcacctccgctctgagatccaggagctcaaaacgagtgctaag
atattccagaagaccaagtgtaacatgtgcaacagccccctggagctgccgtctgttcat
ttcctgtgcagccactccttccaccaacactgctttgaaagctacgccgagagtgaggcg
gagtgcccgacctgcactcccgagaaccgtaaggtcatggacatgctgcgtgcccaggac
cagaaacgtgacctgcatgaccacttcaacagacagttacgcagctctaatgatggtttc
tctgtcgtggctgactattttggtcgaggagtgtttaacaagctgactctggtcaccgac
ccacctggcagcaaaaccgttgggaatctggaagtcaacctgcagagagaccttctcatc
cacaccaagagaaactgttaa
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