Sander lucioperca (pikeperch): 116058224
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Entry
116058224 CDS
T07345
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04517
IgSF CAM signaling
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116058224 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116058224 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116058224 (sptbn4a)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116058224 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
116058224 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
116058224
NCBI-ProteinID:
XP_031166832
Ensembl:
ENSSLUG00000011373
LinkDB
All DBs
Position
13:complement(3554604..3595051)
Genome browser
AA seq
1564 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGLELIQEKPELRSVVQQK
LEEIRECWCDLESTTKAKARQLFENNKPEPAVKSYSDLDHQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDMGELGSLQGVCLPHRGMMAGDRVGGDTEAGEQSGVVETR
IVRLIEPLKERRRILLASKEMHQVAQDLEDEMMWIQERLPLASCKDYGNNLQGVQQHVKK
NQTLQRELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLETERRCVM
LDATLQAQQYYSEAAKVESWLSGQKLHLVNEEKGTDEASTLQLLKAHLALEQTVETYAET
VGMLSQQCQRLRELGHPERCGLTHRLTCTHKAAHIAQEKSEQITKQQSHIDRLYVSLKDM
VEHRKTKLEQQYWLYQLNKDVEELEKWITERETVASSTDLGQDLEDVTVLQERFTKFASE
TNSIGQQRMEQVNKMVNEMIDCGHSDAATIAEWKDGLNESWADLLELMETRRQMLAASHQ
LHKFFTDCKEVLAQIAGKMKQLPEVRACQANITNPATLQRLMHSFEHALQLLVAQVRQLQ
ENAAQLRTIYAGEKAEAIMVKEQEVMDAWKELLSSCEASRVQVTSVTDKVQFFSVVRENL
MWMEGIMGQIGWDEPRDLTALEVMMKQHQDLKAKVDGRSKTIQQCADLGKILIAAGNPAS
EEIKEKLDSLLAKQRDLAEKWDRHQERLQRKQEHFQFAQETVKAEAWLKAKEPLITSKEP
EGGGAQLQTDEVEQLILRHEAFRKAAVTWKERFSSLRQLSAAEKKKEEEKKTTPLSSRRM
FPLSCLTPSVPATSATSSFLRQTVQAHIEPKPLQTRLDLGATPSTQRLSSTLASYKPVIN
GSGYQGLEQHCSGKLVSSSYLGMNHQAAGGGSDSGFSALTSQSGGADTSTYLGINHQTAS
SAESSGYFGLTTGCVGGTQNHLGSGRLGSSGNIAQQPSSGGMGSPGFLPQQNMGSSGYLG
HQPNLGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLAQQPNMGSTGYLAQQPNMGSSGYLA
QQPNVVSSGYLAQNYQSSGGLGSSGFLAQNHYSSGSLGSSGYLVQSGGIMDPKMAYAWQH
LKADFMQPRINHIHKAVNPLLEASRVQREQFGDIPMADMVGPESGLELLHGRLQRDPRGS
RSDPQMDHLRREREYKLGRQTSSEQEIQARLNELPLIVRQERYRRRLERQSSSEQEGSSK
QRLQRQDSSDLEGSVKEGSDKRSGEKRSTMAEIVEQVQEREAANARGEPYRPGSSLSAPV
TRFDGRPRARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHTAQNEGFLYRKKA
TTSDLEAQQRSPNSKSWVNVYCVLKEGQLTFYKDARNHATTYNEEPPVDLSNCTFDPSMG
YKKKKNVFILQINDGINFAFHAKDEEDLKAWTSNITTCIAEHEAMGTWDKPGTSSMDPDH
SERKEKSEGDADARSERSELAEGEERSEKERSEKGDGSEKLDTSEIADKMEGGAGGSSTS
GKSK
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggcccgagacacagcgcgggatgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcggaactggcccgcaataaagaatggcttgccaagatagaa
caggagggtctggagctgatccaggagaagccggagctgcgttcagtcgttcagcagaag
ctggaggagatcagagagtgctggtgcgacctggagagcaccaccaaggccaaggcgcgc
cagctctttgaaaacaacaagcctgagccggcggtgaagagctactcggacctggaccac
cagctctcccacctagagcagcagcccccccagctggagcaggcacaccatctgcccacc
ttcaatgagcaactccagaaattccaggctatggagtctcagataggggacttttacaag
gatatgggagagctggggagcttgcagggggtctgcctaccccatcgagggatgatggca
ggtgacagagtgggcggtgacacggaggccggcgagcagtcaggcgtggtagagacccgc
atcgtccgcctcattgagcccctgaaggagagacgccgcatcctgctggcttccaaagag
atgcatcaagtcgcccaggacctggaggatgagatgatgtggattcaggagcggcttccc
ttggcctcctgtaaggattatgggaataacctccagggtgtacagcagcatgtaaaaaag
aaccagactctccaaagggagctgacggggcggcgcgcccgcgtggaggaggttctggac
cgggcggggatcatcgcttcgctgaggactcctgaggtggagtttgtacgtgaaggggcg
gggcatgtgcgccagctgtgggaggttttgcagctggagacagagaggaggtgcgtgatg
ctggacgccacgctgcaggctcagcagtactacagcgaggcggccaaagtggagtcctgg
ctgtcgggtcagaagctccatctggtcaatgaagagaaaggcacggacgaagcgagcacc
ctgcagctgctgaaggcccacctggctctggagcaaacggtggaaacatatgcagagaca
gtaggcatgctatcccagcaatgccagcgtctacgagaactcggacacccagaaaggtgt
ggcctgacccaccgtctcacgtgcactcacaaagcagcacatatagcccaagaaaagagt
gagcagatcaccaagcagcagtcccacatagaccggctgtatgtgtctctgaaggacatg
gtggagcacaggaagaccaagctggagcagcagtactggctctatcagctcaacaaggac
gtggaagagttagagaagtggatcactgagcgagagacggtggccagttccactgacctg
ggccaagacctcgaggatgtcacggtgcttcaggagagattcaccaagtttgcctcagaa
accaacagcattggccagcagcgcatggagcaggtgaacaaaatggtgaacgagatgatc
gactgcggccactcggacgcggccaccattgccgagtggaaggatggactgaacgagtcg
tgggccgacctcctggagctgatggagacgcgcaggcagatgctggcagcgtcgcaccag
ctgcacaagttcttcactgactgcaaagaggtcttggctcagatcgcagggaagatgaag
cagctgccagaggtgagggcgtgccaagccaacatcaccaatccagccaccctgcagagg
ctcatgcactcctttgagcatgcccttcaactgctagttgcacaggtgaggcaactgcag
gagaacgctgcccagttgagaaccatctatgctggtgagaaggcggaggccatcatggtc
aaagagcaggaagtgatggacgcctggaaggagctgctgagctcctgtgaggccagtcgc
gtccaggtcacttcagtaacagacaaggtgcagttcttctcagtggtgcgtgaaaacctg
atgtggatggaaggcatcatgggccagataggatgggatgagcccagggatttgacggct
ctggaagtgatgatgaaacaacatcaggatctgaaagccaaagtagacggccgcagcaag
accatacagcagtgtgcagatctgggcaagatccttatagctgcaggcaaccccgcatca
gaggagataaaagagaagctggacagtcttctggctaagcagagggatcttgctgaaaaa
tgggacagacaccaggaaaggttacagcgcaagcaggaacatttccagtttgcccaggag
acggtaaaggcggaagcctggctgaaggccaaggagccgctgatcacctccaaggagcca
gagggaggaggggcccagctgcaaacagacgaggttgagcaactcatccttcgccacgag
gccttccgcaaggctgctgtaacctggaaagaacgcttcagctctctccgccagctttcc
gcagctgagaagaaaaaagaggaggagaaaaagacaaccccactctccagccgaaggatg
ttcccattatcatgtctgactcccagtgttcccgcaacaagtgctacctcatctttcttg
aggcagacggtacaggcacatatagaacccaaacccttacagaccaggctggatctgggt
gccactccttcaacccagaggttgtcctcaactctagccagctacaagccagtaataaat
ggatcaggctaccaaggactggaacagcattgcagtgggaagctggtgagctcctcatac
cttgggatgaaccaccaggcggccggaggtggaagtgattccggtttctcggcgctgacc
tcccagagtggtggagcagacacttctacttaccttgggataaaccatcaaactgctagc
agtgcagagagctctgggtactttggactgactactggttgtgtgggtggtacgcaaaac
catctaggcagtggcaggttaggaagttcaggtaacatagctcagcagccaagcagtgga
ggtatgggaagtcctggctttctgcctcaacaaaatatgggcagttctggatacttggga
catcagcctaatttaggaagtacaggatatttggcacaacagcctaatatgggaagcact
gggtatttggcgcaacagcctaatatggggagcactggttatttggcacaacagcctaat
atggggagcactgggtatttggcacaacagcctaatatggggagctctgggtatttagca
caacagcctaatgtggtgagttctggatacctagcgcagaattatcagagcagtggggga
ttgggtagctcaggctttctggcacaaaatcattacagcagtggaagtctgggcagttct
ggatacctggtgcagagtggtggcatcatggaccctaaaatggcatatgcatggcagcac
ctgaaagctgactttatgcaacccaggatcaaccacatccacaaggctgtaaaccccctt
ctagaggccagcagagtgcagcgggaacagtttggggacatcccaatggcagacatggtg
gggccagagtcagggctggagctcctccacggccgtctgcagagggatccccgtggaagc
cgctctgatcctcagatggaccatctcaggcgagagagggagtacaagctgggtagacag
acctccagcgaacaagagatccaggccaggctgaacgaactgccactgattgtgcgtcag
gagcgctaccggaggcgcctggagaggcagtcgtccagcgaacaggaggggagcagcaag
cagaggctgcagagacaggactcgagtgacctggagggctctgtgaaagaaggatctgac
aaacgctcaggggagaagagatctaccatggcagagattgtagaacaggtccaggagaga
gaggcagcaaatgcacgaggagagccttatcgccctggaagcagcctctcagcacctgtg
actcgttttgacggacgccctcgtgcccgagaccgccccaaaccaaggaggaggccccgt
ccaaaggagcctgaggagacacgacgttctcgctcagctccagctactggtgccccaacg
acacctcagccgccttcacacactgcccaaaacgaaggcttcctctaccgcaaaaaggcc
accacatctgaccttgaagctcagcagagaagcccaaacagcaagtcctgggtgaatgta
tattgtgtgctgaaagagggacagctgaccttctacaaggatgctcggaaccacgccacg
acatacaatgaagagcctcctgtagaccttagtaactgcacattcgatccttcaatggga
tacaagaagaagaagaatgtcttcattcttcaaataaacgatggaatcaactttgcattc
catgcaaaagatgaggaggacctgaaggcttggacttcaaacatcaccacctgtatagct
gagcatgaggccatgggcacgtgggacaagccgggaacctcgtccatggaccccgaccac
tcggagaggaaggagaagtcggagggggacgcagacgccaggtccgagaggtccgaactc
gccgaaggggaggagaggtctgagaaggagaggtcagagaaaggggatggctcggagaag
ttagacacgtccgaaattgccgacaaaatggagggcggggcagggggctccagcacgtct
ggaaagagcaaatga
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integrated database retrieval system
