Sander lucioperca (pikeperch): 116058281
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Entry
116058281 CDS
T07345
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116058281 (rnft1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116058281 (rnft1)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116058281 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-ANAPC11
Prok-RING_4
zf-RING_6
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_16
Sina_RING
Motif
Other DBs
NCBI-GeneID:
116058281
NCBI-ProteinID:
XP_031166907
Ensembl:
ENSSLUG00000000895
UniProt:
A0A8C9WXP4
LinkDB
All DBs
Position
13:5971249..5975603
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AA seq
424 aa
AA seq
DB search
MKLRVQNDRSDSRRALKLRESPTVMQPNSSERGAHAGNGLSLTLQPELTRTPAPAAAAAN
PESNEVRVTMTSNPGECSGGASSRRSRVNSHSHTHSQPHAHNQVPHHSNTEPELDPPDSD
LDSGEPSSSMSELRCLFRWLQKSLPFIVLLCAKLVIQHALGLAVGVGLFTTFLYVNKNLQ
SQVFLQDRQSKLQCVWLLLFLISSTLLLYYTFLTETLHHCLIFLSPSIEPLGFWEVLWVV
GITNFIIKFLFMGIKCLILLLPSSLVTYRTQGRWVMLTEELGQVHQATAPVPLWFRYLVT
YEEVDGIPGLTLGVLLALLYLILKLLGLYGQWTSFMKTVRIFVKGEHTGTAATRSQCSEA
GDICPICQGEYREPRVLLCQHIFCDECIALWFNREKSCPLCRTVITEKVYKWRDGATSSH
LQIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgggtgcagaatgacaggagtgattccagaagagcactgaaactgagggag
tctcctactgtaatgcagcctaattcaagtgagcggggtgctcatgcaggaaatggttta
tcccttactctgcaaccagagcttaccaggacaccagcccctgctgctgctgctgctaac
cctgagagcaacgaggtgcgggtaaccatgaccagcaatcctggggagtgcagtggaggc
gcatcatccaggaggtccagagtcaattcccacagccacactcattctcagccacatgca
cataatcaggtgccgcaccactcgaatacggagcctgagcttgacccgcctgactctgat
ctggactctggagaacccagcagctctatgtctgagcttcgctgtctcttccgctggctc
cagaagagtcttcctttcattgtcctactgtgtgctaaactggtcatccaacatgctctg
ggtcttgcagttggggttggcctcttcacaacatttctatatgtgaataaaaatcttcaa
agtcaagtgtttcttcaggatcgtcagtcaaagctgcagtgtgtttggctgctactgttc
cttatctcttccaccctgctgctttactacacctttctcactgagacacttcaccattgc
ctcatcttcctcagcccaagcattgagccgctgggtttctgggaggttctgtgggttgtc
ggcatcaccaacttcataataaagtttctctttatggggattaagtgccttattctgctg
ctgccatcgtcactggtgacctacagaacccagggacgttgggtgatgctgacggaggag
ctgggtcaggtacaccaggccacggctcctgttccactgtggttccgctacctggtcaca
tacgaggaggtggacggcatccccggactcacactgggggtcctgctggctctgctctac
ctcatactaaagcttttaggattgtacggacagtggacgtctttcatgaaaactgtgagg
atatttgtaaaaggcgagcatacaggcacagcagccactaggagtcagtgcagcgaggct
ggagacatctgtcccatctgtcagggagagtacagggagcctcgggtcctactctgtcag
cacatattctgtgatgaatgcatcgctctgtggtttaaccgcgagaagagctgccctcta
tgtcgcaccgtgatcacagagaaggtttacaaatggagggatggagccacatcgtcacac
ttgcagatttattga
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