Sander lucioperca (pikeperch): 116058756
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Entry
116058756 CDS
T07345
Symbol
rad23ab
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03420
Nucleotide excision repair
sluc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116058756 (rad23ab)
09124 Replication and repair
03420 Nucleotide excision repair
116058756 (rad23ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sluc03051
]
116058756 (rad23ab)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116058756 (rad23ab)
Proteasome [BR:
sluc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
116058756 (rad23ab)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
116058756 (rad23ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Ubiquitin_2
Dsc3_N
CUE
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
116058756
NCBI-ProteinID:
XP_031167463
Ensembl:
ENSSLUG00000000882
LinkDB
All DBs
Position
11:30168002..30187323
Genome browser
AA seq
496 aa
AA seq
DB search
MLTITLKTLQQQTFKIEIDPELTVKALKEKIEKDRGKDAFPAAGQKLIYAGKILNDDTQL
NEYKIDEKNFVVVMVTKPKPAPTPQAAPQPTAQPAVAPAPAPAPSSASGPAPASGTTQEP
STPKHTASAPTPTPQSVPRSEPPPPAQENTPLASVEATAAPDSNTAPGSAPASASAATPA
SAPAPAPAPKVVQTAPASASASAPADCPTATPDPPQPEEKLSEDPENEPAATEEVLSIAS
SLVDELGLLEEAASILVTGPAYENLVSEIMCMGYEREQVVAALRASYNNPDRAVEYLLMG
IPAEASDLPPPEPVRHSAPAIPPTPATQEPLQPPAALNTGLVSGSQPSPARGGPVSTENP
LEFLRNQPQFQQMRQIIQQNPALLPALLQQLGRDNPQLLQVPHQHTHRATQITQHQERFV
QMLNEPRSGETEGDGAEAQGSPQTNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKN
ENLAANFLLQQTWDDE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgataacactgaagacccttcaacagcagacgttcaaaatagaaatagatcca
gaattgacggtcaaagccctgaaggagaaaatagagaaggacagaggaaaagatgcattt
cctgctgcaggacaaaaactcatctatgcaggcaaaatcttgaacgatgacacccagctg
aacgagtacaaaatcgatgagaaaaactttgtggtggtcatggttaccaagcctaaacca
gcccctactccacaagcagcacctcagccaacagcccaaccagctgtggctccagcacca
gcaccagcaccatcctctgcttcaggcccagcacccgcctctggcacaacacaagagccc
tccacaccgaagcatacagcgtctgcacccacacctaccccacagtcggtgcctcgctct
gaacccccgcccccagcgcaggaaaacacccccctggcttctgttgaagcaacagcagct
ccggactcaaacacagccccgggctcagctccagcctctgcttcagctgctactccagcc
tcggccccagctccagctccagctcccaaagttgtccagacagccccggcctcggcgtca
gcctcggcccctgcagactgccccaccgccacaccagaccctccccagccagaagaaaag
ctaagcgaagacccggagaatgagccagctgccactgaagaagtcctatccattgcttca
agcctcgttgatgaactgggtctccttgaagaagcagcgtcaatactggtgacaggtcca
gcctatgagaacctggtgtcagagattatgtgcatgggttatgagcgagagcaggtagtt
gctgcactccgagccagttacaacaacccggaccgagcagtggagtatctactcatgggt
attccagcagaggccagtgatctgccacctccggagccagttagacacagtgctccagcc
atcccgcccacccctgctacacaagaaccactgcagcccccagcagcgttaaacacaggg
ctggtgtctggcagccagccttcccctgctcggggaggccccgtctccacagagaaccct
ctggagttcctgaggaaccagcctcagttccagcagatgagacagatcatccagcagaac
ccggccctcctaccagcccttctgcagcagctaggcagagacaacccgcagctgctgcag
gtaccacaccagcacactcaccgcgctacacaaatcacgcagcaccaggagcgttttgtg
cagatgctgaatgagccacgaagcggagagacggagggggacggggccgaggctcagggg
tcaccacaaaccaactacatccaggtcaccccgcaggaaaaggaggccattgagaggtta
aaagcgctgggctttccggaaggcttagtcatccaggcttacttcgcctgcgagaagaac
gagaatctagctgccaacttcctgctacagcagacgtgggacgacgagtaa
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