Sander lucioperca (pikeperch): 116058814
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Entry
116058814 CDS
T07345
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04144
Endocytosis
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116058814 (pdgfra)
04020 Calcium signaling pathway
116058814 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116058814 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116058814 (pdgfra)
04540 Gap junction
116058814 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116058814 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sluc01001
]
116058814 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sluc04090
]
116058814 (pdgfra)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116058814 (pdgfra)
Protein kinases [BR:
sluc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116058814 (pdgfra)
CD molecules [BR:
sluc04090
]
Proteins
116058814 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
116058814
NCBI-ProteinID:
XP_031167585
Ensembl:
ENSSLUG00000016392
UniProt:
A0A8C9ZF31
LinkDB
All DBs
Position
11:26250087..26271664
Genome browser
AA seq
1467 aa
AA seq
DB search
MDGVKTYVVFGGILVVLVSVTFGLLPPTIVSNEEEFTLQPNSVFNISCTGKRNVVWAEPL
PKNTFVYPGYYTATLFIYNATVENTGYYMCTYESPEGDLEVEPEEDNEAGIYVFVPDPQA
PFVPETPDNLVVPMDTPGVLISCRVSDPYSHVILRSVPSGEDMPAYYDNKMGFFGSLLPG
QYQCETIVNGQTMRSAIYTVETEAPLDTEDFDVEVKASGETVRAGQPLNITCVAPPGLGF
QQQWLHPKKQAVDAVQMKQTFPDRVIYILSIQQATSQDSGTYECSVTQHISGEVRVSSVA
VTVFEENSFVALDHSGIQATEFVSLLEETEFTILIDAYPAPKVTWLKDGTAMPQNYYILT
KTSHLEGNRYQSILTLRQPLEKDNGNYTITALSGSSTAQFSFTLKVKATTAMMFPPSSAP
VLLPEVEEMVVPLHTPFTLTCRGEAKLAWQTPLDVHEQTQEDNSGLFVTTITVDSATAMH
TGYYACSYSHNTTEDIDDSSIYIYVPDPDVLFVPSLVPFGNHVLSDHEEMEIQCRVSDPS
ANVTLVNVDTQQPVPSVYDSKRGALGVFTAGTYICKALINGEEHYSGEYIVHGWTGGAAL
HVELTAKRTALLVGDTITVTCLARGSEILEDHWKYPGKLANRAIKTVHENKRAQEILYTL
TIPQASTKDSGIYSCSITDIISNEDQTKEIAVQVFATAFMSVWPEFGEYESAELDEVREF
RAKISSFPRAHVTWLKDGIPLGDVTAEISSSLRQLSETSYMSVLTLIRAKEEDSGNYTMR
VENGDQIRDVGLNLEVKVPAVIVDLMDIHHGSATGQSVVCITRGQPTPVVEWFICKDIKH
CANDSSAWVPLPANSTEVTMDSHIDEESNLESQVMFGHLESTLAVRCLARNEMAVVSREV
KLVSNGPHPELTVAAAVLVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIY
VDPMQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR
SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENFL
SLTPEKSKKELDIFGINPADESSRSYVILSFESKGDYMDMKQADTQYVPMLEMSNPHKYS
DIQRSNYDHPPSQKEDEMDVLLSDNMNEGLTTTDLLSFTYQVAKGMEFLASKNCVHRDLA
ARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNMYTSLSDVWS
YGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPQDLYEMMMKCWNSEPEKR
PTFLGLSETVSSLLPSSYKRHYERVNHEFLKSDHPAVTRVCVENDDAYIGITYKNQGKLK
DRESGFDEQRLSSDSGYIIPLPDLDPVSDDEYGKRNRHGSQTSEESAIETGSSSSTFAKR
EGETLEDITLLDEMCLDCSDLGEDSFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtaaagacgtatgttgtctttgggggtatcctggtggtgctggtttcagtt
acctttggactgttgccgcctaccattgtgtccaatgaagaagagttcaccctgcagccc
aattccgtgttcaacattagctgtaccggtaaaagaaacgtcgtttgggctgaacccctg
ccgaaaaacaccttcgtgtacccaggatactacacggcgacgcttttcatttacaacgca
actgtagaaaacaccggctattacatgtgtacctatgaaagcccggagggtgacctggag
gttgaaccggaggaagacaatgaggcgggaatatatgtctttgtcccagatccccaggct
ccatttgtcccagagacccctgacaacttggtagtccccatggacacacctggggtcctc
atctcctgccgtgtgtctgacccctactcccacgtcatcctgaggagtgtccccagtgga
gaggatatgcctgcctactacgacaacaagatgggcttcttcggaagcctcttgcccggg
cagtaccagtgtgaaaccatagtgaacggccagaccatgagaagtgccatttatactgtg
gagactgaggcccctttggacacagaggattttgacgtggaagtaaaagccagtggggag
acggtgagagcagggcagcctttgaatatcacgtgtgttgctccgcctggactgggcttt
cagcagcagtggctccatcctaaaaaacaggctgtggatgcagttcagatgaaacagact
tttcctgaccgggtcatctacatccttagtatccaacaagccacctctcaggacagcggc
acctacgagtgctccgtcacccagcatatcagcggagaggtccgagtcagcagcgtggct
gtcactgtctttgaggagaattcctttgtggcactggatcacagcgggattcaagctacg
gagtttgtcagccttttagaggagacagagtttaccatcctcattgatgcctacccggcc
cccaaagtgacctggctgaaagacggcacagccatgccacagaactactacatcctcact
aaaactagccacctcgaagggaatcggtatcaaagcattctgacattacggcagcctctg
gagaaagacaacgggaattataccatcacggccctcagtggctctagcacggctcagttc
tcctttaccctcaaagtgaaagccaccaccgccatgatgttcccaccatcctcagcccct
gtgctgctgcccgaggtagaggagatggtggtgcccctccacactcctttcaccttgacc
tgtcggggagaggcaaagctagcctggcagacaccgctggatgtgcacgagcaaacacag
gaggacaacagcggcctgtttgtcaccaccatcaccgtggacagcgccactgcaatgcac
accggctactacgcatgctcctacagccataataccactgaggatatagatgacagcagc
atctacatctatgtgccagacccagatgttctctttgtgccatcactggtgccttttggc
aaccacgtcctgtccgaccacgaggagatggagatccagtgtcgagtgtctgatcccagt
gcaaacgtgaccctggttaacgtcgacacccagcagccggtgcccagtgtttatgacagc
aagaggggcgctttgggagtattcaccgctggaacctacatctgtaaggctctcataaac
ggagaggaacactacagcggggaatacatcgtccatggctggacaggtggcgctgcgctg
catgttgagctgacagccaaacggacggctctgctggtgggagacaccatcacggtcacc
tgtctggcacggggatctgagatcctggaagaccactggaaataccctggcaaactggct
aatcgtgctatcaaaacagtgcatgagaacaagagggctcaggagatcctttacaccctg
acgatcccacaggcctcgaccaaagacagcggcatctactcttgctccatcactgatatt
attagtaatgaagaccagacaaaggagatagctgttcaagtatttgcaactgcgtttatg
tctgtctggccggagttcggagaatatgaatcggcagagctggacgaggtccgggagttc
agagccaaaatcagctccttccccagagctcatgtcacttggctcaaagacggcatcccg
ctcggcgacgtgacggcggagatctcctccagcctccggcagctcagcgagaccagctac
atgagtgttcttaccctgatccgggccaaggaggaggacagcgggaactacaccatgcga
gtggagaatggagaccaaattcgtgacgttggattaaacctggaagtcaaagtgcctgca
gtcattgtggacctgatggacatccaccatggctcagccacaggccagtctgtggtgtgc
attaccagagggcagcccactcctgtggtggagtggttcatctgcaaggacatcaaacat
tgtgccaacgactcgtctgcctgggtgcccctcccggccaactccacagaggtcacaatg
gactcgcacatcgacgaggaaagtaacctggagagccaggtcatgtttggtcatctggaa
agcacactggcggtgcgctgcctggccaggaacgaaatggccgtcgttagcagggaggtc
aaactggtgtccaatggccctcacccagagctgactgtagctgctgctgtgctggtgctc
ctggtcattgtcatcatctcactcattgtcttggttattatctggaaacagaaaccacgg
tatgagatccgctggagggtcatagagtctgtgagcccagacggccatgagtatatctat
gtggatcccatgcagcttccctacgactccagatgggagttcccccgtgacagacttgtg
ctcggtcgtatcctgggctctggagcctttgggaaggtggtagaaggcactgcctacgga
ctcagccgctcccaacctgtcatgaaggtggcagtgaagatgctgaaaccgacggcacgc
tccagcgagaaacaggctctgatgtctgaactgaagatcatgactcatcttggaccacat
ctcaacatcgttaacctcctgggagcatgcaccaagtcaggcccgatctacattatcaca
gagtactgcttctacggggacctggtcaactacctgcacaagaacagggagaacttcctc
agcctgaccccagagaaaagtaaaaaagagctggatatctttggaatcaaccctgcagac
gagagcagcaggagttatgtgatcctgtccttcgagagcaaaggagactacatggatatg
aagcaggctgacactcagtatgtgcccatgctggagatgagcaacccccataagtactcg
gacatccagaggtctaactatgaccacccaccctctcagaaagaggacgagatggacgtc
ctgctgtcagacaacatgaacgagggcctcaccaccaccgatctgctcagttttacctac
caggtggccaaaggcatggagtttctggcttccaaaaattgtgtgcatcgggacctcgct
gccaggaatgtcctcctctctcagggcaagatagtgaagatctgtgacttcggactggcc
cgagacatcatgcacgacaacaactatgtctccaaagggagcactttcctgccagtgaag
tggatggcgccagagagtattttcgacaacatgtacacctctctcagtgatgtttggtcc
tacggcatcctgctctgggagattttctccttaggtggtaccccatacccaggcatggtc
gtggattcaagcttctacaacaagatcaagagtggatacaggatgtccaaaccggagcat
gcaccccaggacctgtatgagatgatgatgaaatgctggaacagcgagcccgagaagagg
cctactttcctgggtctgagtgaaactgtgtcttctttgctgccctccagctacaagagg
cattatgagagggtgaaccatgagttcctaaagagcgaccaccccgctgtgactcgagtg
tgcgtggagaacgacgacgcctacatcggcatcacctacaagaaccagggcaagctgaag
gaccgggagagcggcttcgacgagcagcggctgagctccgatagcggctacatcatcccc
ctccccgacctggaccctgtatctgacgacgaatatggaaagaggaacagacacggctct
cagacgtccgaggagagcgccatcgagacgggctctagcagctccacttttgcgaagcgc
gagggcgagactctggaggacatcacgctgctggacgagatgtgtctagactgtagtgac
ctgggggaggacagcttcctgtga
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integrated database retrieval system
