Sander lucioperca (pikeperch): 116058883
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Entry
116058883 CDS
T07345
Symbol
dsg2.1
Name
(RefSeq) desmoglein-2.1
KO
K07597
desmoglein 2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04382
Cornified envelope formation
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116058883 (dsg2.1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116058883 (dsg2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116058883 (dsg2.1)
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Major cadherins
116058883 (dsg2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Fibulin_C
DUF6906
Motif
Other DBs
NCBI-GeneID:
116058883
NCBI-ProteinID:
XP_031167695
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All DBs
Position
11:complement(28566287..28583374)
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AA seq
1158 aa
AA seq
DB search
MTRVSPAALCVWLLFVLQAVAVVKAHWIPPPKPLRENVDYTKLEYVAKIHSDFDDGNGNI
EYSLEGSGASNSPYHVFVVDRRSGNIRVTQVLDREFIDSYNLSGVARYKDGSLAEENVDI
RFKVEDDNDKSPVFQDIQTGAVNECSSVGTSVMRVIATDDDEPGNVNSQITYYMIDQTPA
HDMFKIDTDGTIRVKKSSLDREKTDKYVLTVRGQDLNGQPEGNIGTGTVTINILDVNDNV
PTLEKTEYQGSIEENTKDVEVMRVKTQDLDLKYTDNWEAVFDIVQGNEAGYFSIKTDPVT
NEGVLMLVKAVNYEDVKDLNLGIIVKNKAPMFDGSAGGSAAGIGFGGGGGGGGGAGGGGG
AGGGGGAGGTSGGGGSGGSSWQGGTTFKTYPIKINVMNQPEGPAFDPKIKKIPVSEGGTS
FNMNDVIGQYQAIDGDTGKPAEKVRYAKGLDPDNWLVIDPLTAEIKLNKKPDRESPHLVN
GTYTAEIVCITEDMPAKTATGTIAIQVGDVNDNCPILTTNIHTMCTTDDSVIVNAEDKDS
YPNGPPFDFVIIPEGTQGKWQVNQLNDTAASLTAQESMWPGFYEVKFVVRDKQGEACPDP
QKVTVQVCTCGDGMVCGKRSISKGSEFGPAGIGLLFLGLLVLLLLLLLLLFCQCGGAGGL
PGGFTEMPFDTKSHLINYRTEGQGENTEVPLLNMPTQMDGNMVNVNMGMTNNTSAMPLMA
GLDFQRSVTSMNEMNGPGCQGGFASGPREGAWGMMNQLSGSGFYSEFEGRESGVGGGMYD
GMALPDHFLAQYYTQKVASGNDNLGGKDCLLVYDYEGQGSLAGSVGCCSLLESDNDLHFL
DDIGPKFKTLAEVCGEKKIPTEVKQEFTPRPSASVNTQSSVSSLMTAQQLPPPPQPMPRI
PKAVVSETVKKSTATVREGKTTVTEGMTTVKEGMATQGQMLLLQQPAQQPVYYTTAPVMQ
PMHYVVQPQVQNTVLLAEAPATNMQSMVLLNGTQTGPAQGMVFQNQTMMTRGQAQGPHMM
LVERSGVQGSGANMIHAGNLSGSQTMMVMEGMVPAGSMKGGGSQTFLMQGGTLQQPGGHS
GSQRVLLVGGPTSSAGQLVQEAGGLSQKSDISGSQRVLYSKVSTSAGPQTSVAGSSTTKV
SGTPTYRKVVVQEKTTEL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactcgggtttctccagccgccttgtgtgtgtggctgctgtttgtgctgcaggctgtt
gctgtggtgaaggcccactggattcccccaccaaaaccactgagggaaaatgtagactac
accaaattggaatatgttgccaagattcattccgattttgatgatgggaatgggaatatt
gaatactctctagaaggcagtggtgcaagcaacagtccctaccatgtgtttgtagtcgac
cgtagaagtggaaacattcgtgtcacccaagttcttgacagggaattcatcgattcctac
aatctgtcaggtgttgctaggtacaaggatggcagccttgcagaggaaaacgttgacata
cgattcaaggttgaagatgacaacgacaaatctccagtgtttcaagacatccagaccggg
gcagtgaatgagtgcagttctgtagggacttcagttatgagagtaattgccaccgatgat
gatgaaccagggaatgtgaactctcagatcacctattacatgatagatcagacaccagct
catgacatgttcaagattgacaccgatgggaccatccgtgtcaaaaaatctagcctggac
agagagaaaacagataagtacgttctgacggtgagaggtcaagacttaaatggccaacca
gagggaaacataggaaccggcacagttaccattaatatcctggacgtgaatgacaacgtc
cccactctggaaaaaaccgagtatcagggcagcattgaggagaacacaaaggatgtggag
gtgatgagggtcaaaacacaggacctggacctgaagtacacagacaactgggaagctgtg
tttgacattgtccaaggcaacgaggccgggtacttcagcatcaaaacagaccccgtcacc
aacgagggcgtcctaatgctcgtcaaggctgtgaactatgaagatgtgaaggaccttaac
ttaggcataattgtgaagaacaaggctccgatgtttgatggatctgcgggaggttctgca
gctggtataggtttcggagggggaggaggtggaggaggtggggcagggggaggaggtggg
gcagggggaggaggtggggcaggtggaacaagtgggggaggtgggtctggaggatcatca
tggcaaggtgggaccacatttaaaacctatccaatcaaaatcaatgtgatgaaccagccc
gaggggccagcttttgacccaaagatcaaaaagattcccgtgtcagaaggaggcacctcc
ttcaacatgaatgatgtcatcggccagtaccaggcaatagatggagacactgggaaacca
gctgagaaagtcaggtatgccaagggcttagaccctgacaactggctagtcatcgaccct
ttgacagctgagatcaaactgaacaagaagcctgatagagaatctccacacctggtcaat
gggacatatactgcagaaatagtctgcattacagaagacatgcctgctaaaacagccacc
ggtacaatagccatccaggtgggagatgttaatgacaactgccccatcctgaccactaac
atccacactatgtgcaccacggatgattctgtcattgtgaacgctgaagataaagattcc
tacccaaacggacctccttttgactttgtcattatcccagagggcactcagggcaaatgg
caggtgaatcaattaaatgacactgcagcttccctgactgcccaggagtccatgtggcct
ggattctacgaggtgaaatttgtggtgagggacaagcagggagaggcctgtccagaccca
cagaaagtgacggtccaagtctgtacctgtggggacgggatggtgtgtggaaaacgaagc
atcagcaaaggatcagagttcggacctgcaggcatcggactgctgttcctgggtctgctg
gtgttactactacttcttctgttgctgctcttctgccaatgtgggggggctgggggcttg
ccagggggctttactgagatgcctttcgacaccaaatcacacctcattaactaccgcact
gagggccagggagagaacacggaggtgccgctactgaacatgccaacacaaatggatgga
aatatggtcaacgtgaatatgggcatgactaacaatacttcagcaatgccgctcatggca
ggtctggatttccagagatccgttacttccatgaatgagatgaatgggcccggttgtcaa
ggaggttttgcaagtggcccaagagaaggggcatgggggatgatgaaccagctgagcggc
agtggcttctactctgagtttgagggcagagaatcaggagtaggtggaggaatgtatgac
ggcatggctctgccagaccacttcctggcacagtactacactcagaaggtggccagtgga
aatgacaaccttggaggaaaggactgtcttttagtttatgactacgagggccagggctcc
ctggctggctcagtgggctgctgcagcctcctggagtctgacaacgacttgcacttcctc
gatgacatcgggccaaagttcaagaccctggctgaggtgtgcggagaaaagaagatccca
actgaagtcaaacaagaattcactcctcggcccagtgcttccgtcaacactcagtcctca
gtatcaagtttgatgactgcccaacagctgccccctccaccccagccgatgccccgcatc
cctaaggccgtggtcagtgagacagtgaagaaaagcacagccacagttagggaagggaag
actacagtgacggaagggatgactacagtgaaggaagggatggcaactcaaggccagatg
ctcctgctacagcagccggcgcagcagcctgtctactacaccaccgcccctgtgatgcag
ccaatgcactacgtagtccagccacaggttcagaacacagtgctgctggctgaggcacca
gccaccaacatgcagagcatggtactgcttaacggcacccagactggtccggcccaaggc
atggtttttcagaaccagacaatgatgaccagaggacaagcccagggcccccacatgatg
ctggtggagaggagcggggtccagggaagcggtgccaacatgatccatgctggcaacctc
tctggctcccagaccatgatggtcatggagggcatggtccctgcagggtcaatgaaaggc
ggagggagccagaccttcctcatgcaggggggcactctgcagcagccaggaggacattct
ggatctcagagggtcctgctggtcggggggccaacgagcagcgcaggtcagctggtccag
gaggcaggagggctgtcccagaaaagtgacatctctggctctcaaagagtcctctacagc
aaggtcagcacttcggctggccctcagaccagcgtggcgggttcctctaccactaaagtg
agcggaacccccacctaccgcaaagtggtggtgcaggagaaaaccactgagttgtga
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