Sander lucioperca (pikeperch): 116058908
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Entry
116058908 CDS
T07345
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X2
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116058908 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116058908 (taf4b)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116058908 (taf4b)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116058908 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
116058908 (taf4b)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116058908 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
Motif
Other DBs
NCBI-GeneID:
116058908
NCBI-ProteinID:
XP_031167726
Ensembl:
ENSSLUG00000019036
LinkDB
All DBs
Position
11:complement(29018047..29058002)
Genome browser
AA seq
699 aa
AA seq
DB search
MVCPSFLCATNAALGSGTTLPQNHRQQVQAKCGPIAAVQSPATAAGGSKGDCVSATPPKV
LPTGHGPQPPSCTVAVRQTSSPSVMVVSKVVTPGRATATSQPQVTKAALSQVAHMNQTPT
PGRTVVITVPRAAGAQTVTVAPRLPHAASPQLPANIQIPAGMMLIRSDSGQLMLVSQQAL
AQAQQGQRGVGGQGPRILVPQGSAASGNKSNEKVTVIRMAAPPSFQPAPVQKTAVVKVIG
VHKPAVVPPVSAVSEQGSQHRIQAVVAETKKEPPTAISQATLDSVKKCKNFLVTLIKLAS
SDSRSANMANNVRGLVRSLLEGKLEAEEFTEQLYRELKSTPQPCLVPFLKKSLPAVRRLT
ADPQLFIQQASAHNLSTPSSTMKQSSTDTGQNLSTNQQVIHQQPRGVTVRATSAQSTNHT
YKSSRPPPKPTVVPSGSHFTGTFSMKQPFTQEPPRSTKFAFSSGSYREDDDINDVASMAG
VNLREENAQILTSVVGSVVQSCQDQPFLSPNPVLSRILRTGQALGVTDVAPEVLALVSHA
TQECLRGLLEKLSVMAEHRKPALKEDPWHAKVSDVRSQLRFLEEVESLKKKRKDEEERER
LLRLARSRSHTEDPQQQQLKQRAKEFQQIEAAQLQQREANLTALAAIGPRKKRPLEQSGS
QVTLLPRQRVTRVVLRDLLLCMEQDHFLSHSLTLYKAML
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtccttctttcctgtgtgccacaaatgcagcactgggttcaggcaccacgctg
ccacaaaatcaccgacaacaggtccaagccaaatgtggacccatcgctgctgtgcaatcc
ccagccactgctgcaggaggctcaaagggtgactgtgtgtctgccaccccacctaaagtc
ctccccactggccatggcccccaacctccctcctgtacagttgcagtgcgtcagacttca
tctccttctgtcatggtggtatcaaaggtggtcaccccaggacgagcgactgctaccagc
caaccacaggtaacaaaagcagctttgagccaggtggcccacatgaaccagacccccacc
ccaggacggacagtggtgataactgtacccagggcagcaggtgcacagacagtcactgtg
gcccctcggctgccccacgctgcttccccacagctcccagccaatatccagataccagca
ggtatgatgttgatccgcagtgacagtggccagctgatgcttgtatcccagcaggctttg
gcgcaggctcagcagggacagagaggcgtcggtggtcaaggacctagaatactggtcccg
cagggatcggcagcatctggaaataaaagtaacgagaaggtgacagtgatcaggatggca
gcccctcccagtttccagcccgcaccagtccagaagaccgctgtggtaaaggtgattggt
gttcacaaaccagctgtagtcccgcccgtcagtgctgtgtctgaacaagggagccagcat
cgcattcaggcggtcgtcgcggaaaccaaaaaggaacccccaaccgcaattagtcaggcg
accctggatagtgtgaagaagtgcaagaacttcctggtgactctgatcaagctggcctcc
agtgactccaggtccgccaacatggccaacaacgtccgaggactggtccggagtctgctg
gaagggaagctagaagcggaggagtttacagaacagctgtatcgtgagttgaagtcgact
ccacagccctgcttggtgcctttcctcaagaaaagtcttcctgcagtgcgccgccttact
gcagacccccagttatttatccaacaggcttcagcccacaacctcagcactccgtcttcc
accatgaagcagtccagcactgacacaggacaaaacctcagtaccaaccagcaggttatc
caccagcagcctcgaggagtgactgtgagagcgacatcagcccagtccacaaaccacacg
tataagagcagcagacccccacccaaacccacagtggtcccgtcaggatcacactttacc
ggaactttttcaatgaagcagcctttcactcaggagccacctcgttctaccaaatttgca
ttcagttcaggatcttacagagaagatgatgacattaacgatgtcgcctccatggctgga
gtcaacctgagggaggagaatgcccagatcttgaccagcgtcgttggctctgtggtgcag
tcgtgtcaagaccagcccttcctctcccctaacccagtgctcagccgaatcctccgtaca
ggacaggcattgggagtaacggatgtcgctccagaggtgctagctctggtttctcatgct
acgcaggagtgtctccgtgggctgctggagaagctcagtgtgatggcagaacaccgcaag
ccagccctgaaggaggacccgtggcatgccaaggtgagtgatgtacgctcccagcttcgc
ttcctggaggaagtggagagtttgaaaaagaagaggaaagatgaagaggagagagagaga
ctgctgcgtctggccagaagtcgctcccacactgaggatccacagcagcagcagctcaag
caaagagccaaagagttccaacaaatagaagcagctcagctgcagcagagagaggccaac
ctcacggctctggctgccatcgggcctcgcaagaagagacctctggagcagagtggaagc
caggtgactctgctgcccagacagagagtgactcgggtcgtgctgagggatctgctgctg
tgtatggagcaggaccacttcctgtcccactctctcactctgtacaaagccatgctctga
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integrated database retrieval system
