Sander lucioperca (pikeperch): 116058970
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Entry
116058970 CDS
T07345
Symbol
fip1l1a
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116058970 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116058970 (fip1l1a)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116058970 (fip1l1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
116058970
NCBI-ProteinID:
XP_035862812
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All DBs
Position
11:26066061..26101111
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AA seq
439 aa
AA seq
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MSSSESDSKDFTEDSDEGQIYQFIYDMITRDDKEEEKEEVQIPSSSENTPVHLKTDAEWS
AHAFAVYPDTPFSDGSEDKSTHNTTLTRQKDQEVGNTKGLDTDALDNIPGIPVPKASEEK
PWRKAGANISDYFNFGFDEESWNTYSTKQSKVRKANRKLYTKIMAQKEKGTSPAPPSSGS
PSILASRQPSATNNVNKGQRGSRVERRQSLSDGKNHYQVTTEMSPEEDRFTSYPSSPSNF
NSLFAYIPPPPFLFRSGPLSASPFAALDGGYSKGFDDPSTSGHPCSSGVSSLIPRSMSSK
AGGIDTAKAWECYKRQEKHDKDKDRSRERGRDKDTTRGRNRDRESCSSSYSAEERTRHRD
TTERGHRRLSLRENAQVXHTHTHTHTHTHTGSSSSNSRRASGEDRDSQSRHKHKKAKRNR
TDKKTKMSSADQERKLKRD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcggagtcagactccaaagatttcaccgaagatagcgacgagggacaaata
tatcaatttatttatgacatgatcacaagagatgacaaggaggaggaaaaggaggaggtt
caaatcccatccagctcagagaacacaccggtgcatctgaaaactgatgctgagtggagc
gcacatgcattcgcggtgtaccctgacacaccttttagtgacggctcagaggacaaatca
acacacaacaccaccctcacaagacaaaaggaccaggaagttggtaatacaaagggacta
gacacggatgcattggacaatatcccaggaatcccagtaccaaaggcttcagaggaaaag
ccatggaggaaagctggtgctaacatctccgattactttaactttggtttcgatgaagag
agctggaacacctactctacgaaacagtcgaaagtccgtaaagctaatagaaaactatac
actaaaatcatggcccagaaggaaaaagggacttctcctgctcctccttcgtcaggcagc
ccctctatactagcttccagacagccaagtgctaccaataatgtgaataaaggacaacgg
ggatccagagtagaaaggcgccaaagtctcagtgatggaaaaaaccattatcaggtgact
actgagatgtcccctgaggaggatagatttacttcttatccgtcctctccatcaaacttc
aattctctatttgcatatatccctccaccacctttccttttccgatcaggacccctgtct
gcctccccgtttgctgctttggatggtggatactccaaaggctttgatgacccctcaact
tcagggcacccatgttcatcaggtgtatcatcgttaatcccaaggagtatgtcctcgaaa
gctggagggattgacactgccaaggcctgggaatgctacaaacggcaggaaaagcatgac
aaggacaaagacagatccagagagcgcggccgtgataaagacactactagaggcagaaat
agggacagagagagctgttcatcttcatacagtgcggaggagcgaacgaggcacagggac
actacggagcgagggcacagacgcctcagtttgagggaaaacgcgcaggtctgacacaca
cacacacacacacacacacacacacacacaggcagcagcagcagcaacagcaggagggcc
agtggtgaggacagagacagtcagagtagacacaaacacaagaaggccaaaagaaatagg
acggacaagaagaccaagatgtcctctgctgaccaagagaggaaattaaaacgtgactga
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