Sander lucioperca (pikeperch): 116059331
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Entry
116059331 CDS
T07345
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116059331
03015 mRNA surveillance pathway
116059331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116059331
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116059331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_7
RRM_occluded
RRM_3
RRM_5
RRM_MUD2_C
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
116059331
NCBI-ProteinID:
XP_031168207
Ensembl:
ENSSLUG00000015450
UniProt:
A0A8C9Z438
LinkDB
All DBs
Position
21:complement(9223949..9227102)
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AA seq
319 aa
AA seq
DB search
MSCKCRSGGHVTSATSSSRSDVFSGRKQVVEAKSPRLKNMAPSPTKRKEEEKTKDRGKEK
TSTKEGDKERGREKARKRRSASTGSSSSRSRSSSTSSSSSGSSSGSSSGSSSSGSSHSGS
SSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGDDKERRKRSPSPKPTKVHLGRL
TRNVTKDHIQEIFSTYGKIKMVEMPMDRVHPHLSRGYAYVEFETPEEAQKALKHMDGGQI
DGQEIAASAVLTQRIRPPPRRPSPPRRMPPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSR
SRSPGRRRHRSRSSSNSSR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtaagtgtcgctcaggtggacacgtaacttccgctacttcgtcatcacggagc
gacgttttctcaggccgcaagcaagtggttgaagcgaaatcacctcgtttgaaaaatatg
gcaccatcacccacgaagcggaaggaggaggaaaaaactaaagacagaggcaaagaaaag
actagtacaaaggaaggagacaaggagagagggcgggagaaggcgaggaaacgtcgcagt
gcctctactggcagcagcagcagcaggtccagatctagctctacttcaagcagcagctct
ggttccagctcaggctcctcaagtggatccagctcatccggctccagccactctggttct
tcaagctctcgttcctcctcctcttccagctcctcaggctcccctagccccagccgtaga
cgccatgacaaccgccgccgctcccgctcagcgtccaaaacacagaagaggggagacgat
aaggagcgaaggaaaagaagcccgagccccaaaccaactaaagttcacttagggcggctg
accaggaatgtcaccaaggaccacatccaggagatcttttccacatatggaaaaatcaaa
atggtcgaaatgccaatggacagggtccacccacacctgtccaggggctatgcttatgtg
gagtttgagactcctgaggaggcccagaaggccctcaaacacatggatggaggtcagatt
gatggacaagaaatcgctgcatctgccgtgctgactcaacgaatccgccctccacctcgt
agaccttctccccctcgcagaatgcccccaccaccacctatgtggcgtcgcagtccacca
cgcatgaggagaaggtctcgctccccgaggaggcggtccccagtacgccgccgctctcgc
tccagatctcctggtcgcaggcgtcaccgctctcgttccagctctaactcctccagatag
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