Sander lucioperca (pikeperch): 116059516
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Entry
116059516 CDS
T07345
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
sluc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116059516 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116059516 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116059516 (mgrn1b)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116059516 (mgrn1b)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116059516 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116059516
NCBI-ProteinID:
XP_031168508
Ensembl:
ENSSLUG00000000712
LinkDB
All DBs
Position
21:6043672..6054466
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AA seq
549 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDNPVEEGGKPKIQYGV
EFTFDADARVAITLYCQAFEEFANGMAVYSPKNPSLVSETVHYKRGVSQQFSMPSFKLDF
CEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPP
GFEPISLLEALNGLRSVSPAIPSAPLYDEINFSGGVGGDSRQLSSPEHLSDGSLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MHSGGDILQDCSSEHSSLTKTESDPPGDLSLPGSSESTESLKSQSTNCSSQPLLCPTSSL
HMEDEHLNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgcagaatcgctggtgttgaggatatcgatatccaggccaac
tcggcctatcgatttcccccgaaatctggtaattattttgcgagccacttcttcatggga
ggggagaaattcgacacaccacatccagagggatacctttttggagaaaatatggacctg
aattttcttggaaataggccagtccagtttccatatgtgacgcctgcaccccatgagcct
gtgaaaaccctgaggagtctggtcaatattagaaaggactctctgcgtttggtcaggtat
aaagatgactctgacaatccggtggaggaaggtggaaaaccaaagattcagtatggtgtg
gagttcacctttgatgctgatgctcgagtggccatcaccctctactgccaagcatttgag
gagttcgccaatgggatggcagtgtacagcccaaagaatccatcactggtctctgaaact
gtacattacaagcgaggggtgagccaacagttctccatgccatctttcaaattagatttc
tgcgagtggaaagaagaagatctgaactttgaccttgaccgaggagtgtttcccatggta
atccaagctgtggttgatgaaggggacgattgccttggacatgctcacgtccttttggca
gcctttgaaagacacgttgatggcagtttctccgtcaagcctctcaagcagaagcaaatt
gtggaccgtgtgagctacctcttacaggaaatctatgggattgagaacaaaaacaaccaa
gaaacaaagccatctgacgatgagaacagtgacaacagcaacgagtgtgttgtctgtctg
tccgacctgcgagatacactcatcctgccctgcagacatctgtgtctctgcaactcctgc
gcagacacactgcgttaccaggccaacaactgtccgatctgcagactgcccttcagagcc
ttgctgcagatcagagctgtgaggaaaaagcctggtgctctttcccctgtgtccttcagc
cctgttctggctcagactatggaccatgacgagcactctagcacagactcggttcctcct
ggctttgaacccatttcactgttagaggctttgaatggtctgcggtcagtttctcctgcc
atcccatctgcacccctctacgatgaaatcaacttctcagggggtgtgggcggtgacagc
agacagctgagctcccctgagcatttaagtgatgggagtctgcagaaaggcaaagtcagc
aagtcacctgacagtacccttaggtctccatcgtctcccatccaggaagaagatgaggag
aagctgtctgagatgtctgatgctcagcctcacacactgctgtccagcagccccgccccc
actgatgccacagcaaccgaggatgtggcagaatccctgtctccagatgacgaggacagg
atgcattctggaggagacatcctacaggactgcagcagtgaacacagcagcttgaccaaa
acagagagcgacccaccgggtgacttgtctctgccaggttcatcagagtcaacagaaagc
ctgaaaagtcagagcacaaactgctctagccagcctctcctgtgtcccacgagcagcctt
catatggaagatgagcacctcaatccctga
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