Sander lucioperca (pikeperch): 116059722
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Entry
116059722 CDS
T07345
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116059722 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116059722 (srebf1)
04131 Membrane trafficking [BR:
sluc04131
]
116059722 (srebf1)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116059722 (srebf1)
Membrane trafficking [BR:
sluc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116059722 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
116059722 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
116059722
NCBI-ProteinID:
XP_031168831
Ensembl:
ENSSLUG00000018853
LinkDB
All DBs
Position
21:10966259..10980774
Genome browser
AA seq
1190 aa
AA seq
DB search
MNGLSFDDPSLDNLDPTLSLNDPSDIDTALLNDIDDMLQLISNQDMEFGGLFDNPPYTVP
PPTQELPGLTQSITSPAPPTTTTTPPPSSSSSILSSSPHLDALLGPPITRSSSTPDKAFQ
PPTFQQSPLAQVPNSTQRQQQQPASPQQAQSLKQPQVEQPQPILSPSSPAQAASPHGSPA
PNPVFSSMPQALFTSPAPQPQPQLQLQPQLQPQSQSQPVQTNYSNHISYTTASVSQPTAI
LSSSPPNVQPVTIQAQLPGLTTTSPLLATSASPPVQTIAPHIQQVPVLLQPQFIKAESLL
LTTLKHDPCMVTTMASSLATTTPVQSTSLQAFMGGGTILTTVPVMVDTDKLPINRIAISG
KPVGLPHKGEKRTAHNAIEKRYRSSINDKILELKDLVAGTEAKLNKSAVLKKAIDYIRYL
QQTNQKLKQENMAFKMAAQKNKSLKDLVAMEVDGPADVKNELPTPPASDVGSPSSFSHCS
SDSESDSPMGEDTKQPSVGMLDRSAAGGSAGGMLDRSRMALCTFTFLFLSLNPLAALLCS
SGSSSVGSPSATATHHAGRSVLGVDIAADSWGWMDWMLPTILVWLLNGILVSGVLIRLLV
YGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPISQLDLACS
ALWSLLRFCLQRLWVGRWLAARAGGLRSDRPLKEDACKSSRDASLVYHRLHQLHMTGKLN
GSHLSAVHMALSAVNLAECAGSCLPVASLAEVYVSAALRVKASMPRILHFTSRVFLSSAR
QACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKESIYSQAGNTGSVGTLTVDPLA
QVTQAFREHLLEKALYCVAQPHGEKSPSQGEGEYADALEYLQLLISASDAAGATSQSFAI
GSNMATVTGCDPHSKWWSSVTVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKAC
LNTFRAVRALLSKPENCQLSLSYSDKASALLRDSLNLGPHCHSSSLDKVVQLLLCDLLLV
MRTNVWRLQQQGAGPAGSGLVSSSGPPGVHQASPPELQGFQQDLSSLRKLAHSFRPAMRR
LFLHEATARLMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRYL
PPSFLSAPGQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcctgtcttttgacgatccttcgttggataatctggatccaacactgtcgctt
aatgaccccagcgatattgacacggccctcttaaacgacattgatgacatgctacagctc
atcagcaaccaggacatggagtttggaggactgtttgataaccctccatacacagtgcct
cctcccacccaagagcttcctggtttgacccagtccatcacttcacctgcccctccaacc
accactaccacacctccaccttcatcttcctcttccatcctaagcagtagcccccacctg
gatgcgctcctgggcccacccatcacccgtagttcctccacgccagacaaggccttccag
cctcccaccttccagcagtcccccctggcccaggtgcccaactccacacagaggcaacag
cagcagccagcctccccgcagcaggctcagagcctcaaacagccccaggtggagcagccc
caacccattctcagcccgtcctcccccgcccaggcagcttcacctcatggctcgccagca
ccgaacccagtttttagctccatgccccaggccctcttcacctcgcctgcacctcagcct
cagcctcagctgcagctgcagccacaacttcagccccagtctcagtcacaaccggtccag
accaactacagcaaccatatcagctacacaactgccagtgtgagccaacccacagccatc
ttgtcatcatcacctccaaatgttcagccagtgaccatccaggctcagctcccagggctg
accaccacttctcctctcctggccacgtcagcgagcccaccagttcaaacgattgcaccc
cacatacagcaagtacctgtgttgctgcaaccccagttcatcaaggctgagtctctgctg
ctgaccactctgaagcacgatccctgcatggtcactactatggcctcatccctggccacc
accaccccagtacagagcacttcactgcaggcctttatgggcggtggcaccatcctgacc
acggtgcctgtcatggtggacactgataagctgcctatcaaccgcatcgccatcagcggt
aagccagtgggcctgccacacaagggagagaagcgcacagcccacaacgccatcgagaag
cgctaccgctcctcaattaatgacaaaatcctcgagctcaaagatctggtggctggtact
gaggccaagctcaacaagtctgcagtgctgaagaaagccatcgactacatccgttacctt
cagcagaccaaccagaaactcaaacaggagaacatggcttttaaaatggcagcccagaaa
aacaagtctctcaaggacctggttgccatggaagtggatggaccggctgatgtgaagaac
gagctgcccaccccgccagcctctgacgtgggctcccccagctctttctcacactgtagc
agtgactcagagtctgacagtccgatgggggaggacactaagcagcctagtgttggcatg
ttagacagatcggcagcaggaggcagtgctggcggcatgttggaccgttcccgcatggct
ttgtgcacgttcaccttcctcttcctctccctcaaccctctggccgcgctgctctgctca
tctggcagcagctcagttggaagcccctcagccactgccacccatcacgcaggaagaagc
gtcctgggtgtggatatcgcagcggactcatggggctggatggactggatgctgccaact
atactggtgtggctactgaacggtattctggtgtcaggggttctgatccgactgttggtg
tatggagagcctgttaccagacctcactctggatcctctgtcttgttctggaggcaccgc
aagcaggctgacctggacctagctagaggagattttgcccaggccagtcagaacctatgg
acctgtctgaaggctctaggtcgtcctttgcctatctctcagttggacctagcctgttct
gcactctggtccctgctaagattctgcctccagcgcctttgggtgggccgctggctggct
gccagggctgggggcctgcgatctgaccgccccctgaaggaggacgcctgcaaaagcagc
cgtgacgcctcccttgtttaccaccgtctgcaccagcttcacatgacaggtaagctgaat
ggtagccatctgtcagcagtgcacatggctctaagtgcggtaaacctggcagagtgtgct
ggctcctgtctgcctgtagccagtctggctgaggtctacgtctctgcagctctacgggtc
aaagccagcatgccaaggatcctacattttacctctcgtgtgttcctgagcagtgcccgt
caggcgtgcctgtcgtccagtggcagtgtgcctccagctatgcagtggctgtgtcaccca
ctaggtcaccgcttctttgtggatggggattgggctattcgcagcactcccaaagaaagc
atctacagccaggctggcaatactgggtctgttggtactcttacagtggatcctctggcc
caggtgactcaggcattcagggaacacctcctggagaaagctctttactgtgtagcccag
cctcatggagagaaaagccccagtcagggagagggggagtatgctgatgccctggagtac
ctccagctgttgattagtgcgtcagatgcagctggtgccacctcccagtcctttgctatt
ggctccaacatggccactgtaactggctgtgacccccactcaaagtggtggtcctcagtt
accgtggtgatcatcaactggctccaaggagatgacgccgcggcggagagactgtatccg
actgttgagcacctaccccgcagtctgcagaacgcagagagtcttctgcccaaggcgtgt
ctgaacacattcagggcggtgcgggctctgctgtccaagcctgaaaactgccagctgagt
ctgagctacagcgacaaggccagtgccctgctccgagacagcctcaacctaggaccacac
tgtcacagctccagtttagacaaggttgtccagttgctcttgtgcgatctcttattggtg
atgaggaccaacgtgtggcgcctgcagcagcagggggccggtcctgccgggtcagggttg
gtgagtagcagcggccccccaggggtccaccaggcctccccgccggagctccaaggcttt
cagcaggatctcagctccctacgcaagctggcacacagcttcaggcctgcaatgcgaaga
ttgtttcttcatgaagccactgccaggctgatggcaggggccagtcccacccgcacacat
cagctcctggatcgctcactgcgacgcagggcaacgcccggagccaagacagaggagtgt
gagacgcggccaggccagcgggagcaggcagaggctgtgatgctggcgtgccgctacctt
cctccctcctttctgtctgctcccggccaaagggtgggcatgctggcggatgccgcccgc
accctggagaagctgggagacaagaggaccctccacgactgccagcaaatgatcatcaag
cttggcagcggcaccaccgtaaccaacagctag
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integrated database retrieval system
