Sander lucioperca (pikeperch): 116059779
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Entry
116059779 CDS
T07345
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116059779
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Others
116059779
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Fn3_ROS1
Fn3_PBP1
VWA_3
Motif
Other DBs
NCBI-GeneID:
116059779
NCBI-ProteinID:
XP_035848922
Ensembl:
ENSSLUG00000018494
LinkDB
All DBs
Position
16:complement(14554267..14807115)
Genome browser
AA seq
1921 aa
AA seq
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MASCELDRWTNNLTTPGPGSGELLNTVDQSRFDGRGDTSELPIQLVRSQETYDLRRCALL
SAASRMQFSVRLSVCVLGFVLVSLFPQPARGQVSTPRRFRAKVLSPTELHVSWKEPKGQF
ESYKVIYTTRPGGEQKEIQVSKQEAKLLIQDFDPSKEYNFKIIAVSGGQQSKPLQAKHEA
QSGVEMVESQRGRDSGVAEETNEISEAEEKFMCKTPAVSDIVILVDGSWSIGRINFRLVR
TFLENLVKAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTTKEAVMEAVKNLPYKGGNTLTG
LALTFILENSFKPESGSRPGVPKIGILITDGKSQDDVIPPAQSLREAGIELFAIGVKNAD
ENELKAIASPPEETHVYNVADFSVMSDIVDGLTKTVCERVEQLDKQLRGGGQPARPPTAV
EAPRDLVTSEVTARSFRVRWTHAPGQVEKYRVVYYPASGGKPEEKVVQGTENSVELTYLN
SLTEYQVAVFAVYHSSASEALRGSATTLALPMVNDLELFDITHSTMRVRWKIAAGASGYM
ILYAPLTEGDPADEKEVKVEDSVNEVELEGLTPATEYTVTVYALYGEEASDPMTSQQTTL
PLTPARNLRFSNVDHSSARLTWDSASRKAKGYRIMYVKTNGVQTNEVDVGLVTTWLLKNL
TSLTEYTIGVFAIYDEGQAEAATESFTTKTVPDPPDLKSSDISTDSFRVSWQHPASDVVM
YRLTWTPTDGGDSEEVLVNGNINTYLIKGLSPVTEYEVLLAAIYMNEVESDEVVLVESTV
KRTTAVPTTTVTTAAPRFGVRNLRIDEETTFSMRVAWQPGDSRNVRHYRLSYISAKGDRA
EEQRTVPTGQNSLILQPLLSDTEYKVAITPVYPDGDGPTVARMGRTLPLSAPRNLRLSEE
WYNRFRISWDAPPSPTMGYRVVYQPVSAPGSALETFVGEDVNTMLIVNLLSGTEYSVKVI
ASYTTGSSEALSGRAKTLYLGVTNLSAYQVRMNSFCAQWQPHRHANAYRVTIESLLNGQK
QETKLSGGANRHCFNNLKANTQYKMSVYAQLQDGSEGPAVTVTEKTLPIPTPPPTTPPTT
TPLPTIPPAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTSGALDRIGPDGTQVA
IAQFSDDARTEFKLNSYGDKERLLDAINKISYKGGNTKTGRAIQHVKENIFTAEGGMRRG
IPNVLVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVD
DLDAFTKIEEKLVTFVCEAATATCPSVPMSGSTTPGFRMMELFGLVENRYGSVSGVSMVP
GTFNTFPCFHLHSNALMAQPTRFIHPEGLPSDYTITLLFRLLPDTPEEPFALWEILNKNN
EPLVGVILDNGGKSLTFFNNDYKGEFQTVTFEGPEIKKLFYGSFHKLHIAISKTSAKVVI
DCKMVAEKTINAAGNITIDGTEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWASRDKCC
ELPGLRKEADCPAMPKACTCTQDSKGPPGPAGPPGGPGIRGARGDRGEPGPVGPTGPVGD
TGVPGPQGPQGPQGPSGRSIIGPPGSPGERGQKGEAGQQGTQGIAGRAGPQGREGPAGTR
GLPGKDGPPGRQGASGTMGTPGAPGAPGHTGPSGKQGELGPPGPPGSKGEKGERGDLQST
ASVQDIARQVCEQLIQSHMARYNSILNHVPSPPVSIRTVPGPPGEPGRQGSPGPQGEQGP
TGRPGFPGQNGQNGQPGERGQPGEKGEKGSQGVGVQGPRGPPGPPGAQGQGRPGSQGPSG
RPGNPGTPGRPGVPGPVGSTGPPGYCDQNSCVGYNVGVQLPPNVFENYGEVEEDDPYRYY
EPSYPAPRPVAPDDPALALDDIELSSPGVHRSSRSLNAKEERVAPKRRLKREAKALPGLI
K
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtgtgaactggacaggtggacaaataatctgacaactccgggtccagggagc
ggagagttgctgaacactgtggatcagagtcgctttgacgggaggggggacactagtgag
cttcccatccagcttgtccggagccaggaaacatatgatctgagaaggtgtgccctcctg
tctgctgcttccaggatgcagttctcagtcagactgagcgtctgcgtgctgggcttcgtc
ctcgtctctctgttccctcagccagcacggggtcaagtttcaacgccacggagatttcgt
gccaaagtcctgagccccaccgagctgcatgtgtcgtggaaagagccgaaaggacagttt
gaaagctacaaagtcatttacaccacacggccaggtggagagcagaaggagattcaggtg
tcgaagcaggaagcaaaactgctcatccaagactttgacccctctaaagaatacaacttt
aagatcattgctgtcagtggaggacagcagagcaaacctctccaggccaaacatgaagct
caatcgggcgtcgagatggttgagtctcagaggggacgagacagcggtgtcgccgaggaa
accaacgagatctcagaagctgaagagaagtttatgtgtaagactccggccgtatccgac
attgttattctggtggacggctcctggagtatcggccgcatcaacttcaggctcgtccgg
acgttcctggagaatctggtcaaggctttctctgtagagttcgacaaaaccaggattggc
ctggctcagtacagcggagacccccggatcgagtggcatctcaacgctcacaccaccaaa
gaggctgtgatggaggctgtgaagaacctgccgtataaaggcggaaacacactgacgggt
ctggctctgaccttcatcctggagaacagcttcaaaccggagtctggatccaggcccggc
gttcccaagataggaatcctcatcactgacgggaagtcccaggacgatgtgataccccca
gcgcagagcctgagggaggctgggatagaactgtttgccattggtgtgaagaacgccgac
gagaacgagctgaaggccatcgcctctccgccggaggaaacccacgtctacaacgtggcc
gacttcagcgtgatgagcgacatcgtggacggcctcaccaagaccgtctgtgaacgcgtg
gagcagctcgacaagcagctccgagggggaggacaacccgcccgcccgcccacggctgtg
gaggcgccgcgcgacctagtgacatctgaggtcacggctcggagtttccgggtgaggtgg
acccacgcgccgggccaggtggagaaataccgcgtggtctactacccagccagcggagga
aagccggaggaaaaggtggtccaggggacggagaacagtgtggagctcacctacctgaac
tctctgacggagtaccaggtggccgttttcgccgtctatcacagctccgccagcgaggct
ctgcgaggaagtgctaccacactggccctgccgatggtgaacgacctggagttgtttgac
atcactcacagcaccatgagggtccgctggaagatcgccgccggggcttctgggtacatg
atcctgtacgccccgctgacggagggagaccctgcagacgagaaggaggtgaaggtggag
gactctgtgaacgaggtggagctagagggattgactccggccacagagtacacagtgacg
gtttacgccttatacggagaggaggccagcgaccccatgaccagccagcagaccacatta
ccactgaccccggcgaggaacctgcgtttctccaacgtggaccacagctccgcccggctg
acatgggactctgcctccaggaaggccaaaggctaccgcatcatgtacgtcaaaaccaac
ggagtccagaccaatgaggtggatgttggccttgtgacaacctggttgctaaaaaacctg
acctcgctgacggagtacacaatcggggtctttgccatctacgatgagggacaagctgag
gccgcgactgaaagcttcaccacaaaaaccgtccccgacccgccagatctgaagagcagt
gacatctccacagacagcttcagggtgtcatggcaacacccagcatctgatgtggtgatg
taccgactcacctggacgcccaccgatggaggggacagcgaagaggttctggtgaacgga
aacattaacacctacctgataaaaggactgagccccgtcacggagtacgaagtcctcctc
gctgccatctacatgaacgaggtcgagagcgacgaggtggtcctcgtagagtccaccgta
aaaagaacgaccgcggtgcccacaacgaccgtcaccacagcagctcctcgtttcggggtg
aggaacttgaggatcgacgaggaaaccaccttcagcatgcgggtggcctggcagcccggg
gactcgaggaacgtccgacattatcggctgagctacatcagcgccaagggagaccgagca
gaggagcagaggacggtgcccaccggtcagaacagtctgattctgcagccgctgctgtcg
gatacggagtacaaagtcgccatcacgcccgtctaccccgatggagatgggcccacagtg
gcgcggatgggacgaacgcttcctctgtcagctcccaggaacctgcggctatcggaggaa
tggtacaaccgcttcaggatcagctgggatgctccaccgtcgcccaccatgggctacagg
gttgtctaccagcccgtatctgctcctggctccgctttggagaccttcgtgggcgaggac
gtgaacaccatgctgatcgtcaacctgctgagcgggacggagtacagcgtcaaagtcatc
gcctcctacaccaccggatccagcgaggccctgtcagggagggccaagaccttgtatctg
ggggtgactaacctgagtgcgtaccaggtgaggatgaacagtttctgcgcccagtggcag
cctcaccgacacgccaacgcctaccgagtgaccatcgagtctctgctcaacggtcagaag
caggagacgaagctgagcggaggagcaaacagacactgtttcaacaacctgaaggccaac
acgcagtacaagatgagcgtgtacgctcagctgcaggacgggagcgaagggccggccgtc
accgtcacggagaagacactacccatcccgaccccgccgccgaccacgccccccaccacc
acgccgctacccacgatcccccctgccaaggaagtctgtaaagcagccaaagccgacctg
gtcttcctggtcgacggttcctggagtatcggtgatgacaacttcctgaagatcatccgc
ttcctgtacagcaccagcggagctctggaccggatcggcccggatggcacacaggtggcc
atcgcgcagttcagcgacgacgcccggaccgagttcaagctgaactcgtacggcgacaag
gagcgtctgctggacgccatcaacaagatctcctacaagggaggaaacaccaagacgggt
cgagccatccagcacgtgaaggaaaacatcttcactgcagagggggggatgaggcggggg
atccccaacgtcctcgtggtcctcaccgacggccgctctcaggacgacgtcaacaaggtt
tccaaggagatgcagatggaaggctacattgtgtttgcgatcggcttcgctgacgcggac
tacggcgagctggtgagcatcgccagtaaacccagcgaccgacacgtcttcttcgtggac
gacctggacgccttcaccaagatcgaagagaagctggtgaccttcgtgtgcgaggcggcc
actgccacgtgtccgtccgtgccaatgagcggcagcacaacaccaggtttccgtatgatg
gagctgtttgggctggtggagaaccgctacggcagcgtctccggtgtttccatggtaccc
ggcaccttcaacaccttcccctgtttccacctgcacagcaacgctttaatggcacagccg
accaggttcatccatcctgaagggctgccgtctgactataccatcacgctgctgttcaga
ctgctgcccgacacccccgaggagcccttcgccctctgggagatcctcaacaagaacaac
gagccgctggtcggagtcatcctggacaacgggggaaagtctctgacgttcttcaacaac
gactacaaaggagagttccagacggtcactttcgaaggaccagaaattaaaaaactcttc
tacggcagcttccataagcttcacattgcaatcagcaagacgagcgccaaagtggtgatc
gactgcaagatggtggccgagaaaacaatcaacgcagcgggaaacatcaccatcgacggg
acggaagttctgggccggatggtccgctccagagggaacaaggataactctgcaccgttc
cagcttcagatcttcgacatcgtctgcagcacttcatgggccagcagagacaagtgctgc
gaacttcctggtctgaggaaggaggcagactgcccagccatgcccaaagcctgcacctgc
acccaggacagcaaaggcccccccggccctgctggaccacctggaggcccaggaatccga
ggagccagaggtgatcgcggagagccaggcccagtggggccaactggtccagtaggtgat
acaggtgtacccgggcctcagggaccccaaggaccacagggacccagcggacgctccatc
ataggacccccaggttctccaggagagagaggacagaaaggtgaagctggacaacaagga
acacagggaatcgctggccgagccggacctcaaggcagagaaggcccggcaggaaccaga
gggctgccaggtaaagacggcccgccgggcagacagggcgcctcaggaaccatggggacg
ccaggagctcccggggcccccggtcacacgggcccttcaggaaaacagggagaactggga
ccaccgggtcctcctggaagcaaaggggagaaaggtgaacggggtgacctgcagtcgaca
gcgtcagtccaggacatcgccaggcaggtctgtgagcagctcattcagagccacatggca
cgctacaactccatcctgaaccacgtgcccagtccgccagtgtccatccgcactgtgccg
ggaccccccggagagcctggcagacagggatctccagggccccagggagaacagggaccc
acaggaagacccggcttcccaggacagaacggacagaacgggcagccgggagaaagaggg
caaccaggagaaaagggtgagaaaggatctcaaggtgttggagtccagggccccagagga
cctccaggaccccccggagctcaaggccagggcagacctggcagtcagggtccctcaggg
cggcctggaaatcccgggacccctggtcgtcccggggtccctggacccgtcggctccact
gggcctccgggctactgcgaccagaactcctgtgtgggctacaatgttggagtccaactg
cctcccaacgtcttcgagaactacggcgaggttgaggaggacgatccctaccgctactat
gagcccagttacccggccccgcggcccgtggcgcccgacgacccggcgctcgccctggac
gacatcgagctgagttcccccggcgtccaccgcagctcccggagcctgaacgccaaggag
gagagagtcgcaccaaagaggagactaaagagggaagcgaaggcgctgcccggactaatt
aaatga
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