Sander lucioperca (pikeperch): 116059908
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Entry
116059908 CDS
T07345
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116059908
03410 Base excision repair
116059908
03420 Nucleotide excision repair
116059908
03430 Mismatch repair
116059908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116059908
03036 Chromosome and associated proteins [BR:
sluc03036
]
116059908
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116059908
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116059908
DNA Replication Termination Factors
ELG1-RFC complex
116059908
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116059908
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116059908
Check point factors
HRAD17(Rad24)-RFC complex
116059908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Rad17
Mg_chelatase
AAA_24
AAA_11
Viral_helicase1
DEAD
AAA_19
AAA_18
MipZ
RuvB_N
AAA_30
AAA_assoc_2
ABC_tran
DNAX_ATPase_lid
nSTAND3
AAA_5
MeaB
AMP-binding_C_3
AAA_28
AAA_25
DUF815
AAA_23
NTPase_1
RNA_helicase
MCM
SLFN-g3_helicase
bpMoxR
Motif
Other DBs
NCBI-GeneID:
116059908
NCBI-ProteinID:
XP_031169038
Ensembl:
ENSSLUG00000021219
UniProt:
A0A8D0DC34
LinkDB
All DBs
Position
12:complement(23646782..23651771)
Genome browser
AA seq
355 aa
AA seq
DB search
MEAEMVEAECEQQKPVESSQKADSGTGEPPGRVSYELPWVEKYRPVTLNQIVGNEETVSR
LEVFAREGNVPNIIIAGPPGTGKTTSILCLSRALLGASMKDAVLELNASNERGIEVVRNK
IKMFAQQKVTLPKGRHKMIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYAKLTDGQILARLQDVVHQETLSVSDDGLEAVIFTAQGDMRQALNNLQST
HSGFGFINSENVFKVCDEPHPLLVKGMLEHCVAGNIDEAYRVVEALWALGYSPDDIIGNI
FRVCKTLPMAEYLKLEFIKEIGYTHMRMSEGVNSLLQMAGLLGRLCSKTAPPAAR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgagatggtggaggctgagtgcgagcagcagaagccggtagaaagcagccag
aaggcggactcaggaaccggagaaccgccgggtagagtctcctacgagctgccctgggtg
gagaagtacaggccggtcacactgaaccagatcgtggggaacgaagagacggtgagtcgg
ctggaggtgttcgccagagagggaaacgttcccaacatcatcatagcaggtcctccagga
acagggaagacgaccagcatcctgtgtctgtcccgagcgctgctgggagcctccatgaag
gacgccgtgctggagctcaacgcctccaacgagaggggaatcgaggtggtgaggaacaag
atcaagatgtttgctcagcagaaagtcacgctgcccaaaggacgacacaagatgatcatc
ctggacgaggccgacagcatgacggacggcgcccagcaggcgctgcggaggatcatggag
atctactcgaagacgacgcgcttcgctctggcgtgcaacgcgtcagataagatcatcgag
cccatccaatcacgctgcgccgtgctgcgctacgccaagctgacggacggccagatcctg
gcacgcctgcaggacgttgtccaccaggagacgctctcggtgtctgacgacggcctggag
gccgtgatcttcaccgcccagggagacatgagacaggcgctgaacaacctccagtcgacc
cactctggcttcggcttcatcaacagtgagaacgtgttcaaagtgtgtgacgagccccac
cctctgctggtgaaaggcatgctggaacactgcgtggcgggcaacatcgacgaggcgtac
cgcgtggtggaggcgctgtgggcgctcggatactcgccagatgacatcatcgggaacatc
ttcagggtctgcaagaccctccccatggcagagtacctcaagctggagttcatcaaggag
atcggctacacccacatgaggatgtctgaaggcgtgaactctctgctgcagatggccggc
ctgctggggagactctgcagcaagacagcgccccccgctgcccgctga
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