Sander lucioperca (pikeperch): 116059922
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Entry
116059922 CDS
T07345
Name
(RefSeq) nuclear receptor ROR-alpha A-like
KO
K08532
RAR-related orphan receptor alpha
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116059922
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116059922
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116059922
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116059922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
MIOS_a-sol
Motif
Other DBs
NCBI-GeneID:
116059922
NCBI-ProteinID:
XP_031169052
Ensembl:
ENSSLUG00000016495
LinkDB
All DBs
Position
3:complement(5567182..5600149)
Genome browser
AA seq
481 aa
AA seq
DB search
MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCL
IDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDTLYAEVQKHRLQQQQQQQGPLL
LSHPSLSSPSPGEAEPLSPHFGLTELSEELGGYVKQNSPEGGSVSSKADSGGGVEGRGFY
LDIQPSPDQSGLDINGIKPEPLCDNGSNNGFFPYCSFSDGDTSPTVSMAELDHLVQTISK
SHLETCQYLREELQQMSWQKFPQDEVESYQSKPREVMWQLCAVKITEAIQYVVEFAKRID
GFMDLCQNDQIVLLKAGSLEVVLVRMCRLFDSQNNSVYFDGKFAGPDVFRALGCDDLIAS
VFDFASSMCSLRLSEDELAVFSAFLLLSADRSWLQEKLQVEKLQQKTQLALQHVLQKNRR
EDGALNKLRCKVSALRSLCTRHTETLSAFRAVYPDVVRTHFPPLYKELFGADLELTLHSG
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatttctgccatgaaagctcagattgaaatcattccctgtaagatctgt
ggagataaatcatcagggattcactacggggtgatcacctgcgagggctgtaagggtttc
ttcaggcggagtcagcagagtaacgccgcctactcgtgtcctcgccagaaaaactgtctg
atcgaccgaacgagccgcaaccgctgccaacactgccgtctgcagaaatgtctggctttg
ggcatgtcccgagacgctgtgaagtttggtcgcatgtccaagaagcagcgggatactttg
tacgctgaggtgcagaaacatcgcctccagcagcagcagcagcagcagggtcccctcctc
ctgtcccaccccagcctcagcagcccgagcccgggcgaggcggagccgctgtcccctcac
ttcggcctcacggagctgtcagaagagctgggaggctacgtgaaacaaaactcacctgaa
ggaggatctgtatcgtccaaggcggactctggagggggagtagaaggtcgggggttctac
ctggatatccagccgtccccggatcagtctggactcgatattaacggcatcaaaccggag
ccgttgtgtgacaatggatccaataacggcttcttcccatactgctccttcagcgacgga
gacacttcacccacagtatccatggctgaactcgatcacctggttcagaccatctcaaag
tctcacctggagacgtgtcagtacctgagggaggagctgcagcagatgagctggcagaag
ttcccgcaggacgaggtggagagctaccagagcaagccgcgggaggtgatgtggcagctg
tgtgccgttaagatcaccgaggccatacagtacgtggtggagttcgccaaacgcatcgac
ggcttcatggatctctgtcaaaacgaccagatcgttctgctgaaagccggctctctggag
gtcgtcttggtccgaatgtgtcgcctgtttgactcacagaacaacagcgtctacttcgac
gggaagtttgcaggtccggacgtcttcagagcgctcggttgtgatgacttgatcgcgtca
gtgtttgactttgctagcagcatgtgttctctgcgtctgtcggaggacgagctcgccgtg
ttctcagcgttcctcctgctgtctgcagaccggtcgtggctgcaggagaagctgcaggtg
gagaagctgcagcagaagactcagctggccctgcaacacgtcctgcagaagaaccggaga
gaggacggagcgctcaacaagctcagatgtaaggtgtcagcgttgcgctccctgtgcacc
cgtcacacggagacgctatcggcgttccgcgccgtgtaccctgacgtcgtgcggacacac
ttccccccgctctataaggagctgttcggggccgacctcgagctgacgctgcacagcggc
gactaa
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