Sander lucioperca (pikeperch): 116060003
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Entry
116060003 CDS
T07345
Symbol
lum
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116060003 (lum)
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
116060003 (lum)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_14
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
116060003
NCBI-ProteinID:
XP_031169174
Ensembl:
ENSSLUG00000013524
UniProt:
A0A8C9YRR8
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All DBs
Position
20:complement(8309123..8313226)
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AA seq
342 aa
AA seq
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MFPLRVPLLVVLVSVALCQYYDYDYQPHSMQGPSGPNCNQECDCPFNFPTAMYCDNRKLK
FVPVVPTGIKYLYLQNNQIEEIKAGVFDNVTDGLRWLILDNNQITNAKIAKGTIDKLTVL
EKLHFSYNNLTEPVVPPSKSLDELKLMHNKLSKFPSGLLSDKENLTSINLQHNQLTSDAI
GGAFKGPKKLLSLDMSHNKLKKLPAGVPSSLEILYADYNDIDSVGAGYLNKMPSLQYLRI
SNNKLVDSGLPAGVFNVTSLVELDLSFNKLQSIPEINEKLEQLYLQANEINKFDLASFCK
HITPVNYSNLKHLRLDANNITHSSMPPDSSNCLRLLSDVMFE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttccctctccgtgtacccctgttggtcgtattggtcagcgtggcactgtgccagtat
tatgattatgactaccagcctcattctatgcaaggaccctcagggcccaactgtaatcaa
gaatgcgactgcccattcaacttccccactgccatgtattgtgacaaccgcaagctcaag
tttgttccagtagtcccaacagggatcaagtacctgtacctccagaacaaccagatagaa
gagatcaaggcaggagtgtttgataatgtcactgatggacttcgctggctgatacttgac
aacaaccagattaccaatgctaagatagcaaagggcacaatcgacaaacttacagtcctg
gagaagctacacttcagctacaacaacctgacagagccagttgtccccccctcaaagtcc
cttgatgagctgaagctaatgcacaacaagttatccaagttcccctctggactcttgagt
gacaaggagaacttgacctccatcaaccttcagcacaatcagctaacgtccgatgccatc
gggggggcattcaaagggccaaagaagctgctgtccctggacatgagccataacaagctg
aagaagctgcctgccggagttcccagttcactggaaattctctacgctgactacaatgac
attgacagtgtcggagcaggatacctgaacaagatgccctcgctgcagtacctgaggatc
tccaacaacaagctggtggactccggactccctgctggagtgttcaatgtgacatcacta
gtggagctggacctgtctttcaacaaactgcagtccatccctgagatcaacgagaagctg
gagcaactctacctccaggccaacgaaatcaacaagtttgacctggcaagtttctgcaag
cacataactcctgtcaactattccaacctgaagcatctgcgtctggacgccaacaacatc
acacacagcagcatgccccctgactcctccaactgcctgcgccttctttcagatgtcatg
tttgaataa
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