Sander lucioperca (pikeperch): 116060016
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Entry
116060016 CDS
T07345
Symbol
ppfibp1a
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116060016 (ppfibp1a)
Membrane trafficking [BR:
sluc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116060016 (ppfibp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PIN_6
Motif
Other DBs
NCBI-GeneID:
116060016
NCBI-ProteinID:
XP_035851908
Ensembl:
ENSSLUG00000002793
LinkDB
All DBs
Position
20:5583068..5711544
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AA seq
1001 aa
AA seq
DB search
MKFVPFQLSSFGCANYKLTQASITQVTGKRRQHDMSYWRYSCKFTAGFCNQIGGCIRLDG
GGVLTLPATIRGSVEVWVKDTNLDSQSLLLFPATARFIEHKMMSDASDMLAAALEQMDGI
IAGSKAMDYSNGLFDCQSPTSPFLGGLRVLHLLEDLRGVLELMDNEERDNLRCQIPDSTA
EGLAEWLQGRLTNGHGSEAVYQERLSRLESDKECLILQVSVLTDQVEVQGEKIRDLDNCL
DHHREKLNATEELLQQELLNRTTLETQKLELMTEVSSLKLKLTAHRDNEGLYQEVTDLRF
RVTDIENERLQCEKKLKATKRPKRNTERFTGDEEELQFLQQQLEEREVELTRLKDESRLR
VESHNRAEGGERDSEVLKMKMALESLASANDVKEQRIKELEESLTKCKKVQQLVKEKLEE
NDYDDIPEDPSASVSMEMDQVTLVFEGEAGRNSGESIPCIAVLSEMNDLDRERQLQAAKS
SLDVPQPGSSAISSISDQAKKNAGPGSSSPTRANTTSDDSFGSKKARSSFGRGFFKLRGG
KQTASSPNLAETERKGTEHLDLAGVPPQKSHDGAPLPSSPETKKKSKGFMKFFGRLKRSH
STSFNLDDAAEMEFRRGGVRATAGPRLGWSRETKHNAVDVPFSQWSKDEVCAWLHEQGLG
LYVAQGQSWIKSGQTLLRASQHDLEKELCIKQPLHRKKLQLALQALGSEEDDLKGRLDSN
WVTRWLDDIGLPQYKSHFDEARVDGRVLHYMTVEDLLSLKVGSVLHHLSIKRAIQVLRLN
CYEPNCLRRRPSDENNMTPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEP
RFNVEALALLLNIPPNKTLLRRHLATHFHLLIGSEAQRLKQDCLENPDYTVLTATARVKV
KPRRLSFGGFGTLRKKRQDDGEDYICPMNVEMPKSSSFHKGLQIYEEHLDHLEQMEDSEG
TVRQIGAFSEEINNLTIMLKEDEFCHEISVDAAETDHNSSV
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgttccgtttcaactatcctctttcggctgtgctaactataagctaacgcag
gctagcatcacacaggtaactggaaaaagaagacaacatgacatgagctactggagatat
agctgcaaattcactgctggcttctgcaatcaaattggaggttgcatacgtttagatgga
ggtggtgttctcactctacctgcgaccatcagggggtctgtggaggtttgggtgaaggac
acgaaccttgactctcaaagcttgctgctcttcccggccactgcaagattcattgagcac
aagatgatgtccgacgccagtgatatgttggcagcagctttggagcaaatggatgggatc
atagcagggtccaaggccatggactactccaacgggctgtttgactgccagtcgcccact
tcacctttcttgggtggccttcgggtgctgcacctgctggaggacctgcggggagtgctg
gagctcatggacaacgaggagagggacaacctgcggtgtcagatccctgattccactgca
gaagggctggcagagtggctgcagggacgattgactaacggccacggctcagaagcagtc
taccaagaacgtctgtcacgactggaaagtgacaaagagtgtcttattcttcaggtaagt
gttctaacagaccaggtggaggtgcaaggtgaaaagatccgggacctagacaactgcctg
gatcatcatcgagagaaactaaatgctactgaggagctgctgcaacaggagctgttgaac
cggacaacactggagacccagaagctagagctgatgaccgaggtgtccagtctgaaactg
aagctgacggctcacagggacaatgagggcttgtaccaagaagtaacagacctgcggttc
agggtgactgacatagagaatgaaagactgcagtgtgagaagaaactcaaagctaccaaa
cgtccaaagcggaacactgaacggttcactggagatgaggaggagctgcagtttctgcag
cagcagctggaggagcgagaggtggagctgacgaggctgaaggacgagagcagactgagg
gtggagagccacaacagagctgagggaggagagagagattcagaagtgttgaagatgaag
atggcgttggagtcactggcgtcggccaacgatgtgaaggaacaaaggataaaggagctg
gaggagtcactcacaaagtgcaagaaggtgcagcagctggtcaaagagaagttggaggaa
aatgactatgacgatatcccagaggatccctcggcttctgtgtccatggagatggatcag
gtcaccctggtgtttgaaggggaggcaggaagaaactctggcgagtctattccatgtata
gcagtgctttctgaaatgaatgacctggacagagaacgacagttacaggcagccaaaagt
tccttagacgtcccgcagccaggcagctcagccataagcagcatctctgaccaggccaaa
aaaaatgccggacctggttcctcatctcctaccagagcaaacaccacaagcgatgacagc
tttggttccaagaaggcccgttcttctttcggccggggcttcttcaagctgcgtggaggc
aagcagacagccagctctccgaacctggctgagacagaacgtaaaggcacagagcacctg
gatttggccggtgttcctccacaaaaatctcatgatggagcccctctaccgtcctcacct
gaaaccaaaaagaagtccaaaggcttcatgaaattctttggcagactaaagaggagtcac
tctacctccttcaacctggatgatgcagcagagatggagttcaggaggggaggagtcaga
gccacagccggccctcgactaggctggtcacgtgaaactaaacacaatgctgtcgatgtg
cctttctcgcagtggagtaaagatgaagtgtgtgcgtggctgcatgagcagggccttggg
ttatatgttgcccagggtcagagctggattaaatcgggacaaacgctactgcgggcatca
caacacgatctggagaaggagttgtgcattaagcagcctctccacaggaagaagttgcag
ctggctctacaggctctcgggtcagaggaggacgatttaaagggcagactggacagcaac
tgggtgaccaggtggctggatgacatcggcctcccgcagtacaaaagtcactttgatgag
gctcgtgttgatggacgcgtgctgcactacatgacggtggaggacttgctgtctctgaag
gtgggcagtgttctccatcacctcagcatcaagagggccattcaggtcctccgcctcaac
tgctacgaacccaactgtctcaggcgacgaccctctgatgagaacaacatgacaccagca
gagatctcccagtggaccaaccacagagtaatggagtggctccggtctgtggatttggca
gaatacgccccaaatctgaggggcagcggtgttcatggaggactgatggtgttggagccc
cgcttcaacgtggaggcgctcgcccttctgctcaacattcctcccaacaaaaccctgctg
agacgccacctggccacacatttccacttgctcatcggctctgaggcgcagcggctcaaa
caggactgtctggaaaaccccgattacaccgttctcaccgctaccgccagggtcaaggta
aagcctagacgcctgtcattcggtggttttggcactttgaggaagaaacgtcaggatgat
ggcgaggactacatctgccccatgaacgtggaaatgcccaagagcagcagcttccataag
ggcctccagatctacgaggaacacctcgaccacctggaacagatggaagactctgaaggg
actgtgagacagataggagcattttctgaggaaatcaacaatctaacgatcatgctgaag
gaagatgagttttgtcacgagatctccgtcgacgcggcagaaaccgatcacaactctagt
gtttga
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integrated database retrieval system
