Sander lucioperca (pikeperch): 116060106
Help
Entry
116060106 CDS
T07345
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116060106 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116060106 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
SKA1
CdiA_C_tRNase
Motif
Other DBs
NCBI-GeneID:
116060106
NCBI-ProteinID:
XP_031169386
Ensembl:
ENSSLUG00000007537
UniProt:
A0A8C9XYC8
LinkDB
All DBs
Position
20:4858827..4887237
Genome browser
AA seq
1780 aa
AA seq
DB search
MSLIIHFVTALALWWPVRALLPEFGDVCTKGSCYPATGDLLIGRAHRLSVSSTCGLKRPE
RFCIVGHLEDEKKCFVCDSRKPFNEYNNQGSHTIENLVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFRTFRPAAMLIERSMDFGKTWQVYRYFAYDCESSFPGVPSRPM
VKVDEVVCDSHYSDIEPSTEGEVIFRVLDPVFKIEDPYSLRIQNMLKITNLRVKFTKLHT
LGDNLLDSRDDVIEKYYYSLYDMVVRGNCFCYGHASECAPMDGATFDAEGMVHGRCACNH
NTEGLNCERCQDFYHDMPWRPAEGQNTHACKKCECNLHSTSCHFDLAVYMTTGNISGGVC
DDCQHNTMGRQCEQCAPFYFQHPNRDLRDPNVCEPCNCDPSGSLQGGLCDSHTDVAAGMI
SGQCRCKANVEGERCDHCRQGHHGLGQGPHGCLSCTCNPLGTLPGGNPCDSNTGRCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCRSCDCDQGGAVNNNCEPHTGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEDAEHGPGVTVVPRPYPLDRSPTWTGMGFVNVPEGAYLEFTINN
IPESMDYDILIRYEPQLPDQWEQVDIRVQRPLFNPPNYSSHCGNSIQSGDEQSISLSPGS
RHVLLVTPVCFEQGLNYTIRLTLPLYSSVSDVQSPYTLIDSLVLMPRVRELDMFHGIDGD
GAWDTFQRYRCLESSQSVVKSPLTDICSDYIFSVSALLHKGAMACQCDPQGSLSAVCEPS
GGQCRCRSNVVGRNCDHCAPATFLFSPSGCRSCDCDPRGSISAFCHEATGQCECVPGATG
RQCSHCLPGFWGFPQCRPCQCNGHSEYCHPQTGECQGCRDFTTGHHCERCLDSYHGNPEL
GSGGHCRPCMCPDGPRSGRQFSDSCYLVANSNQLVCVCSPGYKGARCDECAPGYFGNPLV
PGGRCMPCQCNSNIDMHDPGSCDARTGACLKCLYHTEGYGCQHCKQGYYGNAGTQSCRKC
MCYSAGTSPQACSSPDECQCNQHSGQCPCQPNVVGQNCDRCAVDTWNIASRTGCQRCDCH
PVHSSGSSCNEVTGQCLCKPGFGGKTCRECRELFWGDPEVKCHACDCDSRGISSNQCHRA
TGQCTCAKGVSGRRCDECARGYMGEFPTCEPCHQCFAVWDTVVGELTNQTQRLEAQVTQL
QTSGVTAPYKDLVGSLERNAKAVREIVENNPAAVKLEKIQDLMHQITGVMSYLHGKLNTT
EENLNVLHSDANATDADLDALTAEANQLELSVQDLRQQVHKAKDANIQGAMDTIAAAHMQ
SKTAELRANTSTSNPGNTVEGSATVRKATEDKLSSAQKEFDRKHQRNSQKLDKLSTELDK
FDLSPLSKKTCGGAAEGDGCPGSPCGGLGCVGEDGAPQCGGEGCEGLVTTSQTALKSAKD
LDQDILTAMQEVDKLSRMVWEANNRANEAKVNALEVLIKSNRSKERVEQSNEQLRNLIKE
IRDLLTNEKADVSVIEAVANEVLALEMPTSTEKLKELTKEIREKVGTLTSVETILSQSAD
DIQAAETLLKQAKAASEEASNMKETADVVRAALVETERAQSIAMDAIQLAQNNTKSTLDL
LISVESETAMSELKLGNTTGRLVQLEREVGLLRQNNLEVDRLAKTADWTTDQARLNAEEA
QQEFDTEVKDKMVEVEDLVEDKGESVLQARRRADILQQEAKELLAQSSIKLQELGELESS
YEANQFILEAKAAELAELERTARRLLEEISHKVTLYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcataatccactttgtaacagctttggccctgtggtggcccgtcagggcgctg
ctgccagagttcggggatgtttgcaccaaaggcagctgctaccccgccacaggtgacctg
ctgatcggccgcgcgcacaggctcagcgtctcctccacctgcggcctcaagcggccggag
cgcttctgcatcgtcggacatctggaggacgagaagaaatgttttgtgtgcgactccagg
aagccgttcaacgagtacaacaaccaaggcagccacaccatcgagaacctggtcaccacc
ttcgcccacaaccgcctcaagacctggtggcagtcggagaacggtgtggagaatgtgacc
atccagctggacctggaggccgagtttcacttcacacaccttatcatgaccttcaggacg
tttcggccggctgccatgttgatcgagcggtccatggactttgggaaaacatggcaggtt
tatcgttactttgcctacgactgcgagtcatccttccccggcgtgccctccaggccgatg
gtcaaagtggacgaagttgtctgcgactcccattactcagacatcgaaccatccacagag
ggagaagtgatatttcgggtgctggaccccgtctttaagattgaggacccctacagcctg
aggatacagaacatgctgaagatcactaatctccgggtgaagttcaccaagctccacacg
ttgggtgacaacctgctggactcccgcgatgatgtgatagagaagtactactactccctc
tatgacatggttgtccgcggcaactgcttctgctatggtcacgcctcggagtgcgcccct
atggatggagcaacgtttgatgctgagggcatggtccatggccgttgcgcatgcaatcac
aacacagagggattaaactgtgagcgctgtcaagacttttaccatgatatgccttggaga
cctgcagagggacaaaacacccacgcctgcaagaagtgcgagtgtaatcttcactccaca
tcgtgtcacttcgacctggctgtgtacatgacgaccggcaacattagcggaggcgtgtgc
gacgactgtcaacacaacacgatgggccgacagtgcgagcagtgtgcacccttctacttc
cagcacccaaaccgagacctgagggaccccaacgtctgtgagccatgtaactgtgacccc
tccgggtctctgcagggcggactgtgtgactcgcacactgatgtggccgccgggatgatc
tcaggccagtgtcgctgcaaagccaatgtggagggcgaacgctgcgaccactgcagacag
ggacaccacggactgggacaggggcctcacggctgcctgtcttgtacctgtaacccgctg
ggaactctgcctggaggaaacccctgtgattcaaacacagggaggtgcttctgcaaacgc
ctcgtcgacggacataactgcgatcagtgtctgccgcagcactggggtctgtccaatgac
atggatggctgcagatcatgtgactgtgaccagggtggggctgtaaacaataactgtgag
cctcacacaggacagtgtgtgtgcagggagcacatgtttggacgacgctgcgatcaagtc
gagtccggcttctacttcatcgctctggatcactacacctacgaggctgaggacgccgag
catggacctggtgtgacggtggtaccgaggccttaccctctggatcgcagtccgacatgg
accggtatgggttttgttaatgtgccagaaggagcttacttagagttcaccattaacaac
atcccagagtccatggactatgacatccttattcgctatgagccgcagctgccagaccag
tgggagcaggtggacatccgagtgcagcgtcccctcttcaaccctccaaactactcctct
cactgcggcaactccatccagagtggagacgagcagtccatctctctttcacctggatcc
agacacgtgttgctggtgacgccggtgtgtttcgagcaaggactgaactacacgatccgt
ctcactctgcctctctactcgtcagtcagtgacgtccagagcccgtacacactcatcgac
tccttggtgctgatgccccgggtcagggagctggatatgttccatgggatcgatggtgac
ggagcgtgggatacgtttcagcgctaccggtgtctggagagcagccagagcgtcgtcaaa
agccccctgactgacatctgtagcgactatatcttcagcgtctctgctctgctccacaaa
ggagccatggcatgccagtgtgaccctcagggttcactaagcgctgtgtgtgagcccagt
ggaggtcagtgcaggtgtcgatccaacgtggttggcaggaactgcgaccactgtgccccg
gctacgtttctcttcagccccagcggctgcaggtcttgcgactgtgaccctcggggttcg
atcagcgccttctgccacgaggcgacaggccagtgtgagtgtgtccctggggccacaggg
cgccagtgttcccactgcctgcccggcttctggggcttccctcagtgtagaccgtgccag
tgtaacggccacagcgagtactgccaccctcagactggagagtgtcaaggctgcagagac
tttaccactggacaccactgtgagaggtgtttggacagttaccatggcaacccagagttg
ggttcaggtggccactgccgcccctgtatgtgccccgatggaccgcgcagtggacggcag
ttttctgacagctgttaccttgtggctaatagtaaccagctggtgtgtgtgtgcagccct
ggctacaaaggtgccaggtgtgatgagtgtgctcccggttactttgggaaccctctggtg
cccggtgggcgctgcatgccctgccagtgtaacagcaacatcgacatgcacgacccaggg
tcctgtgacgctcggacgggcgcctgtctcaaatgcctgtaccacactgagggctacggg
tgtcagcactgcaaacagggttactacggcaacgctggcactcagagctgcaggaagtgt
atgtgttactcggcgggcacatcacctcaggcctgttcctcccctgatgagtgtcagtgt
aatcagcacagcggccagtgtccctgccagcctaacgtggtcggtcagaactgcgaccgc
tgtgctgttgatacgtggaacatcgccagcaggacgggctgccagcgctgcgactgccac
cccgtccactcttctggatcctcctgcaatgaggtcacaggacagtgcttgtgcaaaccc
ggttttggtggcaagacgtgtcgggagtgcagagagctcttctggggggatccagaggtc
aaatgtcatgcttgtgactgcgactctcggggaatctccagcaatcagtgccatcgtgcg
acaggtcagtgtacttgtgcgaagggcgtgtccggccgacgctgtgacgagtgtgccaga
ggctacatgggtgagttccccacctgtgaaccctgccaccagtgctttgctgtctgggac
accgtggtgggcgagctgaccaatcaaacccaacgtctggaggcccaagtaacacagctg
cagaccagcggggtgacagcgccatataaagacctggtcggcagcctggagagaaacgcc
aaagctgtcagagaaatagtagagaacaaccctgctgcagtgaagctggagaagattcag
gacctgatgcatcagattaccggtgtgatgtcctacctacacggaaagctgaacacgaca
gaggagaacttgaacgttctccacagtgatgccaacgccaccgacgcagacttggacgca
ctgactgccgaggccaaccagctggagctgagtgtccaggacttgagacagcaggttcac
aaagcaaaggacgccaacatccagggtgccatggacaccattgcagctgcacacatgcag
tctaagacggcagagctccgcgccaacacctccaccagtaatcccggaaacacagtggag
gggtcggccacagtacggaaagccacggaggacaaactgagcagcgctcagaaggagttt
gaccgcaagcaccaaagaaactcgcagaagctggataaactgtccactgagctggacaaa
tttgacctgtcaccacttagcaagaagacatgtggtggtgcagctgaaggggacggctgc
cctggctccccctgcggtggtttgggttgtgtcggtgaggacggagcgcctcagtgtggc
ggagaaggatgcgaaggcctcgtcacgacctcccaaactgctctcaaatcagccaaagac
ctggaccaggatatcctcacagcaatgcaggaggtggacaagctctccaggatggtgtgg
gaagccaacaaccgcgcaaacgaagccaaggtgaacgctttggaggtgctgatcaaatcc
aaccggagcaaagagagagtggagcagagcaacgagcagctccgcaacctcatcaaagag
atacgagacctgctcaccaatgagaaggcagatgtgtcagtgatcgaggcggtggccaac
gaggtgttggctctggagatgccgacctcgacagaaaagctgaaggagctgacgaaggag
atcagggagaaggtgggcactctgaccagcgtggagaccatcctcagtcagagtgctgac
gacatccaggctgcagagacgctgctgaaacaggccaaggctgccagtgaagaggcgtct
aacatgaaggagacagcagatgtagtgagagcagccctggttgagactgagcgtgctcag
agtatcgccatggacgccatccaactggcccagaacaacacaaagagtactctggacctg
ctgatctctgtggagtcggagacggcgatgtcggagctgaagctcggtaacaccacgggg
cgtctggttcagctggaaagggaggtcggcctgctgagacagaacaacctggaggtggac
cgcctggcgaagacggccgactggaccaccgaccaggccagactgaacgccgaggaggcc
cagcaggagtttgacacggaggtgaaagataaaatggttgaggtggaggacctggtggag
gataaaggggaatcggtgctgcaggcgaggagaagagcagacatactgcagcaggaggcc
aaagagctgctcgcccagagcagcatcaagctgcaggaactcggagagttggagagttcc
tacgaggccaaccagttcatcctggaggcaaaagctgcagagctggccgagttggagcga
accgcccgtaggctcctagaggaaatcagccacaaagtgacgctgtacagcacctgtctg
tga
DBGET
integrated database retrieval system