Sander lucioperca (pikeperch): 116060131
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Entry
116060131 CDS
T07345
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116060131 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sluc04030
]
116060131 (smo)
G protein-coupled receptors [BR:
sluc04030
]
Frizzled / Smoothened family
116060131 (smo)
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
DUF6312
Motif
Other DBs
NCBI-GeneID:
116060131
NCBI-ProteinID:
XP_031169423
Ensembl:
ENSSLUG00000025728
UniProt:
A0A8D0DEY1
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Position
20:complement(10670917..10680405)
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AA seq
819 aa
AA seq
DB search
MSSQGRGPIVGFYGMLCVWAAWLSGSRAVLSPNGTIFEDNCKKTSTCEALKYNTCLGSPL
PYTHTSLILAEDSSTQEEAFEKLTMWSGLRNAPRCWSVIQPLLCAVYMPKCENGRVELPS
QSLCLATRRPCSIVDQERGWPSFLKCDKFPVGCSNEVQKLKFNMSGQCEAPLVKTDIQSS
WYKDVEGCGIQCDNPLFTEEEHSDMHAYIAYFGTITLLCTFFTLATFLADWKNSNRYPAV
ILFYINACFFVGSIGWLAQFLDGARDEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSL
MSGVIWFVMLTYAWHTSFKALGTTHQPLSGRTSYFHMVTWSVPFVLTVAILAIAEVDGDS
VSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKI
NETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIASQTNKPIP
ECIIKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKIIGRSDNEPKRIKK
SKMIAKAFALRKELHKDPEKELSFSMHTVSHDGPVAGINFELNEPSNDVSSAWAQHVTKM
VARRGAILPQDISVTPTGTPVPPPEERNRLWMVEAEISPEMIKRKKKKKKRKKEVRPVDE
AVDHQANRQREFGRSSVPRLPKLPCHPSLVANLREQQRQQQKLEEEVLPGSYPDFQPSHP
LSCEERCPYQPYQSSRNSYGRSLLSNPLTFNDRPEDLGLGPRCLPSASTWQPRGSSRYPG
EMDLAHMARVPAGRRAGYGPVHSRTNLMEAELMDADSDF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccagggtcggggccccattgttggattttacgggatgctttgcgtctgggct
gcctggctttcaggctccagggcggtgttgtctccaaacgggacgatatttgaggataac
tgcaagaaaacctcaacttgcgaggcacttaaatacaacacatgtctgggatcgccttta
ccgtacacgcatacttctctgatcctggcggaggactccagcacccaagaagaagctttt
gagaagctgaccatgtggtccggtctgcggaacgctcctcgctgttggtcggtcatccag
cctttgctctgtgccgtctacatgcccaaatgtgagaacggtcgagtcgagctgcccagc
cagagcctgtgtttggctacacgtcgaccatgtagcatcgtggaccaggagagaggctgg
cccagcttcctcaaatgtgacaaattccctgtgggctgttcgaatgaggtgcagaagctg
aagttcaacatgtcaggccagtgtgaagctcccctggtgaagacagacattcagtccagt
tggtacaaggacgtggagggctgcggtatccagtgtgacaaccctctattcactgaggag
gagcacagtgacatgcacgcctacatcgcttacttcggcaccatcaccctcctctgtacc
ttcttcaccctggccacgtttcttgctgactggaagaactccaatcgctacccagctgtc
attctcttctacatcaacgcctgtttctttgtgggcagtattggctggctggcccagttc
ctggatggagcgcgcgacgagattgtgtgcaagagcgacaacaccatgcgactcggggaa
ccctcgtcttcagagacactgtcatgcgtcaccatcttcatcatcgtgtactactccctg
atgtcgggcgtgatttggttcgtcatgctgacctatgcctggcacacgtccttcaaagcc
ctgggcaccacccaccagccgctgtctggcagaacctcctacttccacatggtgacctgg
tccgtccccttcgtcctcactgtggccatcctggctatcgctgaggtggatggagactca
gtgagtgggatctgttttgtaggctacaaaaactacagataccgtgctgggtttgtgctg
gcccccattggagtggtgcttgttgtcggcggctacttcctcattcggggtgtcatgact
ttgttttccattaagagtaaccacccaggacttctgagtgaaaaagctgccagcaaaatc
aacgagacgatgctgagacttggtatatttggattccttgcttttggctttgttttcatc
accttcggctgccacttctacgacttcttcaaccaggccgaatgggagaggagcttcaga
gaatatgtgctgtgtgaagccaacgtgacaattgcctctcagaccaacaagccaatccca
gaatgcatcattaagaaccggcccagcctgatggtggagaaaatcaacctgttctccatg
tttgggacgggaatcgctatgagtacctgggtgtggaccaaggccaccatcctcatctgg
aaacggacctggtgcaagattattggtcgtagtgacaatgaacccaagaggatcaagaag
agcaagatgattgccaaggcatttgcactgaggaaggagcttcacaaggacccagaaaag
gagctgtccttcagcatgcacaccgtgtcccacgatggaccagtggctggaatcaatttt
gaactaaatgagccatcaaacgacgtgtcatcagcttgggcgcagcatgtgactaagatg
gtggcccggcgaggtgccatcctgcctcaggacatctctgttactcctactggtactcca
gtgccacctccagaggagaggaacaggctgtggatggtggaggctgagatttcaccagag
atgataaagaggaaaaagaagaagaaaaagaggaaaaaggaggtgcgtccagtggatgag
gcggtggaccaccaggctaatcgccagcgtgagtttggtcgcagctcagtgcctcgtctg
cccaaactgccatgccaccccagtctggtcgctaatctgcgcgaacagcagaggcagcag
cagaagctggaggaggaagtcttgccagggtcctacccagatttccaaccctcccacccc
ctgtcctgtgaggagaggtgtccctaccagccctaccagagcagtcggaacagctatggc
cgcagcctgctctctaaccctctaaccttcaatgaccgcccagaggatcttggtctcggc
ccacgctgcctcccctctgcctccacttggcagcccaggggatcttcccgctaccccggg
gagatggatctcgcccacatggctcgggtaccggcaggccgaagggccggctacggaccc
gttcactcccggaccaatttaatggaagcggaacttatggatgctgactctgacttctaa
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