Sander lucioperca (pikeperch): 116060172
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Entry
116060172 CDS
T07345
Symbol
epyc
Name
(RefSeq) epiphycan isoform X1
KO
K08127
epiphycan
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sluc00535
]
116060172 (epyc)
Proteoglycans [BR:
sluc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
116060172 (epyc)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
116060172
NCBI-ProteinID:
XP_031169473
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Position
20:complement(8278375..8294253)
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AA seq
634 aa
AA seq
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MRMLVQLVFGLFVLKAAVAGPRFSRQVDLDTYDSANYDVDLDNLNSENQDNYDYEDGLTI
DDPQIEIGTLAPPDYNYPVPEASLEEQVEQEEEEEEEELPLTPQLTPQGSGGSGVLMGPD
TQKEVELRLTPIDILHVSGDFGGSVGSGASGASGASGSGGSGDLLFSGGSGSSGDIVLIS
GASEELLSSGGSGEFLVSGDLLISGDLSGSGDLSGSGDLLISGDLSGSGDLLISGDLSGS
GDTSGASGDTSGASGDTSGVSGDTSGASGDTSGASGDLGSGISIELPLGSGGSGDQSGSG
FSGDLLISGASGSSGESGDSGITLLSGEEELPLIPETTPSEASGASGEFSGASGTSGFSG
SSGASGVSGSGDAEVPEVTLIPDTDKEEGLLPTTPETPQEGTGGVEGSVSSGEPDEPDEP
VIDREGMPTCLLCTCLGGSVYCDDLKLDSVPPLPKDTTHFYARYNRITKINKSDFAFMSK
LKKIDLTANEITSIDEKAFMGLPELEELVIRENHISQLPALPETMSLIDASHNNIGTKGI
HKEAFKDMTSLLYLYLTDNHIDYIPVPLPDSLRSLHLQRNNIQMMHEDTFCNLKDFNYIR
NALEDIRLDGNPINLSRTPQAYVCLPRIPIGDLI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgcttgtgcagctcgtttttggactcttcgtccttaaagcggcggtggctggc
cccagattttcccgacaagtggacttggacacatacgacagcgccaactatgatgtagat
ctagacaatttaaattcggagaaccaggataactatgactatgaagatgggctgacaatt
gatgatcctcagatagagattggaacactggccccacctgactataactaccctgtacct
gaggcctcgttggaagaacaagtagaacaagaggaggaagaggaggaggaagagttgccc
ctaacaccccagctcacgcctcagggttcagggggttctggggttctcatgggcccagac
acacagaaagaggtggagctgcgtctgacgcccattgacatccttcatgtgtccggggat
tttgggggctccgtagggtctggggcctctggagcttctggggcttctgggtctggaggc
tcaggagacctactgttctccggcggctctgggagttctggtgatattgtcctgatctcc
ggagcctctgaggagcttctcagctctgggggatctggggaattcttggtatctggggat
ctcttgatatctggggatctgtcaggatccggggatctctcaggatccggggatctcttg
atatctggggatctctcaggatccggggatctcttgatatctggggatctctcaggatcc
ggggatacttctggagcctctggggatacttctggagcctccggggatacttctggagtc
tctggggatacttctggagcttcaggggatacttctggagcttctggggaccttggctct
ggtatttccattgaattgcccctgggctctggaggatctggggaccagtctggttccggg
ttctccggagatcttttgatctcaggggcctccggaagctctggtgagtccggtgactca
gggataacattgttatctggagaggaggagctgcccctcattcccgagactacccctagc
gaggcatcgggtgcttcaggggagttctcaggagcgtcaggaacctcagggttctctgga
tcttctggggcttctggtgtctctggctctggagatgcagaggtccctgaggtaacgctg
atccctgacactgataaagaggaggggctgcttccgactacaccagaaacccctcaggag
ggtactggcggtgtagaagggtcagtgagctctggtgaacctgacgagcccgatgagcct
gtgattgacagggaaggtatgcccacttgcttgctgtgcacgtgcctcggtggttcggtc
tactgtgatgacttgaagctggatagtgttccacctcttcccaaagacaccactcacttc
tacgcccgctacaacagaatcaccaagatcaacaagtccgactttgccttcatgagcaag
ctgaaaaagattgacttaaccgccaacgagataacgtccatcgatgagaaagcatttatg
ggtctgcctgagctggaggagctggtgattcgagaaaatcatatctcacagctgcctgcc
ctcccagagaccatgagcctgatcgatgccagccataacaatattggcaccaagggtatt
cacaaagaggcattcaaagatatgactagcctgctgtacctgtacctaacagacaaccat
attgattacatccccgtgcctctaccagacagcctgcgatctctacacctacagcgtaac
aatattcaaatgatgcacgaggacacattctgcaacctgaaagatttcaactacatcagg
aatgcactggaggacatccgtctggacggcaaccccatcaaccttagcaggaccccacag
gcttacgtctgcctgccccgtatacccatcggggatctcatttaa
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