Sander lucioperca (pikeperch): 116060322
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Entry
116060322 CDS
T07345
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116060322 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116060322 (trim54)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116060322 (trim54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_2
Sina_RING
Prok-RING_4
SMBP
Med25
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
116060322
NCBI-ProteinID:
XP_031169693
Ensembl:
ENSSLUG00000023686
UniProt:
A0A8D0AJC8
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All DBs
Position
19:complement(6158617..6172701)
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AA seq
357 aa
AA seq
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MNFALRPPSAGSSGPGAGRGATMENLEKQLICPVCLEMFSKPVVILPCQHNLCRKCANDI
FQSANPLWQSRGSSSMASSGTRFRCPACRHEVVLDRHGVFGLQRNLLVENIIDIYRQQES
SRLVNIKPEQQKQQLLCEEHEEEKINIYCLSCETPTCSMCKVFGKHKDCEVAPLSSVYMR
QKTDLSDGIAILVASNDHVQAVISQMEEICCTVEENGQRQREQLALRFDSLLAILDERKQ
ELVGLITKQQDDKLKRVQSLIRQHSDHLEAAVTLVESAIQSMEEPHMPVFIQSAKVILEK
IAVTARASNMERPELGYESMSHFFIDTDDLADMLRNINFCSGVGDNGEEDPEEGGEE
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgctctcaggcctccatcagcaggcagttctgggcccggcgctggcagagga
gccaccatggagaacctggagaagcagctgatctgcccggtgtgcctggagatgttctcc
aaacccgtggtcatcctgccctgccagcacaacctctgccgcaagtgtgccaacgacatc
tttcagtcagcgaaccctctgtggcagtcccgtggctcctccagcatggcttccagtggc
actcgcttccgctgtccggcgtgccgccatgaggtggtgctggaccgccacggggtcttc
ggtctgcagaggaacctgctggtggagaacatcatagacatctacagacagcaggagtcc
tccaggcttgtgaacatcaagccagagcagcagaagcagcagctgctgtgtgaagaacat
gaagaggagaagatcaatatctactgcctgtcctgtgagacgccgacctgctccatgtgc
aaggtgttcggaaaacacaaagactgtgaggtcgcaccgctcagcagcgtttatatgaga
cagaagacagacctgagcgatggcattgccatcttggtcgccagcaacgaccacgtccag
gcagtcatctctcagatggaagaaatctgctgtactgtagaggagaacggtcagcgacag
agagaacagctagccctccgtttcgacagcctgttagccatcttggacgagcggaagcag
gaactggtggggctcatcaccaaacaacaggacgataaactcaaacgtgttcaatctctc
attcgtcagcacagcgatcacctggaggccgcggtaacactggtggagtcggccattcag
tcgatggaagagccacacatgcctgtgtttatacagagcgccaaagtcatactggaaaag
atagcagtgacagccagggcctcgaacatggagcgtccagagctcggttacgagagtatg
agccatttcttcatcgatactgacgatctcgctgacatgctgaggaacatcaacttctgc
tccggtgtgggagataatggagaagaagatcctgaagaaggtggcgaagagtga
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integrated database retrieval system
