Sander lucioperca (pikeperch): 116060346
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Entry
116060346 CDS
T07345
Symbol
si:dkey-24p1.1
Name
(RefSeq) hemicentin-1 isoform X1
KO
K06467
CD22 antigen
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116060346 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116060346 (si:dkey-24p1.1)
04090 CD molecules [BR:
sluc04090
]
116060346 (si:dkey-24p1.1)
04091 Lectins [BR:
sluc04091
]
116060346 (si:dkey-24p1.1)
Cell adhesion molecules [BR:
sluc04515
]
Immunoglobulin superfamily
SIGLEC family
116060346 (si:dkey-24p1.1)
CD molecules [BR:
sluc04090
]
Proteins
116060346 (si:dkey-24p1.1)
Lectins [BR:
sluc04091
]
I-type lectins (Siglecs)
116060346 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
Ig_CD22
ig
V-set
Ig_4
Ig_5
Ig_C17orf99
C2-set_2
C1-set
PKD_3
Orf78
Pam3_gp18
SMIM43
ODV-E18
Chisel
RIFIN
RCR
Motif
Other DBs
NCBI-GeneID:
116060346
NCBI-ProteinID:
XP_031169732
Ensembl:
ENSSLUG00000009559
LinkDB
All DBs
Position
10:15189444..15208601
Genome browser
AA seq
1025 aa
AA seq
DB search
MKMNALAVGWLVFLALIKNFSCAPQNPFTLKGPLTATEGSCIEIKCNVTNNVEPKDAYWF
WIKNPHWSVNDFTGTIIYSTNETVRPVSSDFADRVKYTGSPSLSWNNRPRSPPVLCSILI
CNLNKTDSGNYAFRFVGTKVWKTEDANLKVIENPCPITFEKPAAVNESGMITLTCSTSSS
CTSKLQIGGLTQLSPTPQQRNNEKTKSTTVTLTVNWNDDGKEFSCKTQDNEDKYLIKNIS
VTVEYAPKYTLAEISSQNVEEGRSVTLTCSAKGSPTPTFTWVKNKQDAVVKTGAEWMITS
ITESQDGEYHCKAANKHGTTQSNPVTIEVQYRPEIEVKSSASVVKEGEIMTLTCKVKRSN
PPPSTYSWFKDEKAIHQEQTHQYVVERIQPEDRGSYTCSATNTVGTGTSGSLLITVEYGP
WNTTIRNVDKKVKVGSSLAFYCFTDANPAPLSYSWYRYNMKKPTDSSKWRSKNSKEEVIY
LDRVERADEACYMCNATNEISTGHDSEPVCIEVLYPPTEPMLTMDTELREDQLITISCTV
ESFPLSTLYLTRTSESKPQSSELLFTQLWPDNTLHHKFNVTSTHTGVYTCSATNSEGSKT
SKPTTLVVKYRPKDVTVKAEPALIVNENKSLTLRCSAQSHPPVTSVTWMKTTDGKSEIIR
KGLTFILKSVSPSDSGLYSCAANNGIGTGNSQKAEVKVKYAPKHTNITRAAEQQQPDGTR
SVELSCSSHSYPPVTQYSWYKIKAEEGDEKVSNHQTYTVYSNEPGSYYCIAKNEINQRKS
DPVHLFDRTLMKVLYIFLFLIILFIIILIFFVYRHRRKKSIQQGTMNTATGLGFLGWWND
ARRRNRMNNPSMAGPFRSRDDLLSDQPCHPNGQRCQPRLDSTPTSNVNSVYCTVNLPSGK
QGPSAQKPIRQQGGHTQDYSLNYASLHFGNTQKHNPTKAEDEYSMVSKQKPLKKNDERLE
DYENVSAAHTAKSQNASNYDTDTSEDEIEINYSQVSFKAKPGLQRAGRDSSSSDEEVTQY
SEVKI
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaatgctctggcagtcgggtggttggtatttctggccctaataaaaaatttt
tcttgtgccccacaaaaccccttcacactaaaaggtcccctgacagccacagaagggtcc
tgcattgaaatcaaatgcaacgtcacaaataatgttgaacctaaggatgcatactggttt
tggataaagaatccacattggtctgtaaatgatttcactggcactatcatttacagcaca
aatgaaacagtgcgtcctgtcagttcagactttgcagatagagttaaatataccggctct
ccatctttaagttggaacaatcgtcctcgatctccaccagtgctgtgcagtattttaatc
tgcaacctaaacaaaactgacagtggaaactacgctttcagatttgtaggaacaaaggta
tggaaaactgaagacgcgaacctcaaagttatagaaaatccatgcccgatcacttttgag
aaacccgcagctgtaaacgaatctggcatgataacactcacatgctccacttcaagttca
tgtacttcaaagctacaaattggaggtttgacacagctgtccccaacacctcaacaaaga
aacaatgaaaaaacgaaaagcacgaccgtcactctgacagtcaactggaatgacgatggg
aaggagttttcatgcaaaacacaagataatgaagacaaatatttgattaaaaatatcagt
gtaactgttgaatatgctcccaaatacaccttggctgaaataagctctcaaaacgttgag
gaaggacgatctgtaactcttacttgctccgctaaaggaagtcctacccccacctttacc
tgggttaaaaataaacaagacgctgtagtgaaaacaggggcagaatggatgatcacatca
attacagagtcacaggatggagaataccattgtaaagctgcaaacaaacatgggacaaca
caatcaaacccagtcactattgaagttcaatatcggcccgaaattgaagtgaagtcctct
gcttctgtagttaaagaaggggaaattatgactttgacatgtaaggtgaagagaagcaac
ccaccacctagcacctactcttggtttaaagatgagaaagctattcatcaggaacaaaca
caccaatatgttgttgaaagaatccagcctgaggacaggggctcgtacacatgtagtgcc
accaacactgtgggtactggaacatcagggtcacttctaattacagttgaatatggcccg
tggaacacaaccatccgtaatgttgataaaaaagtgaaagttggtagctcccttgcattt
tattgtttcactgacgccaaccctgccccgttgagttactcctggtaccgttacaacatg
aagaaaccgactgactcctcaaagtggaggtctaagaattctaaagaagaagtgatatat
ttggacagagtagagagagccgatgaagcatgttacatgtgcaacgcaaccaacgagatc
agtacaggacacgatagtgagccggtgtgcatagaagtactctatcctccaactgaaccc
atgctgactatggatactgagctcagggaagatcagctcatcaccatcagctgcactgtt
gaaagcttcccactgtcaacgctctacttgacaaggacttccgaatccaaacctcagtcc
tcagaattgcttttcactcaactttggcctgataacactctccaccacaaattcaatgta
acttcaactcacacaggagtttacacctgcagcgccacaaacagcgaaggttcaaagaca
agcaaaccaacaacactggtggttaaatatcgtcccaaagacgtgactgtaaaagctgag
cctgctctcatcgtgaatgaaaacaagtcattgacgttacgttgcagtgcccagtcccac
ccaccagtgacctccgtcacctggatgaagacgactgatgggaagagtgaaatcatccgg
aaagggctgactttcattctgaagtcggtcagtccttctgacagcggactgtacagctgt
gcagccaataatggtattggaactggaaactcacagaaggctgaggtcaaagtcaagtat
gctccaaaacacaccaatatcacgagagcagcagagcagcagcagcctgacggaacgaga
tctgtcgagctgagctgcagcagtcacagctatcccccagtcacacaatattcatggtac
aagataaaggctgaggaaggggatgaaaaagtgtctaaccatcagacctacacagtgtat
tcaaacgagccgggaagctactactgcatcgcaaaaaatgaaataaatcaaagaaagtct
gacccagtccatctgtttgaccgaacattgatgaaggtcctgtacatctttctttttctt
attatcctgttcataatcattttgattttctttgtctacagacacaggaggaagaaatca
attcaacaaggaactatgaacacagcgaccggtttggggtttctgggttggtggaatgac
gccaggaggagaaatcggatgaacaaccccagtatggcaggacctttcaggagcagagat
gacctcttgtcagaccagccgtgccatccaaatggccaacgatgccagcctcgtctagac
agcacccctacatccaacgtcaacagtgtttactgtactgtgaatctgccctccggaaaa
caaggtccttctgcacaaaagccaatcagacagcaaggtggacacacacaggattattct
ctcaactacgcttctttacactttggaaatacgcaaaagcacaatcctacaaaagcggaa
gatgagtattctatggtgtccaagcaaaagccacttaaaaagaatgatgaaaggctggag
gactatgagaacgtcagcgcagcacacacagccaaatctcaaaatgcatcgaactatgac
acagacaccagtgaggatgaaatagagatcaattattcacaggtgagcttcaaggcaaag
cctggacttcagagagccggcagagactccagcagctctgatgaagaggtgacacagtac
tctgaggtcaaaatctga
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