Sander lucioperca (pikeperch): 116060348
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Entry
116060348 CDS
T07345
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X5
KO
K09291
nucleoprotein TPR
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116060348 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116060348 (tprb)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116060348 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
DUF7491
Motif
Other DBs
NCBI-GeneID:
116060348
NCBI-ProteinID:
XP_031169730
Ensembl:
ENSSLUG00000019733
LinkDB
All DBs
Position
11:11839439..11867479
Genome browser
AA seq
2357 aa
AA seq
DB search
MAALLLQELEGSEISKLPKTIQNKLEKIFSDQQYEIDYLKAQQEQFRVDSEQHFFEKVKQ
LAQCQEEFVSQTQEHLKLKEEFTKQEEDLKSVRQKNKEYESAQERLSSEQTLLSKAKEEL
EAEKRELVRTLERRSLEVEHLNDDFRQLNDKLVEVNTSKMALQMKLDELESAEVNIKYKE
KRMEQEKELLNGQTSWLNEELKAKSEELLSLSRQKGNEILELKCNLENKEDELNGLQDQV
ASLKTSNEHLQKQNEDMISKLKEAKEQQATMEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSGAVEELHKLLKDAGEANKALEEKLQEMNGATDRSVAELKERIQGLEKELDNAYELL
SSSKLRGPAGTSMLAEEQMTTMSPTAAAVSKIKPGMKLTELYSAYVESQEQLQLERLENK
RVNKYLDDIVQEVEAKAPILKRQRDEHERLQKSVASLSAKLEQAVMEVHRLQKDADEANK
RSSVLERDNQRCELQLGDMAQQVRVLLIELEEARGNHVVHDEEVSSADVSSTSEVISQHL
VTFRGVEELQKQNQRLLVALRELSDAQEKEEFEATGNKRGELEQSLEKAKVELESLKEQR
GQQIKMTESIVRQRDMYRMLLAQATGVSFPQQGTPPEEFSLASTPRRSPAAIPTPGTPTA
LVSMATESAEALEAKAALRQLQEVFSTYKKEHMESTKALTEQNEKLQDQISDLHSQNAKI
STQLEFASKRYEMLQDNVERYRKEIASLREKGQNMAAASQKHEQTIHTLNEDLKAAKEKL
TMAEGHAETLRKERDMLKLVESRLNQEKESIMSQQQSQSLLLTNLQAIQATLERSETDTR
QRLNSQLEKQEREISQLQKRLEHEVEQRHLLSRNQEIQLLEAKRQLELQLPLHQKTKELL
NAAELELNTLRLQLGSSEPRHTLSSPTMPIIRGLPGSDQDREDLQCRLRLAETRAEELAE
GLRAATSSMEQYRAMAQSLEESLDKEKQVTEQARSSIEARIMEAEKQHRRLEEKLLEAEK
DKDNLEEQKRRALASLEEQMNSLRNSLSSAQADHQVVLQQLAVAEAQQQQALQDSQEQAK
MAAEAQDKYEREMMLHAADVEALQAAKAQALQAVGLRHQLDERAQRVSAELLEARVSWGE
QEKIIKEEMSKMESRYEELQRQNTLLHEQIQTMSSKMADKLQHAASESPMNISLTEEGKS
QDQVLEILRFVRREKEIAESRFEIAQGESLRYRLRVEHLERELKEMQDSLSAAKERMQVT
AKTLSQHDELMKKTETMSILMETNKMLREEKDKTEQELQQTQAKVQKLESDIMPLQQANS
ELSEKSGMLQAEKKLLEEEIKRWKARTQHLVTQQKDSDPEKEAHLKRILQLTEDGTRLKA
EVLRSNNLTTSLQSQIQNLRDNVSKITDERNNLRREVETKNQELQEKWRTITQVKKIGRR
YKTQYDELKVEHDKLVAEAAAGPSQEEEARQASVQELQSLRDSLNQAEAKTRELEGQLEN
INKVVTERETEGRNAQEQSSRLQAELTRLRQELQDKASQEDTLRQQMTEKEEKTRKAIVY
AKQKINQLTSTKDQLQKENEELKQQREELEVRVSALKSQYEGRLSRQERELRDLRGQQER
QEQRDEPPEAGPSKTQEQQRGTEQRQISLKTTPAADRGSASTSEPPTANIKPTPVATGSK
QPVNPGNKPTPRASIRPMITPATVPTPTPTATVMPTTQVETQEAMQSTEGPPVEHVTVYG
SASGSVRSASPNVQTTLASPMLTVQQTQTQATAFVQPTQQQSMSHAEPANQEPSPVVIEA
TPSSQAEWPSTSSTSSVFGTVSATPGTSSMSKRPREEEESATMVTDTESTQEDTSRAPIP
KKLRIIQRVGPEEEVLVEDSAEAEGVAPTDSQDGAEASQTEEFPVLEEGDEGAASQSVTM
DQEVSLTQSDTPEQLQHEVIVIVTDTESEDDQEEEDEEEEDQDYDEEEEEEEEEEEDEED
EEEDDGEMGEEGEDSNEGSGDGNEAYEGDDTEGADVTDPGTETEESLGASDSTQRPADSQ
THSFEGSTMEMYTTEQPITSSGIRMPQSPRRPTHQLPPRLNIAPTSELGPPVQVQRMPVR
RQSVGRVPQLTPAVTGSSQHFFDDDDRMVPSTPTLVVPHRSDGFDQAIHSPQVAGVPRFR
FGLSDDMPQTSSSSHSDLGQLSSQGGLGMYESPSFLATHEEESGGRSVPTTPSQVAAPVT
IFSEVAQSDTAEHSSQSVPMVSTSTPGLPAAATTGEDRDDAFLEPDTDRSSGEVSVDPVV
SQGDIEEPGQQSDKASLPSTSQEPSSSSADTSSAPPKPSRLGHNRQLQRWPEHRGGRMKR
GGQGFPSRGVHGRRFAR
NT seq
7074 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgctgcaagagttggaaggttccgagatatctaagctaccaaaaaca
attcaaaataaactcgagaagattttttcggatcagcagtatgaaatcgattatttgaaa
gcacaacaggaacaatttcgggttgacagcgagcaacacttctttgaaaaagttaaacaa
cttgctcagtgtcaggaagaatttgtgtcccagactcaagaacatcttaaactgaaagag
gagtttactaagcaagaggaggatcttaaaagtgtgcgtcagaaaaacaaggaatatgaa
tccgcacaagagaggctatcttcagagcagactttgctgtcaaaagccaaagaggaactt
gaggcagaaaagcgagaacttgtacgaacacttgaaaggagatccttggaagtggagcat
ttaaatgatgacttccggcaactcaatgataagttggtggaggtcaacacctctaagatg
gccctgcagatgaaattggatgagcttgaatcagctgaagtcaacataaaatacaaggag
aagcgcatggaacaagagaaggagctgctgaatggccaaacatcttggctgaacgaggag
ttgaaggctaagagtgaggaactactgtccttgtcccgacagaagggaaacgagatcctg
gaactgaagtgcaacctggagaacaaggaagacgagttgaacggactccaagaccaagtg
gccagtttgaagacttcaaatgaacaccttcagaaacagaatgaggacatgatcagcaaa
ctaaaagaagccaaggaacagcaagctaccatggaggaaaagttcagaaacgagctgaat
gccaacatcaagctttccaatctatacaagggagcagcagcggattctgaggcaaaaagt
gaagagctgagtggggcagtggaggagctgcataagctgctgaaggatgctggagaagca
aacaaggcccttgaggagaagttgcaggagatgaacggtgccacagacagaagtgttgct
gagctaaaggagaggatccagggtctcgagaaagagctggacaatgcctatgagctgcta
tcaagttctaaacttagaggccctgctggtacttctatgcttgcagaagagcaaatgaca
acaatgtctccaacagcagctgctgtatccaagataaagcccgggatgaagctgacggag
ttgtacagtgcatatgtagagagccaggagcagttgcagttggagcgattggagaacaag
cgggtcaacaagtacctggatgacattgtgcaggaagtggaagcaaaagcccctatcctc
aaacggcagagggacgaacatgagcgcttgcagaagtcagtggccagtctttctgccaag
ctggagcaggctgttatggaggtgcaccgtctgcaaaaggatgctgatgaagctaacaag
cgctcctctgttctggaaagggacaaccagaggtgtgaactgcagctgggagacatggct
cagcaggtgcgcgtcctgctgatagagctggaagaggctcgtggaaaccatgtggttcat
gatgaggaggtgagctcagctgacgtcagcagcacatcggaggtgatcagccaacacttg
gtgaccttccgtggtgtagaggagctgcagaagcagaatcagcgtcttctggtggccctt
agggagctcagtgatgcccaggagaaagaggagtttgaggccactggcaacaaacgtggt
gaactggagcagagtttggagaaagccaaggttgagctggagtccctgaaggagcagcgc
gggcagcagattaagatgactgagtccatcgtaaggcagagggacatgtaccgcatgctg
cttgctcaggcaaccggagtcagcttccctcaacaaggtacaccacctgaagagttctcc
ctggcctccaccccccgacgctcacctgcagccattcccaccccaggaacacccactgca
cttgtctccatggcaacagagtctgctgaagccttggaggctaaggcagctttgcgacaa
ttgcaggaggtgttctccacctataagaaggaacatatggagagtacgaaggcactgacg
gagcagaacgagaagctccaagatcagatctctgaccttcattcccagaatgcaaagata
tccacccagctagagtttgcctcaaagaggtatgagatgctgcaggacaacgttgaacgc
tacaggaaagagattgcttccctcagagaaaaaggacagaatatggccgctgcctcacag
aagcatgagcagaccatccacactttgaatgaggatctgaaagctgccaaagagaaactt
accatggctgagggccatgctgagaccctgcgtaaggagagagacatgctgaagctggtg
gagtccaggctgaatcaggagaaagagtcaatcatgagccaacaacagagccagagcctg
ctgctgaccaacctccaggccattcaggccactcttgagcgttcagagactgatacacgt
cagcgtctaaacagccagttggagaagcaggaacgagagatctcccagctgcagaagagg
ctggagcacgaggtggaacagcgccacctgctcagcagaaaccaggaaatccagttgctg
gaggcaaagaggcagcttgagctacagctaccattacaccagaagaccaaggagttgctg
aatgctgccgagttggagcttaacacactccggctgcagttaggcagcagcgaaccacgt
cacaccctgagctcccccaccatgcccattatcagaggcctgccgggttcagatcaagac
agagaggacctacagtgccgcctgcggctggctgaaacccgggcagaagagctggcagag
ggcctcagggcagccacctccagcatggagcagtacagagccatggctcagagcctggag
gagtccctggataaagagaaacaggtaacggagcaggcacgctcatccattgaagctcgt
ataatggaggctgagaagcagcaccgtaggctggaggagaagcttctggaagcagagaaa
gacaaagacaatttagaggaacagaagaggagagccctggcctctctggaggaacagatg
aacagtctaaggaacagtctcagcagtgcccaggcagatcaccaggtggtgctacagcaa
ctggcagtagctgaagcccagcagcagcaagctctacaagacagccaggagcaagctaag
atggcagccgaagcacaagataagtatgagcgggagatgatgctgcatgcagctgacgtg
gaagccctgcaggctgctaaggctcaggccctgcaggctgttgggctcagacaccagctg
gatgagagagcccagagggtcagcgctgagctactggaggccagggtctcctggggggag
caggagaagatcatcaaggaagagatgtcgaagatggagagccgctatgaggagttgcag
aggcagaacaccctcctgcatgagcagatccagacgatgagcagcaagatggctgacaag
ttgcaacatgctgccagtgagagtcccatgaatatctccctcactgaggagggcaaatct
caagaccaagtccttgagattctcaggtttgtgcgacgggagaaggagatcgcagagtct
cgttttgagattgcccaaggggagagtttgcgttatcgtctgagggtggagcacctggaa
cgcgaactgaaggagatgcaggacagcttgagtgctgcaaaggagaggatgcaggtgaca
gcaaagaccttgtctcagcatgatgagctgatgaagaagacggaaactatgagcatcctg
atggagaccaacaagatgctgagagaggagaaggacaagacggagcaagaattgcagcaa
acccaagctaaggtacaaaagctggagtcagacatcatgccactgcagcaggccaactct
gagctgagtgagaagagcggcatgctgcaggcggagaagaagttattggaagaggagatc
aagcgctggaaagctcggacccagcatttggtgacccagcaaaaagattccgatccggag
aaggaggcccatctcaaacgcattctgcagctgactgaggatggcaccagacttaaagcg
gaggttctcaggagcaataatctaacgacatctctgcaaagccagatacagaacttgcgt
gacaatgttagtaagataactgatgagaggaataatctgaggagggaagtggagaccaag
aaccaggaactccaggagaagtggcgaactattacccaggtcaagaagattggacgccgc
tacaagactcagtatgatgaactcaaggtggaacacgacaagttggtagccgaggctgca
gcaggtccatcccaagaggaggaggctcgtcaagcctcggttcaggagctgcagagcctc
agagattctctgaaccaggccgaagccaagaccagagagctggaaggacagctggagaac
atcaacaaggttgttacagagcgcgagactgaagggcgtaatgcccaggaacagtcctcc
aggctgcaggcagagctgaccaggctgaggcaggagctgcaggataaagcttctcaggag
gacacgctgagacagcagatgactgagaaggaggagaagaccaggaaggccattgtttat
gccaagcagaagatcaaccagctcacgagcaccaaagaccagctgcagaaggaaaatgag
gagctaaagcaacagcgtgaggagctggaggtgcgggtgagcgctctcaagtctcaatac
gagggccgcctgagtcgacaggagagagagctgcgagacctgcgaggccaacaagagaga
caagagcagagagacgagccacctgaggcaggtcccagcaagacccaggaacagcagagg
ggcacagaacagagacagatcagtctgaagacgaccccagcggcagacaggggcagtgcc
agcacatctgagcctccaactgccaacattaagccaacacctgtggctacaggcagcaag
cagcctgtcaatccgggaaacaaacccactccgagagcaagcatcaggccaatgattacc
ccagctactgtacccaccccaacacccacagctactgtcatgcccaccacacaggtggag
acccaggaagccatgcagtctactgaaggcccaccagtggagcatgtcactgtgtacggc
agtgccagcggctcagtgcgctccgccagccccaacgtccagaccactttagcaagcccc
atgctgactgtgcagcagacccagacacaggccacagcatttgtccaacccactcagcaa
cagagcatgtcccatgcagagccagctaatcaggagccatcacctgtggtcattgaggca
acccctagctcacaggcggaatggccttcaacatcctccacttcctctgtgtttggcact
gtttcagcaacgccaggtacctcctccatgtctaagaggcctcgagaggaggaggaaagc
gccaccatggtcactgacacggagtccacccaggaggatacatctagggctcctatacct
aagaagctacgcatcatccaaagagtgggtccagaggaggaggtgctggtggaggacagt
gctgaggctgagggggtggcaccaacagacagtcaagacggtgcagaagcaagccagaca
gaggagtttccagtactggaggaaggagatgagggtgcagcctcccagtccgtcacgatg
gaccaagaggttagcctgacccaaagtgacacacctgaacagctgcagcacgaagtgatc
gtcatagtaacagacacagagagtgaggatgaccaggaagaggaggatgaagaggaagaa
gatcaggactacgatgaggaggaggaagaggaagaagaggaagaggaagatgaagaggat
gaggaggaagacgacggagagatgggggaggaaggagaggacagtaacgaggggagcgga
gatggcaacgaggcttacgaaggagacgacacagagggagctgatgtaacagacccgggc
acagagacagaggagagtttgggggcgtctgactccacccagaggccagcagattcccag
acacacagctttgagggcagtacaatggagatgtacactacagaacaacctatcacaagc
tctggtatacggatgccccagtcaccacggagaccaacacatcagcttcctcctcgcctg
aacattgccccgacatcagaactgggaccacctgttcaggtacagcgtatgcctgttcgt
cgtcagtcagtgggcagagtccctcagctcactcccgcggtgacgggcagttctcagcac
ttctttgatgatgatgacaggatggttcctagcactcccactctggtggtgccacaccgc
tcagatggttttgaccaggccattcattctccccaagtggccggtgtgcctcgcttcagg
tttggtctctcagacgacatgccacagaccagttcctcctcacactctgacctgggacag
ctctcgtcacaaggaggtcttgggatgtatgaaagcccctcgttcctagcaactcacgaa
gaggagtctggtggacgcagcgttcccaccacaccgtcacaagttgcagcaccagtaaca
atcttctcagaggtggcacagtctgacaccgctgagcactcctcccagtcggttcccatg
gtgagcacgtccacaccaggcctgccagcagcagccactacaggggaggatagagacgac
gccttcctggagccagacactgataggtccagtggagaagtgtcagtagatccagtggtc
tcgcagggagatatagaggagccaggccagcaatctgacaaggccagccttccctccacc
agtcaggagccctcctctagctctgcagatacaagcagtgctccacctaaaccctctaga
cttggacacaacagacagctgcagcgctggccagaacaccgcggcggccgcatgaagaga
ggaggtcagggatttccttctcgaggtgtgcatgggagacgatttgcgagatga
DBGET
integrated database retrieval system
