Sander lucioperca (pikeperch): 116060454
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Entry
116060454 CDS
T07345
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1-like isoform X1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116060454
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116060454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
BIG2_C
MYO6_lever
IQ
Motif
Other DBs
NCBI-GeneID:
116060454
NCBI-ProteinID:
XP_031169874
Ensembl:
ENSSLUG00000015283
LinkDB
All DBs
Position
3:14106237..14137468
Genome browser
AA seq
1257 aa
AA seq
DB search
MQKGLRLNDGHITYLALLAKKDGTRRGCLSKKSSDNTKWHSKWFALLQNMLFYFENDSSS
RPSGLYLLEGCVCDRAPSPKPSLSAKECLEKQYYFTVTFNHDNQKALELRTEDVKDCDEW
VAAIIQASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAG
LLKDNEKIQSNPEVPPSEDDTEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHITKNGVVSLIDCTLMEEPEGTDDESKGER
SGQDTEHLDFKVMVEPKDVQPYTIILVASSRQEKTAWTSDISQCIDNIRCNGLMMNAFEE
NSKVSVPQMIKSDTSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTSADVVLDKLITIYKKPISAIPARSLELFFASSQSNKLLYGEPPTSPRVS
RKFSSPPPLSITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSPNGYASMHSTMSPFSK
TTLDINKLYVTSTVASKIPDEGETKAEGKAEESVLNKQDLCVREECDGEPSQSDEAEAEM
SPPKSPSTPKNVKSKNSEFSLFSFNNGMVVSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFELNTELKM
RVIGFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQVTLEEITQMAMEDCKTEPFES
HSALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNERTPYIMKTTKHFNDISNRIATE
ILQCDDVNLRVGVIEKWVAVADICRCLHNYNAMLEITSSLNRSSVFRLKKTWLKVSKQTK
TVIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFS
KMRMISHIIREIRQFQQTAYKIDYQPKVAKYLLDSSSALDEESLYDASLRIEPKTSS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaggtttgagactcaatgatggccacatcacctatctggctcttttggccaag
aaggatgggacgaggcgaggttgcctgagtaagaaaagctcagacaacacaaaatggcat
tcaaagtggttcgctttgttgcagaatatgctattttattttgagaacgactccagctca
cgcccctccggactgtacctgttggagggatgtgtttgtgacagggcaccgtcaccgaaa
ccatctctctcagcgaaggaatgcttagagaagcagtactactttacggtcacattcaat
catgacaaccaaaaggctttggagctgcgcacggaggacgtcaaggactgtgatgagtgg
gtggctgccatcatacaggccagttacaggaacctagctacagagcatgagaccctcatg
cagaagtatcttcatctactccaaatagtggagacggagaaaacggttgccaagcaactt
cgacaacagatagaggatggggaaatcgagatagagcggctaaaatcagagatcgctgga
ctgctcaaggacaatgaaaagatccagtcaaatccagaggtacctcccagtgaagatgac
accgagattaagaagatcaaaaaggtccagagtttcctgcgaggttggatttgccgcagg
aagtggaaaaccatcatccaggactacatccgttcaccccacgctgaaagcatgaggaag
aggaaccaggtggtgtttagcatgctggaggccgaggctgaatatgtccagcaactccac
atcctggtcaacaacttcctgcggccgctccgcatggccgccagctccaagaagccgccc
attactcacgatgatgtcagcagcatcttccttaacagtgagaccatcatgttcctccat
cagatcttctaccagggcctgaaggcccggatagccagctggccgacactggtgctggct
gacctatttgacatcttgctgcccatgctgaacatctaccaggagtttgtgaggaaccac
cagtacagcctgcagatcctggcccactgcaaacagaaccgagacttcgataagctgctg
aagcagtatgaggccaagcccgactgtgaggagaggacactggagacctttctcacttac
cccatgtttcagatccctcgttacatcctgacgctgcatgagttgctggctcacaccccc
catgaacatgtggagagaaacagtttagactacgctaagtcaaaactggaggaactttcc
agaatcatgcatgatgaggtgagtgagacggagaacatcaggaagaacctagctattgag
cggatgattgtggagggttgtgaagttctgctggacaccagtcagacatttgttaggcaa
ggttccctgatccaggtcccgatgagcgagaaagggaagatcacgagaggccgactgggc
tctctgtctctgaagaaagaaggcgagagacagtgtttccttttctccaaacatctcatc
atttgtacccgaggctccggtggaaaacttcacatcactaagaatggagtggtctctctc
attgactgcacactgatggaggagccagaggggacagacgatgagtccaaaggggagcgg
agtgggcaggacacagagcatctggattttaaagtgatggtagagcccaaagacgttcag
ccctacaccatcatcctggtggcttcatcccgacaggagaagacagcgtggacaagtgac
atcagccagtgcatagacaacatccgctgcaatggtctgatgatgaacgcctttgaggaa
aacagtaaagtctccgtgccacagatgattaagtcggacaccagcttgtactgcgatgat
gtcgatatccgcttcagcaagatgatgaactcctgcaaggtgctgcagatccgctatgcc
agcgtggagcgtttgttggagaggctgaccgacttgcgcttcctctccatcgacttcctg
aacaccttcctccactcctaccgcgtcttcactagtgctgacgtagtgctggacaagctc
atcaccatctacaagaagcccatcagtgccatccctgcacgttctttggagcttttcttt
gccagcagccagagcaacaaactcctctatggcgagccacccacgtcgccgcgtgtcagc
cgcaagttctcctcccctcctcctctctccatcaccaagacgtcctcgcctaaccgccgt
cgcaagctttcgctcaacatccccatcatcacagggggcaaagccctggacctggctgca
ctcagctgctctcccaatggctatgcaagcatgcactccaccatgtcacccttcagtaag
accaccctcgacatcaacaagctctatgtgactagcaccgtggccagcaaaatccccgat
gagggagagaccaaagcggaaggcaaagctgaggagtctgtcctcaacaagcaagatctg
tgtgtcagagaggaatgtgatggggagccgagtcagagtgacgaagcagaagcagaaatg
tctcctcccaaatcaccatcaacacccaagaacgtcaagtccaaaaactctgagttttcc
ctgttttccttcaacaatggcatggtggtgtcatcttgccgggagctggacaataaccgc
agtgccctttctgccgcctcggcctttgccattgcaaccgctggtgccaatgaaggcaca
ccaaccaaggagaagtaccgtcgtatgtcgctcgccagcacaggttttcctacagaccag
aggaatggggacaaagagtttgttatcaggagagctgccacaaacagagtcctgaatgtg
ctgcgtcactgggtctccaaacactcgcaggactttgagctgaacacagagctgaagatg
cgggtaattggcttcctggaggaggtgatgcatgacccagagctcctgacacaggaaaga
aaggcagctgccaacatcatcaggactctcactcaggaggaccctggagacaaccaggtc
acgctggaagagatcacgcagatggccatggaggactgtaagactgagccgtttgagagc
cactctgccctggagatagctgagcaactcacactgctcgaccacctggtcttcaaagtc
atcccatacgaggagttctttggtcaaggctggatgaagaatgacaagaatgagagaact
ccctacattatgaaaacaaccaagcatttcaacgatatcagcaacaggatcgccacagag
atcctgcagtgtgacgatgtcaacctgcgagtgggggtgattgaaaaatgggtggcagtg
gctgacatctgtcgctgcctccacaactacaacgccatgctggagatcacatcctctctc
aaccgcagctctgtcttccgcctcaagaagacctggcttaaagtttctaagcagacaaag
actgtgatcgacaagttacagaagctggtgtcatcagaggggcgtttcaaaaacttgaga
gaagctctgaagaactgtgaccctccctgtgttccctacctgggaatgtacctgactgac
ctggccttcatcgaggagggaacacctaactacaccgaggacaacctggtcaacttctcc
aagatgagaatgatatctcacattataagagaaatacggcaatttcagcaaacggcttac
aagattgattatcaaccaaaggttgcaaagtacttgctggacagcagttcagccctggat
gaggagagcctttacgacgcatctctaagaatcgagcccaaaacttcatcatga
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