KEGG   Sander lucioperca (pikeperch): 116060498
Entry
116060498         CDS       T07345                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X2
  KO
K10803  DNA-repair protein XRCC1
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116060498 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116060498 (xrcc1)
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     116060498 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 116060498
NCBI-ProteinID: XP_031169932
Ensembl: ENSSLUG00000009615
LinkDB
Position
10:complement(15308286..15333191)
AA seq 620 aa
MPEIQLKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNLNRVRFFGPNQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGVAFVKFHSPPDKNDPPPTASPKLTKLGQFRVKEEPLSP
AASLQPGSLFFSRDNATKSSTSLKVSPPSERLSYAAAALQAGGSSHSSGQASSSSSASPQ
PPAKRKFEFSKASPGPPPSKKISPAGSPEGKAVTPKHKPSPASTPSPSSAKAAPGQKSAD
RKRESQSKPKPKQPKPSVQQVPFKRMMEGVVFVLSGFQNPFRGELREKALDMGAKYRPDW
TPDSTHLICAFANTPKYSQVKSAGGIIVRREWIMDCHKRKQMISYKRYLMDGAESSSESE
MEGDDQSEEEINTKTPLKKQRQVTPKKTPEKRTEDDEYAGSTDVDEPGDGDDESAVDTED
ELQRVENESRQKKAAAGGKVMKQEDPYGGSTDENTDAEAEEDHPIPELPDFLKGKHFFLY
GKFPNNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHDSFEDALMENGNLNFVKPAW
IYAINERQKILPYQPYSVVP
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgccagaaatccaactcaaacacgtcgtgtcttgcagcaccgaggacactactcacaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcaaggcccggggag
aaacagacatcagtcattctgcagttcgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaagggtcagctttcatcgaggtgctggtggggaattcttcagctgtcagagac
caggactatgaggttcttttggttacgtcttccttcatgtccccaacggagagccgtaac
ggcaccaacttgaaccgggtgcgtttctttgggcccaaccagctgcagaagagcacagca
caggagaagtgggaccgagtgaaaattgtgtgtagccagccatacagcaagaacatagcg
tacggagtggcctttgttaagtttcattcaccgcctgacaaaaatgatcctcctccaaca
gcatccccgaaactgacaaagctgggacagttcagggtgaaggaggagcctctttcacct
gctgccagccttcagcctggcagtcttttcttcagtcgggacaatgcaacgaagtccagt
acttcactcaaagtgtctcctccgagtgagaggttgagttacgctgcagctgccctgcag
gctggtggcagctcccactcatctggccaagcttcctcctccagctctgcctcaccacag
ccaccagcaaaaagaaaatttgagttcagcaaagcttcccccggccctccaccctcgaag
aaaataagcccagctggctcacctgagggcaaagctgtgacccccaaacacaagccgagc
ccagccagcacgccaagccccagcagcgcgaaagctgccccgggacagaagtctgctgac
aggaagcgggagagccaatccaaacccaaacccaagcaaccgaaacctagcgtgcagcag
gtcccattcaaacggatgatggagggggtcgtgtttgtcctcagtggcttccaaaacccc
ttcagaggggagctgagggaaaaggctctggacatgggagccaaataccggcccgactgg
acacccgactccacacacctcatctgtgccttcgctaacacccccaagtacagccaggtg
aaatcagcagggggcatcatcgtacggagagaatggataatggactgccataagaggaaa
cagatgatctcctataaacggtatttgatggatggagcagagtcgagctcggagagcgaa
atggaaggggacgaccagagtgaagaagaaatcaacacaaagactccactgaagaagcag
agacaagtgactccaaaaaagacgccagagaagaggactgaagatgatgagtatgccggc
tccactgatgtggatgaaccaggagatggtgatgatgagtctgcggtggacacggaggac
gagcttcagagggtggagaatgagagcagacagaagaaagcagcagcaggagggaaggtg
atgaaacaggaggatccatatggggggtcgacagatgaaaacacagatgccgaggctgaa
gaggatcaccccatccctgagctaccagacttcctgaaaggaaagcattttttcctctac
ggtaaattccccaacaacgagaggcgccttctgctgagatacatcgttgcctttaatgga
ctgattgaggactacatgacggagaaggtgcagtttgtggtgaccagtgaagggtggcat
gactcctttgaagacgcgctgatggagaacggcaatctgaactttgtcaaacctgcatgg
atttatgcaatcaatgaacgacaaaagatactgccctaccaaccctactcggtcgtcccc
tga

DBGET integrated database retrieval system