Sander lucioperca (pikeperch): 116060548
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Entry
116060548 CDS
T07345
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116060548
03036 Chromosome and associated proteins [BR:
sluc03036
]
116060548
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116060548
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116060548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-C2H2_6
LIM
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
116060548
NCBI-ProteinID:
XP_031170028
Ensembl:
ENSSLUG00000023790
LinkDB
All DBs
Position
3:20017706..20024456
Genome browser
AA seq
759 aa
AA seq
DB search
MEGEVVSMETTQTAALAPEGKVLPEGGEALLQGAVITTQGEVADNMEMMVMDALDPTLLQ
MKTEVLEGGGTMTVTGGDEGQIITLQVVNMEEQTGAALGLGQLQLVHVPVTTATVEGLQA
TYVDASTANKDTDPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQVVRGEVE
EEEEEAEVEATVPQQEQPEWSKDPDYQPITSIRSRGKKGKKSRLRYGEGDRDMDVSVYDF
EEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSH
TDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHE
KPFKCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYE
CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKK
CRYCDAVFHERYALIQHQKTHKNEKRFRCEQCDYCCRQERHMVMHKRTHTGEKPFACSQC
EKTFRQKQLLDMHYKRYHDPNFVPTAFVCGKCNKTFTRRNTMLRHSENCTGEVIEEEENG
TPAPKKARRGRKRKMQARKDDSDDTADELDEIEEEEGLSEIEVEQAPPVVPIPAPVGPPV
KRKRGRPPKSKLDTAAIIRVEDEATGEVDDIIVKKEVGADDLEDGNDEAAEEVVVGGGNP
TIQLEEMSQAEGTAPEMQQSEAPPNGDLTPEMILSMMDR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgaggttgtttccatggagaccactcagactgctgccctggctcccgaagga
aaggtcctgccagagggtggcgaggctttattacaaggggcagtcataactacacagggg
gaggtggctgacaacatggagatgatggtgatggacgctctggatccaactctgctgcaa
atgaagaccgaggtgttggagggcggcggcacaatgacagttactggtggagatgagggt
cagatcatcacactacaggtggtgaatatggaggagcagacaggagctgcattaggtctt
ggtcagcttcagctggtgcatgtacctgtcacaacggcaactgtagaggggctccaggcc
acctatgttgatgcatcaactgctaacaaggacacagatccggttatctgtcacactctt
cctttgcccgagggattccaggtggtaaaagtgggtgccaatggtgaggtagagactgta
gagcaggaggagcttcaggcagcccacgaggagcttcaagtggtgaggggagaggtggag
gaggaggaggaagaggcagaagtagaagccactgtgcctcagcaagaacagccagaatgg
tccaaggacccagactaccagcccatcactagtatccgtagtagggggaagaaaggaaag
aagagccgtctgcgctacggagagggcgatcgtgacatggatgtttctgtgtatgacttt
gaagaagagcagcaggaggggctgctgtcagaagtgaatgctgagaaggttgtgggcaac
atgaagccaccaaagcccaccaaaatcaagaaaaaaggtgtaaagaagactttccagtgt
gagttgtgtagctacacctgtccaaggcgctccaacctggacagacacatgaagagccac
acagatgagagaccacataaatgtcacttgtgtggacgggcctttcgaactgtcacactg
ctgagaaaccacctcaatacacacacaggcactaggccgcataaatgcacagattgtgac
atggcatttgtgaccagtggtgagctggtgcgtcaccgtcgctacaaacacacacatgag
aagcccttcaagtgctccatgtgtgactattgcagcgtggaggtcagtaagttgaaaagg
cacatccgctctcatacaggggagcgacctttccagtgcagtctgtgcagctatgctagc
agagacacttacaagctgaagagacacatgaggacacattcaggtgaaaagccatacgag
tgctacatctgccatgcacgtttcacacagagcggcaccatgaagatgcatattctgcag
aaacacacagagaacgtagccaagttccactgcccacactgtgatactgtcatcgcacgc
aagagcgaccttggtgttcacttgcggaagcagcactcatttattgagaagggaaagaaa
tgtcgttactgtgatgctgtgtttcatgaacgatacgctctcatccaacaccagaagact
cataagaatgagaaacgcttccgctgtgaacagtgtgactactgctgcagacaagaacgc
cacatggtaatgcacaaacgtacacatacgggggagaagccgtttgcctgcagccagtgt
gagaaaacatttaggcagaagcagcttctggacatgcactacaagcgctaccatgatccc
aactttgtccccactgcctttgtgtgtggcaagtgtaacaagacgttcacccgcaggaac
acaatgctgcgtcactctgagaactgcacgggtgaggttatagaagaagaagaaaatgga
actcctgcacccaaaaaggctcgtcggggcaggaagaggaagatgcaggccaggaaggac
gatagtgatgacacagcggatgaactggatgagatagaggaagaagaggggctaagcgag
attgaggtggaacaggccccaccagttgtccctatcccagcccctgtggggccaccagtg
aagaggaaacgtggacggcccccaaagagcaaactagacacggctgctatcatccgtgtg
gaggacgaggccactggagaggtggatgacataattgtgaagaaagaagttggagctgat
gacctggaggacggcaacgatgaggctgcagaggaggtggtggtcggtggagggaatcca
accatccagctggaggagatgtcccaggcagaggggacagcaccggagatgcagcagtct
gaggccccaccgaacggagacctcactcctgagatgatcctcagcatgatggaccggtga
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integrated database retrieval system
