Sander lucioperca (pikeperch): 116060653
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Entry
116060653 CDS
T07345
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116060653 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116060653 (cstf3)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
116060653 (cstf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
116060653
NCBI-ProteinID:
XP_031170211
Ensembl:
ENSSLUG00000012145
UniProt:
A0A8C9YTE9
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All DBs
Position
3:complement(18174151..18186435)
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AA seq
716 aa
AA seq
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MATEGTADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSTS
ELKALGYKDVSRAKLAAMLPETVVTPSAPSLKDEADRKPEYPKPDTNQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVLLMKLLPPPTCFTGPFVQVDEIMETFRRCTLPETVDAAVELIT
GRQPDAGGEGNGSMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagggaacagccgaccaggcagcggcagagtatattccagagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgacttgtcacg
cagttcccaagttctggcagattctggaaactgttcattgaagccgagatcaaggcaaaa
aactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtcttgcacatcgac
ctgtggaaatgttacctctcatatgttcgagagaccaaagggaagctgcccagctacaaa
gagaagatggcccaggcgtatgactttgccctggataaaattggcatggaaattatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagttgaggcggtgggctcgtac
gcagagaaccaaagaatcactgcagtacggcgggtgtaccagagaggctgtgtgaacccc
atgatcaacattgagcagctctggagggattatagcaaatacgaggagggaatcaatgtg
cacttggccaaaaagatgattgaggaccgaagtagggactacatgaatgccaggagagtg
gcaaaggagtatgagactgtgatgaaggggctggacaggaatgcaccatcagtaccgccc
cagaactcccctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggaa
aaaagcaacccgctgcgcacagaagaccagaccctcatcacaaagagagtgatgtttgcc
tatgagcagtgcctgctggtgctgggccaccatcctgacgtttggtacgaggcagcacag
tacctggagcagtctagcaaactgctggcagagaaaggggatatgaataattccaagctg
tttagtgacgaggcagctaacatctacgaacgtgccatcgggactcttctgaagaagaac
atgctgctgtacttttcattcgcagactacgaagaaagtcgcatgaagtacgagaaggtc
cacagcatctataacaaactgctggccattgaggacatcgaccccacgctggtctacatt
cagtacatgaagtttgccaggagggcagaagggatcaagtcaggtcgcaccatcttcaaa
aaagccagagaggatctacgcacgcgtcaccatgtgtatgtgacggcagcactgatggag
tactactgcagcaaggataaatcggtagccttcaagatttttgaacttggtttgaagaaa
tacggggacattccagagtacatactggcatacatcgattacctctcacaccttaacgag
gataacaacaccagggttctgtttgaacgtgtcctcacctcaggaagcttgtcgccagaa
aagtcaggcgagatctgggctcggttcctggcttttgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgtttcactgccttcaaggacgagtatgagggcaaa
gaaacagccttgctggtagatagatacaagttcatggacctgtatccctgctctactagt
gaacttaaggcccttggatacaaggatgtgtcgcgtgccaaactggcagcaatgctccca
gagactgtggtgacgccctctgcgccttcactaaaggatgaagctgaccgtaaacccgag
taccccaaacctgacaccaatcagatgatccccttccagccacgtcaccttgcccctcca
ggtttacaccctgtccctggtggagttttcccagtccccccagctgctgttctcctaatg
aagctgctccctccgcctacgtgcttcactggaccttttgttcaagtggatgagatcatg
gaaacattcaggagatgcacacttcctgagactgttgatgctgctgtagagctgatcact
ggtagacagcccgatgcaggaggggagggcaatggatccatggagaaccatgctgttgcc
aagtcactcaagaggcctaacgcagactccgacgaggaggatgacaaaggagctgtggct
ccgcccatacacgacatttaccgtgcacgccaacagaagaggattcgataa
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