Sander lucioperca (pikeperch): 116060779
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Entry
116060779 CDS
T07345
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sluc04054
]
116060779
Pattern recognition receptors [BR:
sluc04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
116060779
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
LRR_9
TIR_2
LRR_14
LRR_1
LRR_LRWD1
LRR_NXF1-5
LRRNT
LRR_EndoS
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
116060779
NCBI-ProteinID:
XP_035850207
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Position
17:27760446..27776604
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AA seq
947 aa
AA seq
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MQYTGSWPLFLVPLLSFLLHYNPLLAFSLKNCTINYSEDANNLWVTCRQRSLTAIPDDIP
RNASSLDLGSNSISKITRRDLKYLPKLTYAELGFNLISHIDDGAFADLEKLKFLSLSSNK
LSKVTDNMFQGLSELVLLSLQRNRISYISPVAFQALVSLEQLDLGSNYLQQITDVAPIFK
LPTLNKLSLGNNKFTSFQSDDLPLNVSNIKTVLLTLNPLRKFSLTKDVFPHLWSLELIKC
SSNIEWDVSNKTFLRNLTSLALGGIDISFESYRAVLQTTDSLQKLFLTSMKARIDEGLID
VACQIPSLRTLDLQNNCIVRVDDNLLQSCSQITDLSLSSNKLSEMSEHSLRSISQLRHLD
LGYNQLSKVPLTLRGLSTLETLDLSSNYITELNCNTFLNLTRLTTLNLNQNLISKIKGCV
FQNLNDLIEVNIGDNALFTFDNTFKVSLQKLESLNLHNNGLLQLMPEDFSNLSSLRSLDL
EKDTYYNVYEGAFQGLDNLQTLSITPGHYRKEMFIGLAQLENLTLHLTLDWKLKSSQQND
YSPFSNLPNLKKLILKVYNTFLVQDITQDLLKGLKSLESLTSDNFFRKLLHPDTFKHTPR
LKVLQIINSDLSHLTPELFWQIPNLQRLDLSNNKLRYLDFLGGANLLTLRWLKLNGNELS
VINETALQCLPALMYLDLNNNPLTCECSNVGFNQWVQSNNQTQVVNGHQYTCAFPVSQKG
NKFLDFDTSSCWIDAGFFCFIFSTCLVLFTLLASFIYHFLRWHLAYAYYLFLAFVYDKRR
GRKGSPHHYDAFVSYNVYDEAWVYEEMLPVLEGEQGWRLCLHHRDFEPGKPIVENITDAI
YGSRKTICVISRHYLQSEWCSREIQMASYRLFDEQDDVLILVFMEDIPACELSLYYRMRS
LAKRRTYLSWPKAGQHTGVFWQNIRRALMTPGSPTDNPIRGFFQNQE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatacaggaagttggcctctgttccttgttcctcttctgtctttcctgcttcat
tacaacccattactggctttttcactgaaaaactgcacgattaactactctgaagatgca
aataatctgtgggttacatgcagacagcgcagcctcactgctattcccgacgacattccc
agaaatgcatcatcactggatctcggctcaaacagcatttcaaagatcaccaggagagat
ttaaaatatttaccaaagctcacctatgcagagttgggatttaatttgatttcccacatt
gatgatggagcttttgcagacttggagaagttaaagttcctctctctgtccagcaataag
ctttcaaaagtgacagacaacatgtttcaaggactgtccgaactagtcttgctatctctg
cagaggaaccgtatcagttatatctcccctgtggcctttcaggccctggtcagcttagag
caattagatctgggctctaattacctacagcaaatcacagatgttgctcccatctttaaa
ctaccaactctaaataagttgtctcttgggaacaacaagttcacctcttttcaatcagac
gacctgcctttaaacgtctcaaacataaagaccgtgttgctgactttgaaccctctgaga
aagttcagtcttacaaaagacgtctttcctcatttgtggtctctcgagttaattaagtgt
agcagcaacatcgaatgggacgtatcaaacaagacctttctgagaaacctaactagtttg
gccctaggtggaattgatattagttttgagtcgtaccgcgcggtgctgcagaccactgac
tcactacaaaaactttttctgacgtcgatgaaggcgaggatagatgaaggtctcatagac
gtcgcctgccaaattccttctctaagaactcttgatttacagaataattgcattgtcagg
gtagatgacaacctgctgcagtcttgttctcagatcactgatctcagtttatcttctaac
aagctgtccgagatgtcagagcattcactcagatcgatttcacagctcaggcatctggat
ttgggctataaccaactgtccaaagtgcccctcacactcagaggactctccacactggaa
accttggatctgagctccaactacatcactgaactcaactgcaacactttcctgaatttg
acaagattaacaacgcttaatctcaaccaaaatctcatttcaaaaattaaaggatgtgtt
tttcaaaacttgaacgatttgatagaagttaatattggagacaatgctctttttactttt
gacaataccttcaaggttagcttgcagaaactagaatctttgaatttacacaataatggt
ctcttacagctcatgccagaagactttagcaacctgtcctccctccgttctttggattta
gaaaaagacacatattacaatgtgtatgaaggggctttccaaggacttgataatcttcaa
actcttagtattacacctggacattacagaaaagagatgttcataggactcgcacagtta
gagaatctgacattacatcttaccttagattggaaactgaaaagttctcaacaaaatgat
tattcacctttctcaaatttaccaaacttgaagaagcttatactcaaagtttacaacaca
tttcttgttcaggacattacacaagatctgctcaagggccttaaatctttagagagctta
acatctgacaatttcttcaggaagttgttgcacccagacacatttaaacacactccccga
ctgaaggttcttcagataataaacagcgatctgtcacatttaacccctgaactgttctgg
caaattccaaacttgcagagactcgatctctccaacaataaattaagatatttggatttc
ctcggcggggcgaacctgctgaccctcagatggctaaaactcaacgggaatgagttgtcg
gtcatcaacgaaacggccctccaatgcctccctgcgttgatgtacctggacctgaataac
aaccctttaacgtgcgaatgctccaacgttggcttcaaccagtgggtgcaaagcaacaac
cagacgcaggtagttaatggccaccagtatacttgtgcctttcctgtgagccaaaagggg
aacaagttcctggactttgacactagctcctgttggatagacgctggcttcttctgcttc
atattcagcacttgtctagttctgtttactctcctcgcatcattcatttaccatttcctg
aggtggcacctggcctacgcctactacctctttctggccttcgtctacgataagaggagg
ggaaggaagggctctcctcaccactacgatgcttttgtctcctacaacgtttacgatgaa
gcctgggtctacgaagagatgcttccagtgctggagggggagcaaggatggagactctgt
ctgcaccacagagacttcgaaccaggtaagcccatcgtagaaaacattacagacgccatc
tacggcagcaggaagaccatctgtgtgatcagccgacactacctgcagagcgagtggtgc
tccagagagatccagatggccagctaccgtctgtttgacgagcaggacgatgttctgatc
ctggtgtttatggaggacatccctgcttgcgagctctctctgtactaccgaatgaggagt
ctggcgaagagacgcacctacctgagctggccgaaggccggtcaacacacgggagtcttc
tggcagaatatacggcgagctctgatgacacctggaagtcccacggacaacccaatcagg
ggtttctttcagaaccaggaatga
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