Sander lucioperca (pikeperch): 116061093
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Entry
116061093 CDS
T07345
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04145
Phagosome
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116061093
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116061093
09144 Cellular community - eukaryotes
04510 Focal adhesion
116061093
09142 Cell motility
04820 Cytoskeleton in muscle cells
116061093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116061093
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116061093
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116061093
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Phagocytosis
Opsonins
116061093
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116061093
Exosomal proteins of colorectal cancer cells
116061093
Exosomal proteins of bladder cancer cells
116061093
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116061093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
TSP1_CCN
EGF
Motif
Other DBs
NCBI-GeneID:
116061093
NCBI-ProteinID:
XP_031170849
Ensembl:
ENSSLUG00000016833
LinkDB
All DBs
Position
22:complement(19070077..19078633)
Genome browser
AA seq
796 aa
AA seq
DB search
MCVYVYKDNEDGWSPWSEWTHCSVSCGRGGQQRGRSCNGIMPSCAGPSVQTRSCMLMKCD
HKAHPNGNWGLWSPWSGCTTTCGEGNITRVRLCKKPPAQKGGRGCTGSARETQSCNNTLC
PIAGGWTSWTEWSLCSESCGGGLKSRQRECLNPAPQHGGKPCAGDAVDYESCNKQPCPID
TCLFSNPCFPGVVCTSYSDGSWECGRCPLGLNGNGTHCEDENECEVENVCVTECVNTDPG
FYCLPCPPRHKGTQPYGLGLEMAQKTRQVCDPYNPCKDNTHTCHKYAECKYLGLASEVLY
KCVCAVGFAGDGFLCGEDSDLDGWPNSKLTCKQNATYRCQKDNCPMLPNSGQEDLDKDGQ
GDACDPDDDNDDIMDERDNCPLVYNPRQFDSDRDGVGDRCDNCPFDSNPLQTDTDDDGEG
DACSIDIDGDEVLNDRDNCPLVYNTDQRDTDLDGVGDQCDNCPLLHNPLQLDSDSDLVGD
MCDNNDDIDEDGHQNSLDNCPYIANSNQADHDKDGKGDVCDHDDDNDGIPDDRDNCRLVP
NRDQLDSDGDGSGDACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLLDPKGTTQSD
PLWVIRSQGTELMQTANSDPGIALGYDKFSAVDFSVTFYVNTNRDDDYAGIVFAYQSSRR
FYVVMWKQVSQAYWEKKPFKAFATAGVSIKLVNSTTGPGEYLRNALWHTGNNRHQVKTLW
HDPNKIGWKAYTAYRIHLIHRPKTGFIRVVVYEGREILSDSGAVYEHTLAGGRLGLFVFS
QEHVLFSDLKYECRDN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatgtatataaagataatgaagatggctggtccccgtggtctgagtggacg
cactgttcggtctcctgtggacgtggagggcagcaaaggggtcgctcctgcaatggcatc
atgccgtcctgtgccggcccgtcagtccaaacccgcagctgcatgctgatgaagtgtgac
cacaaggcgcatcctaatgggaactggggcctttggtctccttggtctgggtgtacaacc
acatgtggagaaggcaacatcacacgggttcgtctctgcaaaaaacctccagcacagaag
ggaggcagagggtgcacgggcagcgccagggagacacaatcttgcaacaatacactctgc
cccattgctggaggctggacaagctggacggaatggtctctgtgctcagagtcgtgtggt
ggaggtcttaagagtcgccagcgggagtgtttgaaccccgcccctcagcacggtgggaag
ccttgtgctggagacgctgtggactatgaatcatgtaacaaacaaccatgtcctatagat
acatgtttgttttcaaatccatgttttcctggagtggtgtgcacatcatatagcgatgga
tcatgggagtgtggacgttgtccgttgggtttaaatggcaatggcactcactgtgaagat
gagaacgagtgtgaagtggagaatgtgtgtgtcacagagtgtgtaaacacagaccctggc
ttctactgtctgccctgtcctcctcgccataaaggcacccagccgtatggccttggactg
gagatggcccagaaaaccaggcaggtgtgtgatccatacaatccttgcaaagacaacaca
cacacctgccacaagtatgctgagtgtaagtacctgggcctggcgtctgaggttttgtac
aagtgtgtgtgtgctgtcgggttcgcgggtgacggcttcctgtgtggtgaagactctgat
ctggatggctggcccaacagcaaattaacctgcaagcagaatgcaacctatcgctgtcaa
aaggataactgccccatgctaccaaactctggacaggaagacctggacaaggacggacag
ggagatgcctgtgatcctgatgacgacaatgatgacatcatggatgagagggacaactgc
ccgctggtgtacaaccctcggcagtttgactctgacagagacggggtcggggaccgctgt
gacaactgtccgtttgatagcaacccgctgcagactgacactgatgacgatggagaggga
gacgcctgcagcattgacattgatggagatgaggttttgaatgatcgtgacaactgtccc
ttagtctacaacactgatcagagggacacagacctggatggtgttggagaccagtgtgac
aactgtccccttctacacaacccactgcagcttgactctgacagtgacctggtcggggac
atgtgcgacaacaacgacgacatcgatgaggacggccaccaaaactctcttgacaactgt
ccctacattgccaatagcaaccaggccgaccatgacaaggacgggaagggtgacgtctgt
gaccatgatgatgacaacgacggtatccctgacgaccgggacaactgcagactagtgccc
aacagggaccagctggactctgatggtgatgggagcggagatgcatgctttgatgacttt
gacaatgacagtattccagatgcgctggatccatgtccgctgaaccaggatatcgggtct
acagacttcaggaagtttcaagttgttttgttggaccctaaaggcaccacgcagtcggac
cctctctgggtgatccgcagccaaggcacggagctgatgcagacggccaactcagaccct
ggcatcgctttaggatatgacaagttcagcgcggtggacttcagcgtgacattttatgtg
aataccaaccgagatgacgactacgcaggcattgttttcgcctaccagtccagtcgacgc
ttctatgttgtcatgtggaaacaggtgtctcaggcctactgggagaaaaagccatttaaa
gcttttgccacagccggagtctcgatcaaactggtcaactccaccacgggaccgggagag
tatctacgcaatgccctgtggcacactggaaacaacagacaccaggtcaaaacattgtgg
catgaccccaataaaattggctggaaggcctacacagcctaccgcatacaccttatccac
agacccaagactgggttcatcagggtggtggtgtacgagggcagggagattttatctgac
tctggggcggtgtatgaacacaccctggctggaggcagactggggctgtttgtcttctct
caagaacatgtcctcttctcagacctcaaatatgagtgcagagataactga
DBGET
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