Sander lucioperca (pikeperch): 116061190
Help
Entry
116061190 CDS
T07345
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X5
KO
K07377
neurexin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116061190 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116061190 (nrxn1a)
Membrane trafficking [BR:
sluc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
116061190 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Prokineticin
Motif
Other DBs
NCBI-GeneID:
116061190
NCBI-ProteinID:
XP_031171023
Ensembl:
ENSSLUG00000012999
LinkDB
All DBs
Position
22:19144273..19204333
Genome browser
AA seq
1497 aa
AA seq
DB search
MSVMAVCVWAAAPLVFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCAEPAELQSGVAVSDGHWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTYMGGVTPELHSSPLRLTSPSVREHPA
FRGWITAVSVNGSLATLESSEGVTVTAGCEPDHQCQNGGVCSVVNDQAVCDCSNTGYQGN
DCSEEHSYTPGLAHLMIGDQGKLRAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFK
TLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVT
RNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNN
FMGCLKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESFVAL
SKWSAKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTLKVDFFAIEMLDGHLY
LLLDMGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDE
TLYLGGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPS
CSREPPKQCLSNPCQHNGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQL
PMAMHTAAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTA
SKGPETIFAGSGLNDNEWHTVRVVRRGKGLKLTVDDLQPVEALTSELTPPPGQMAGDHTQ
LEFHNVETGIVTEKRFMPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKS
IVADPVTFRSRSSFVTLPTLQAYYSMHLFMQFKTTSPDGLVLFNRGDGNDFIVVELVKGY
LHYISDLGNGAHLIKGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLD
LKGDLYIGGVSKEMYRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCE
GPSTTCQEDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGLVVYTWPP
NERPSTRADRLALGFSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIE
ESSKFVNDGKYHIIRFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRV
VDDWLLDKGRQLTIFNSQTTVRVGGGEREGMFQGQLSGLYYNGLRILNMAAEGHPHIRVE
GSARLVGDMPSSSITPQSSAAAGGNRSDSAPSTSDITTTTATNRKQGATQQSADDLLVAS
AECPSDDEDIDPCDPSSARPPLPEVKVFPGPSEVVRESSSTTGMVVGIVAAAALCILILL
YAMYKYRNRDEGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaatggctgtgtgtgtttgggcagcagcccccctggtcttcctggggctgtgc
ctgtgcagcgtggggggccaggcccaaggggaggtcctggagtttggaggcgtgtccagc
cagtgggggcgattcccagtgtggaacgcctgctgcgagagtgtgctgagcttcagcctg
cggactcacagccaggagggccttctgctctacctggatgatgagggcttctgcgacttc
ctggagctgctgcttctccatggccacctccgcctgcgcttctccatcttctgtgctgag
ccagcagagctgcaatcaggtgtggcggtgagtgatgggcactggcacgcagtgcgtgtc
aagcgggactggaggaacacttcgttggaggtggatgggcgactggagggatgggcggaa
gtgaagagcaagagaagagacatgacagtattcagccacacctacatgggcggggtgacg
ccagagctccactcctcgccactgcgtctcacatccccttcggtacgggaacaccctgcc
tttcgtgggtggatcacggcggtgagcgtcaatggctcactggcgacgttggaaagctca
gagggcgtcacagtaacagctggctgtgagccggatcaccagtgccaaaacggaggggtg
tgcagcgtggtcaacgaccaggccgtctgtgactgctccaacaccggttaccaaggcaac
gactgcagcgaagagcacagctacactccaggtctggcacacctgatgattggcgaccaa
ggaaaactcagagctcgcgaggagtatgttgccaccttcaagggctctgagtacttctgc
tacgacttgtcgcccaaccccatccagtctagcagcgatgaaatcacgctctccttcaag
acgctgcagcgcaacggcctgatgctgcacaccggcaagtcagccgactacgtcaaccta
gcactgaagaacggagccgtgtcacttgtcatcaacctcggctccggggccttcgaggcc
ttggtggagcctgtcaatggcaagttcaacgacaacgcctggcacgacgtcaaggtcacc
cgcaacctgagacagcactcaggcattggacacgctatggtgaccatctctgtggacggc
atcctgaccaccacaggctacacccaggaggactataccatgctgggctctgacgacttc
ttctacgtgggagggagccccagcactgctgacctgcccggttctccagtcagcaataac
ttcatgggctgtctcaaagaggtggtgtacaagaacaatgatgtacggttggagctgtct
agactggctaaacagggagacccaaagatgaaggtaagcggggtagtgtcttttaagtgc
gagagtgtggccacgctggaccccgtgacctttgacaccccagagtctttcgttgcacta
agcaaatggtcagcgaagaaggcgggatcaatctcattcgacttcaggaccacagagcca
aatgggttgatgcttttcagccatggcaaacccagacagcagcaacgcaaggacccacgc
acgcctcctacactcaaggtggatttctttgccattgagatgctggatgggcacctttac
ttgctgctggacatgggctcaggaaccaccaagaccaaggctatcgacagaaaggtcaac
gacggagaatggtatcacgtggacttccagagggacggacgctcaggaaccatctcggtg
aacagtgtgagaacagcgtacacagctccaggagacagtgagatcctggacctggatgag
actttgtacctcggaggactacccgaagaccgcgctggactcatcttccctacagaggtg
tggacggctctgttgaactatggttatgtgggctgcatcagagacctgtttgtggacggg
cagagcaaagacatccggcggctggcggaggcccagagggcggtgggggtgaagccctcc
tgctcgagagagccgcccaaacagtgcctgtccaacccctgccagcacaacggcatttgc
agggagggctggaatcgctacgtctgcgactgctctgggacgggatacctgggacgctcc
tgtgagagagatgcgactatcctgtcgtacgacggcagtaagtttatgaaggtgcagttg
cctatggcgatgcacaccgcggcggaggacgtctcgctacgctttcgctcccagcgggcc
tatggcgttctcatggcaaccacatcccgtaactccgcagacactcttcgtctggagctg
gatgggggccgtgtcagactcaccgtcaacctagactgtatcaggataaactgtacagcc
agtaaaggcccagagaccatctttgcggggtcgggcctcaatgataatgagtggcacaca
gtgagggtagtccggcgtggcaagggcctcaaactcaccgtagacgacctgcagcctgtt
gaagccctcacctctgagcttaccccgccaccaggtcagatggcgggcgaccacacccag
ttggagttccacaatgtggagacgggtattgtgacggagaaacgcttcatgcctgccgtg
ccctccaatttcatcggccatcttcagggcctgacgctgaacggcatgccctacatcgac
ctgtgcaagaacggtgacatcgactactgcgagctcaacgctgttattggctataagagc
attgtggctgaccccgtcaccttccgctcgcgctccagtttcgtcacactgcccacactg
caggcctattactccatgcatctcttcatgcagttcaagacgacatcgcccgacggcctt
gttctcttcaacaggggggacggcaatgacttcatagtggtagagctggttaaaggctac
ctacactacatctctgacctgggcaatggagcacacctgatcaagggcaactctaacagt
cccctaaacgacaaccactggcacaacgtgcacatatccagagacactaacaatctccac
acggtcaagattgacaccaaagtcactacgcagaccaccatgggcgccaagaacctcgac
ctaaagggtgacctgtacattgggggcgtctccaaagagatgtaccgagacctgcctaag
ttggtccactcccgcgagggattccagggttgcctagcaacagttgatctaaatggccgg
ctccctgaccttttggctgatgcactggcaaccatgggacaagtagagagaggctgtgaa
ggccccagcactacatgtcaagaagactcttgctcaaatcagggagtttgtttgcagcag
tgggaaggcttcacctgtgactgcagcatgacgtcatatgctgggccactatgcaatgat
gctgggaccacttatatatttggccgtgatggaggtttggtggtttacacgtggccccct
aatgaacgtcccagcaccagggcagaccggcttgccctcgggttcagcacccaacagaaa
cacgccattctgctccgggtggacagcgcgtctggcctgggagattaccttcagcttcag
atcgacaaaggcaacattagagtagtgtttaatgttggcactgatgacatcaacattgag
gagagctccaagtttgtcaacgatggaaagtaccacataattcggttcacccgcagcgga
ggcaatgcaaccctccaactggacgacctgccagtcatagagcgctatccctcaggcaac
attgataacgagcgcctggccatcgccagacagcgaatcccctatcggctcggtcgagta
gttgacgattggctactcgacaaaggtcgccaactgaccatcttcaacagccagacgaca
gtgcgtgttggtggaggtgagcgtgaaggtatgttccagggccagctttctggactctac
tacaatggcctccgcatcctcaacatggccgctgaggggcacccccacataagagtggaa
ggaagcgcacgactggtcggcgacatgccgtcctcctccatcaccccgcagtccagtgct
gcagcgggaggcaaccgctctgactccgccccctccacaagtgacatcacaaccaccacg
gccaccaacaggaaacagggggccacacagcagtcggcagacgacctgctggtggcgtca
gctgagtgtcccagcgatgatgaagacattgacccctgtgaccccagttcagcccgccct
cccctgccagaggttaaggtgttcccaggtccatctgaggtggttcgggagagcagcagc
actacaggtatggtggtgggcatcgtggcggctgcagccctctgcattctcatcctcctc
tatgccatgtacaagtaccgcaaccgcgacgagggctcctaccacgtggatgagagccgc
aactacatcagcaactcagccacacagcccaacggcagcgccaaggacaagccgctgggg
atcgccaagatctccaagaacaagaagaacaaagacaaggagtactacgtctga
DBGET
integrated database retrieval system