Sander lucioperca (pikeperch): 116061245
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Entry
116061245 CDS
T07345
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03020
RNA polymerase
sluc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116061245 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116061245 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116061245 (polr3a)
Enzymes [BR:
sluc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116061245 (polr3a)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116061245 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
116061245
NCBI-ProteinID:
XP_031171178
Ensembl:
ENSSLUG00000007032
UniProt:
A0A8C9XUQ2
LinkDB
All DBs
Position
22:17532669..17556434
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAQKISHICFGIKSAEQMRQQAHIQVVSKNLYSQDTKHTPLSYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
DKLQFMDLLKRPNLAYLQKRGLKKKISDKCRKKTICLNCSAFNGPVKKCGLLKIIHEKYK
TNKKVVDVFVSDFLQSFDTAIEHNKVVEPLLSRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELLRKRVRNGPEVHPGANF
IQNRHTQIKRFLKYGNREKIAQELRFGDVVERHLMDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKTCQIVASILVGKDEKIRICLPRPAIMKPIALWTGKQI
FSLILKPSKECPVKANLRTKGKQYCGKGEDLCHNDSYVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVFLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALSTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDVIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNMRAVYVCPDEPALSQNELVLTADVIMKRADFLC
CRETFLEEIKNFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQSLKEELPKVV
VQGIPEVSRAVIHIDEQSSKTMYKLLVEGDNLRSVMATHGVNGNRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRQPSPVKRPLLFD
SADFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagacagatgtagcccaaaaaataagccacatctgcttc
gggatcaaatctgctgaacagatgcgtcagcaggcccacattcaggtggtcagtaagaat
ctgtacagccaagacaccaaacacactccactgtcctatggagtgttggaccaccgtatg
ggcaccagtgagaaagacagaccatgtttaacatgtgggaagaatctggcagattgtttg
ggacattacggctacttggatctggagctgccatgttttcacgttggctatttcaaagcc
acaataggaatcttacagatgatttgcaagacatgctcgagcataatgctgacgaaagag
gacaaactgcagttcatggatttattaaaaagacccaacctggcctatctccagaaacga
gggttgaagaagaagatctctgataaatgccgcaaaaagacaatctgtttgaattgttct
gcttttaatggaccagtgaaaaagtgtggccttcttaagatcatccatgagaagtataaa
acaaacaagaaggtggtggatgtttttgtgtcagatttcctgcagtcctttgatactgcc
attgagcacaacaaagtggtggaacctctgctgtccagagcacaggaaaacctgaaccct
ctggtggtgctaaacatgttcaagaggattccccaagaagacattcccctgctgctgatg
aaccctgaggcggggaaacctgcggaccttattctcacccgcctcctggtgcctcctctc
tgcatacgaccatctgtggtcagcgacctaaagtcaggtaccaatgaggacgacctcacc
atgaagctcacagagataatcttcctcaacgatgtcatcaaaaagcatcgtatgacaggg
gcgaagacccagatgatcatggaggactgggacttccttcagctgcagtgtgctctatac
atcaacagcgagctttctggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgtgcagagacttaaggggaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctggcagaactgtcatttctcccgacccaaacctgaggatcgatgaggtg
gccgtccccgtgcatgtggccaaaatcctgacgtacccagagagggtgaacaaagccaat
ctggagttactgaggaaacgggtccgcaatggtcctgaggttcatcccggagccaacttt
atccagaatcgtcacactcagataaaaaggtttttaaaatatggaaaccgtgagaagata
gctcaggagctcaggtttggtgatgtggtggagaggcacttgatggacggagacatcgtc
ctcttcaatcgacaaccctccctgcacaaactcagcatcatggcccacatcgccagagtc
aaacctcacaggacgtttcggttcaacgagtgtgtgtgcaccccttacaatgccgacttt
gacggtgatgaaatgaaccttcatctacctcagactgaagaagccaaagctgaggccctc
gttctaatggggacaaaagcgaatcttgtcactccgagaaatggcgaacctctgattgct
gctattcaagactttctgacaggtgcctacctcttgacgctgaaggacactttctttgac
agatcaaaaacctgtcagatagtggcatcaatccttgtgggcaaagatgaaaaaataagg
atctgtctcccccgcccggctatcatgaagcccattgctctttggacgggcaaacagatc
ttcagcctcattctgaagccgagtaaggaatgtcctgtcaaggccaacctgcggaccaag
ggcaaacagtactgtggcaagggagaggatctctgtcacaacgactcatacgtggtgatt
cacaacagtgagctgatgtgtggtagcatggacaagggcactttggggtccggctccaag
aacaacatcttctacatcctgctaagagactggggacagctggaggctgctaacgccatg
tcccgcctcgcaagactcgctccggtgtttctctccaaccgtggcttttctattggcatt
ggtgatgtgacacctggccagggtctgctgaaggccaagcaggacttgctggatgacggt
tacaaaaagtgtgacgaatacatcgaagctctatccacgggaaagctgcagcagcagcca
ggttgcacagcagaggagactctggaggctctcattttgagagagctgtccgtcatcaga
gaccgagctggtagtgcctgcctcagggagcttgacaagagcaacagccctctgatcatg
gctctttgcggctccaaaggatctttcattaatatctctcagatgattgcctgtgtgggc
cagcaggccataagtggctctcgagtacctgatggttttgagaaccgctccctgcctcac
tttgaaaagcactcgaaactgcctgctgctaaaggctttgtggccgacagcttctattct
ggcctgacgcccacagagtttttctttcacaccatggctggccgggagggtctggtggac
actgctgtaaaaacagcagagactggatatatgcagagacgtttggttaagtccctggag
gatttgtgctcacagtacgacctgacagtacgcagctccactggcgacgtcatccagttt
atttatggcggcgatggtctggatccagctgccatggagggaaaggatgagccgctggag
tttaagagagtcctagacaacatgcgggcggtctatgtgtgtccagacgagccagcactc
agtcaaaacgagctggtcctcactgctgatgtcatcatgaagagagctgacttcttgtgc
tgcagagagaccttcttggaggagataaagaactttattaagagcatctcagaaaggatc
aagaagaccagagacaagtacggcatcaacgacaatggcaccagcgagccaaaagttctt
tatcagctggaccgcataacccccacccagctggagaagttccttgaaacctgcagagac
aagtacatgagagctcagatggagccaggctcagcagtaggggccctgtgtgcccagagc
atcggagagcccggtactcagatgaccctgaaaaccttccactttgctggtgtagcgtcc
atgaacatcactctgggggtgcctcgcatcaaagagatcatcaatgcctccaagaacatc
agcacccctataatcactgctcatttggatgtggaagacgacgctgactttgccaggctg
gtgaagggaaggatcgagaaaactcttctaggagagatttctgagtacatagaagaggtt
tttctaccagacgactgtttcatcctggtgaaattgtcactggagagaataaggctgctg
cgactggaggtaaatgcagaaacagtgcgttactccatttgcatgtctaaactacgagtg
aaaccaggggacatcgctgtgcacggcgaggcggtggtgtgtgtgtctccacgagagaac
aacaaaagctccatgtactacgtgctgcagtcactaaaagaggaacttcctaaggtggtg
gttcaaggaatacctgaagtctcccgagctgtcattcacattgacgaacagagcagcaag
accatgtacaaactcctggtggagggggacaacctgagatctgtcatggcaacacacgga
gtgaatggaaacaggaccacgtcaaacaacacctatgaggttgagaagacgttgggtatt
gaggcagctagatccaccatcatcaatgagatccagtacaccatggtgaaccatggaatg
agcattgaccggcgccatgtcatgcttctagcagatctcatgtcctacaagggggagata
ctgggaatcaccaggtttggtttagccaaaatgaaggagagtgtcctcatgctggcctcc
ttcgagaaaacagcggatcatctcttcgatgctgcctacttcggacaaaaggactcagtc
tgtggtgtgtctgagtgcatcattatggggatacctatgaatatcggaacaggactgttt
aaactcctacacaaggctgacaggcagccctctccagtcaaaaggcctctgctctttgac
agtgccgacttccatatacctctaatcacatag
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integrated database retrieval system
